bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
49,011,213 sequences; 17,563,301,199 total letters
Query= Contig-12_CDS_annotation_glimmer3.pl_2_2
Length=136
Score E
Sequences producing significant alignments: (Bits) Value
gi|490418710|ref|WP_004291033.1| hypothetical protein 59.7 1e-08
gi|496050830|ref|WP_008775337.1| hypothetical protein 58.2 3e-08
gi|547226429|ref|WP_021963492.1| putative uncharacterized protein 57.0 8e-08
gi|515877281|ref|WP_017307864.1| hypothetical protein 41.2 0.084
gi|494822883|ref|WP_007558291.1| hypothetical protein 39.7 0.13
gi|635365037|emb|CCI46569.1| unnamed protein product 38.5 0.73
>gi|490418710|ref|WP_004291033.1| hypothetical protein [Bacteroides eggerthii]
gi|217986637|gb|EEC52971.1| hypothetical protein BACEGG_02722 [Bacteroides eggerthii DSM
20697]
Length=155
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 59/106 (56%), Gaps = 6/106 (6%)
Query 1 VTSEMLAQGVLPEPNPVGDFLFDH-NADG--SVTFCSDYGILFGQKAIDNMNQTQLRRYM 57
V S +L+ EP+P+ +F+F DG S+ SD +LF Q+ +D + ++QL Y
Sbjct 20 VNSAVLSGSEFVEPSPLHEFMFQEIECDGKKSIRITSDIYMLFNQQRLDKLTRSQLVEYF 79
Query 58 NSLV---PRSSNYTRNYNDDFLLDYCKDRNIQSATEMASWLDHLLS 100
++L P+ S+ + D+ L + K R IQ+ +E+ +W +L+S
Sbjct 80 DNLSVSEPKMSDLRKKMTDEQLCSFVKSRFIQTPSELMAWSQYLMS 125
>gi|496050830|ref|WP_008775337.1| hypothetical protein [Bacteroides sp. 2_2_4]
gi|229448894|gb|EEO54685.1| hypothetical protein BSCG_01610 [Bacteroides sp. 2_2_4]
Length=154
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 51/93 (55%), Gaps = 6/93 (6%)
Query 13 EPNPVGDFLFDH---NADGSVTFCSDYGILFGQKAIDNMNQTQLRRYMNSLV---PRSSN 66
E +PV FLF + D S+ SD +LF Q+ +D ++QT L Y N++ PR +
Sbjct 31 EESPVDQFLFQEVSVDGDTSIRLSSDIYMLFNQQRLDKLSQTSLLEYFNNISVTEPRFNE 90
Query 67 YTRNYNDDFLLDYCKDRNIQSATEMASWLDHLL 99
D+ L+ + K R IQS +E+ +W ++L+
Sbjct 91 LRSKLGDEQLISFVKSRFIQSKSELMAWSNYLM 123
>gi|547226429|ref|WP_021963492.1| putative uncharacterized protein [Prevotella sp. CAG:1185]
gi|524103381|emb|CCY83992.1| putative uncharacterized protein [Prevotella sp. CAG:1185]
Length=152
Score = 57.0 bits (136), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 64/112 (57%), Gaps = 10/112 (9%)
Query 13 EPNPVGDFLFDH-------NADGSVTFCSDYGILFGQKAIDNMNQTQLRRYMNSLVPRSS 65
+P+P+ +F+ + + ++ + D +LF Q +D++ + ++++++ L PRS
Sbjct 26 QPSPIREFMTEKVTYFNGSDKKTAIAYVDDIYMLFNQNRLDSVGRDTIQKWLDGLTPRSD 85
Query 66 NYTR---NYNDDFLLDYCKDRNIQSATEMASWLDHLLSEGQSLESDLQAYAA 114
+ + N D+ L++ CK R IQS++E+ +W ++L + S+ S ++A A
Sbjct 86 SLAKLRENVTDEQLMEICKSRYIQSSSELLAWSEYLNANYASILSSIEASKA 137
>gi|515877281|ref|WP_017307864.1| hypothetical protein [Fischerella sp. PCC 9339]
Length=269
Score = 41.2 bits (95), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 0/72 (0%)
Query 40 FGQKAIDNMNQTQLRRYMNSLVPRSSNYTRNYNDDFLLDYCKDRNIQSATEMASWLDHLL 99
FG A+DN+ ++ + +NY R++ + L YC ++ +M SW D L
Sbjct 152 FGFTALDNIWTIVTKKLGQEPIVVEANYFRHHPEIILCRYCNRIKVEFVPQMLSWKDGKL 211
Query 100 SEGQSLESDLQA 111
+ QS E++ QA
Sbjct 212 KQWQSYEAESQA 223
>gi|494822883|ref|WP_007558291.1| hypothetical protein [Bacteroides plebeius]
gi|198272098|gb|EDY96367.1| hypothetical protein BACPLE_00803 [Bacteroides plebeius DSM 17135]
Length=140
Score = 39.7 bits (91), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/121 (26%), Positives = 55/121 (45%), Gaps = 11/121 (9%)
Query 14 PNPVGDFLFDH-----NADGSVTFCSDYGILFGQKAIDNMNQTQLRRYMNSLVPRS--SN 66
P+PV DF + + +VT+ +D ++ Q+ +D+M Q Y++ S S
Sbjct 10 PSPVEDFYREEVQTPLGSTPAVTYRNDIYMILNQRRLDSMTLAQFSDYLDHDRSASQLSQ 69
Query 67 YTRNYNDDFLLDYCKDRNIQSATEMASWLDHL----LSEGQSLESDLQAYAASLSASVVN 122
+D+ L + K R IQ +E+ +W +L E Q LE ++A S + +
Sbjct 70 MREKMSDEQLHQFVKSRYIQHPSELRAWASYLDIEYSKEIQKLEEAVEAVKKQTSNTDPS 129
Query 123 P 123
P
Sbjct 130 P 130
>gi|635365037|emb|CCI46569.1| unnamed protein product [Albugo candida]
Length=306
Score = 38.5 bits (88), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 31/92 (34%), Positives = 43/92 (47%), Gaps = 5/92 (5%)
Query 12 PE-PNPVGDFLFDHNADGSVTFCSDYGILFGQKAIDNMNQTQLRRYMNSLVP-RSSNYTR 69
PE +P GD L D +D C Y + FG + ID ++Q Y + P S+N TR
Sbjct 206 PEISDPSGDTLLDGQSDIWSLGCILYAMAFGAELIDYLSQNADGEYKSVEFPSESANGTR 265
Query 70 NYNDDFLLDYC---KDRNIQSATEMASWLDHL 98
N N F ++C +D A E + LD L
Sbjct 266 NQNAVFTQEFCEFIRDMVAYKAEERPTILDVL 297
Lambda K H a alpha
0.315 0.130 0.379 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 441460904010