bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
49,011,213 sequences; 17,563,301,199 total letters
Query= Contig-13_CDS_annotation_glimmer3.pl_2_1
Length=378
Score E
Sequences producing significant alignments: (Bits) Value
gi|547226428|ref|WP_021963491.1| putative uncharacterized protein 59.3 2e-06
gi|494822881|ref|WP_007558289.1| hypothetical protein 58.5 3e-06
gi|639237431|ref|WP_024568108.1| hypothetical protein 53.9 6e-05
gi|575094344|emb|CDL65728.1| unnamed protein product 53.9 8e-05
gi|494610273|ref|WP_007368519.1| hypothetical protein 52.4 3e-04
gi|490418711|ref|WP_004291034.1| hypothetical protein 51.6 5e-04
gi|647452992|ref|WP_025792810.1| hypothetical protein 50.1 0.002
gi|575094372|emb|CDL65753.1| unnamed protein product 46.2 0.028
gi|575094301|emb|CDL65691.1| unnamed protein product 45.4 0.050
gi|547920047|ref|WP_022322418.1| putative uncharacterized protein 42.4 0.27
>gi|547226428|ref|WP_021963491.1| putative uncharacterized protein [Prevotella sp. CAG:1185]
gi|524103380|emb|CCY83991.1| putative uncharacterized protein [Prevotella sp. CAG:1185]
Length=416
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 82/321 (26%), Positives = 128/321 (40%), Gaps = 64/321 (20%)
Query 1 MSARSQRKANEMNFKINQMNNEFNAKEAEKARAFQLDMWNKE------------------ 42
++SQ N+ N +I QMNNE+N + K + DM+N++
Sbjct 21 FGSKSQSDTNKTNLQIAQMNNEYNERMFNKQLEYNQDMFNQQVEYDQKKMEQQNNFNARM 80
Query 43 --------NAYNTPSAQRERMEQAGYNAYM-------------Npadagsasgmssttsa 81
YN+ AQR R+E AG N Y+ + + S +
Sbjct 81 QNEAIGAQQVYNSAKAQRARLEAAGLNPYLMMSGGNAGAVSAVSGSSGSGGSPSPMGVNP 140
Query 82 sasspaVMQA--TDFSSLGEV-----------GVRLAQELKLFSEKKGLDIRNFSLKDYL 128
+S AVMQA DFS + + GVR AQ L + G I N + L
Sbjct 141 PTASSAVMQAFRPDFSGVTGIIQTLLDIQAQKGVRDAQAFSLGEQASGFKIENKYKAEKL 200
Query 129 KAQIDKMRGETNWRNLSPEAI------RFNIMSGLEAAKIQMEGLKEQWINQKWSNNLLR 182
I + + N +N S E++ R M + +K Q E N +++ L+R
Sbjct 201 LWDIYNSKADYNLKN-SQESLNNMSFARLQAMFSSDVSKAQREAE-----NAQFTGELIR 254
Query 183 ANVANSLLDAEGKTVINKYLDQQQQADLNVKAAHYEELLLRGQLHSREARESLSRELLNY 242
A A L KY DQ+ +L + +A L+ G+ +AR+++ L
Sbjct 255 AQTACQQLQGLLGAKELKYYDQKVLQELAIMSAQQYSLVAAGKASEAQARQAIENALNLV 314
Query 243 TRANGQKISNKVAERTANNLI 263
+ G K+ N V ++TAN LI
Sbjct 315 EQREGIKVDNYVKQKTANALI 335
>gi|494822881|ref|WP_007558289.1| hypothetical protein [Bacteroides plebeius]
gi|198272097|gb|EDY96366.1| hypothetical protein BACPLE_00802 [Bacteroides plebeius DSM 17135]
Length=344
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 40/56 (71%), Gaps = 0/56 (0%)
Query 9 ANEMNFKINQMNNEFNAKEAEKARAFQLDMWNKENAYNTPSAQRERMEQAGYNAYM 64
N+ N +I QM+NE+N ++ E+ + DMWN EN YN+ S+QR+R+E+AG N YM
Sbjct 43 TNQANIQIAQMSNEYNREQLERQIEQEWDMWNAENEYNSASSQRKRLEEAGLNPYM 98
>gi|639237431|ref|WP_024568108.1| hypothetical protein [Elizabethkingia anophelis]
Length=287
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 32/46 (70%), Gaps = 0/46 (0%)
Query 19 MNNEFNAKEAEKARAFQLDMWNKENAYNTPSAQRERMEQAGYNAYM 64
MNN N K A + RAF LDMWN+ N YNTP AQ +R+++AG N +
Sbjct 18 MNNSSNKKIARENRAFALDMWNRNNEYNTPLAQMQRLKEAGLNPNL 63
>gi|575094344|emb|CDL65728.1| unnamed protein product [uncultured bacterium]
Length=368
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/56 (45%), Positives = 39/56 (70%), Gaps = 2/56 (4%)
Query 8 KANEMNFKINQMNNEFNAKEAEKARAFQLDMWNKENAYNTPSAQRERMEQAGYNAY 63
++++ F + QM E+ ++EA+K R FQLDMWN+ N YN P Q +R+E+AG N +
Sbjct 39 QSSDQRFALGQM--EWQSQEAQKQRDFQLDMWNRNNEYNKPDEQMKRLEEAGINPW 92
>gi|494610273|ref|WP_007368519.1| hypothetical protein [Prevotella multiformis]
gi|324988545|gb|EGC20508.1| hypothetical protein HMPREF9141_0987 [Prevotella multiformis
DSM 16608]
Length=437
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 70/260 (27%), Positives = 121/260 (47%), Gaps = 31/260 (12%)
Query 5 SQRKANEMNFKINQMNNEFNAKEAEKARAFQLDMWNKENAYNTPSAQRERMEQAGYNAYM 64
+Q +ANE N +I + N+ + ++ AF MWN+ N YN+P+AQ +R AG N Y+
Sbjct 92 AQDRANETNLQIAREANQNQYQMFQEQNAFNERMWNQMNQYNSPAAQMQRYTDAGINPYI 151
Query 65 ---NpadagsasgmssttsasasspaVMQAT--------DFSSLGEVGVRLAQELKLFSE 113
N + S + S + VM AT F+ +G V + AQ ++
Sbjct 152 AAGNVQTGNAQSALQSAPAPQQHVAQVMPATGMGDAVQNSFAQIGNVISQFAQNQLALAQ 211
Query 114 KKGLDIRNFSLKDYLKAQIDKMRGET-NWRNLSPEAIRFNIMSGLEAAKIQMEGLKEQWI 172
K D + AQ+ K+ ET N N N + GL+ +I+ + L +
Sbjct 212 AKKTDAEASWIDRLNSAQMGKLGAETLNIHNQ-------NSLLGLD-YQIKSDTLGNYKL 263
Query 173 NQKWSNNLLRANVANSLLDAEGKTVINKYLDQQQQADLNVKAAHYEELLLRGQLHSREAR 232
S + +A + N+L+DA+ + + + + ++KA + E+ +L +E
Sbjct 264 LSDLS--VQQAALTNNLVDAQTRKAL--FESDLAMVESHIKAKYGEKQVL------QEIS 313
Query 233 ESLSRELLNYTRA-NGQKIS 251
ES+SR+ LNY A N +K++
Sbjct 314 ESVSRQYLNYVSAHNSEKLT 333
>gi|490418711|ref|WP_004291034.1| hypothetical protein [Bacteroides eggerthii]
gi|217986638|gb|EEC52972.1| hypothetical protein BACEGG_02723 [Bacteroides eggerthii DSM
20697]
Length=368
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 40/88 (45%), Gaps = 33/88 (38%)
Query 10 NEMNFKINQMNNEFNAKEAEKA---------------------------------RAFQL 36
N+ N +I QMNN FN K +K +A+Q
Sbjct 31 NQANKEIAQMNNAFNEKMFDKQIAYNKEMYQTQLGDQWKFYDDQKANAWKLYEDNKAYQT 90
Query 37 DMWNKENAYNTPSAQRERMEQAGYNAYM 64
+MWNK+N YN PSAQR R+E AG N YM
Sbjct 91 EMWNKQNEYNDPSAQRARLEAAGLNPYM 118
>gi|647452992|ref|WP_025792810.1| hypothetical protein [Prevotella histicola]
Length=424
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/60 (42%), Positives = 39/60 (65%), Gaps = 0/60 (0%)
Query 5 SQRKANEMNFKINQMNNEFNAKEAEKARAFQLDMWNKENAYNTPSAQRERMEQAGYNAYM 64
S RK N+ N +I + N+ N + +++ AF M+++ NAYNTPSAQ +R +AG N Y+
Sbjct 25 SNRKTNQTNLQIARETNQMNYQLFQESNAFNEKMYHEANAYNTPSAQMQRYAEAGINPYI 84
>gi|575094372|emb|CDL65753.1| unnamed protein product [uncultured bacterium]
Length=385
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 34/54 (63%), Gaps = 0/54 (0%)
Query 8 KANEMNFKINQMNNEFNAKEAEKARAFQLDMWNKENAYNTPSAQRERMEQAGYN 61
KA + N + + NEFNA EAEK RAFQ ++ + ++N+PS Q + M AG N
Sbjct 58 KARQFNSQQTALQNEFNASEAEKNRAFQKSLYERSLSWNSPSNQLKMMADAGLN 111
>gi|575094301|emb|CDL65691.1| unnamed protein product [uncultured bacterium]
Length=437
Score = 45.4 bits (106), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 21/43 (49%), Positives = 26/43 (60%), Gaps = 0/43 (0%)
Query 23 FNAKEAEKARAFQLDMWNKENAYNTPSAQRERMEQAGYNAYMN 65
F +E R F MW N YNTP AQ++R+EQAG N Y+N
Sbjct 54 FTHQENALQRDFARQMWKDTNDYNTPIAQKQRLEQAGMNPYVN 96
>gi|547920047|ref|WP_022322418.1| putative uncharacterized protein [Parabacteroides merdae CAG:48]
gi|524592959|emb|CDD13571.1| putative uncharacterized protein [Parabacteroides merdae CAG:48]
Length=259
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/42 (48%), Positives = 27/42 (64%), Gaps = 0/42 (0%)
Query 21 NEFNAKEAEKARAFQLDMWNKENAYNTPSAQRERMEQAGYNA 62
N + E EKA A ++MWN +N YN+P+AQ R+ QAG N
Sbjct 8 NNWQTAENEKAYARSVEMWNMQNQYNSPTAQMSRLRQAGLNP 49
Lambda K H a alpha
0.312 0.126 0.355 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 2349684375798