bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           49,011,213 sequences; 17,563,301,199 total letters





Query= Contig-13_CDS_annotation_glimmer3.pl_2_3

Length=174
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|495547522|ref|WP_008272101.1|  Secreted polysaccharide polymerase  38.1    2.4
gi|504642753|ref|WP_014829855.1|  hypothetical protein                36.6    9.5
gi|503720428|ref|WP_013954504.1|  hypothetical protein                36.6    9.5
gi|503221868|ref|WP_013456529.1|  hypothetical protein                36.6    9.5
gi|500501496|ref|WP_011949222.1|  hypothetical protein                36.6    9.6


>gi|495547522|ref|WP_008272101.1| Secreted polysaccharide polymerase [Flavobacteriales bacterium 
ALC-1]
 gi|159875656|gb|EDP69716.1| Secreted polysaccharide polymerase [Flavobacteriales bacterium 
ALC-1]
Length=405

 Score = 38.1 bits (87),  Expect = 2.4, Method: Compositional matrix adjust.
 Identities = 29/122 (24%), Positives = 52/122 (43%), Gaps = 18/122 (15%)

Query  20   IYARIHKHARGELRDNRLRRPCRQPFGHVVINLRQRHFRHVLSVICQSHKITILMIIFYK  79
            +YAR    A G   D             ++  L    F    + I ++ KI IL+I+FY 
Sbjct  146  VYARELDRAEGLYGDAN-----NAALASIIAYLLFDKFFKPWNFITKASKILILLILFYS  200

Query  80   VTLLCGSVSFFYQTIGALSTVDLYKFSCIFILNHSWMLTFVKILKYSIIHKIFYLGVTAT  139
            V L               ST  L+ F+ +F + +    T ++++ + ++  +FY G+ A 
Sbjct  201  VFL-------------TFSTTGLFVFTIVFFITNYKFFTGIRLILFGVLIALFYAGIFAL  247

Query  140  RS  141
            +S
Sbjct  248  KS  249


>gi|504642753|ref|WP_014829855.1| hypothetical protein [Mycoplasma bovis]
 gi|392429632|ref|YP_006470677.1| hypothetical protein Mbov_0038 [Mycoplasma bovis HB0801]
 gi|392051041|gb|AFM51416.1| putative transmembrane protein [Mycoplasma bovis HB0801]
Length=3326

 Score = 36.6 bits (83),  Expect = 9.5, Method: Composition-based stats.
 Identities = 18/55 (33%), Positives = 30/55 (55%), Gaps = 0/55 (0%)

Query  85   GSVSFFYQTIGALSTVDLYKFSCIFILNHSWMLTFVKILKYSIIHKIFYLGVTAT  139
            GS +F+ Q I A+S ++ YKF+  F+ N SW    + +  +SI+  +   G   T
Sbjct  119  GSFNFYNQYIEAVSPIEFYKFTEWFMKNVSWGPEIITLKSFSIVKGVEMAGNNIT  173


>gi|503720428|ref|WP_013954504.1| hypothetical protein [Mycoplasma bovis]
 gi|339320565|ref|YP_004683087.1| hypothetical protein MMB_0038 [Mycoplasma bovis Hubei-1]
 gi|338226690|gb|AEI89752.1| conserved hypothetical protein [Mycoplasma bovis Hubei-1]
 gi|640844520|gb|AIA33629.1| hypothetical protein K668_00185 [Mycoplasma bovis CQ-W70]
Length=3326

 Score = 36.6 bits (83),  Expect = 9.5, Method: Composition-based stats.
 Identities = 18/55 (33%), Positives = 30/55 (55%), Gaps = 0/55 (0%)

Query  85   GSVSFFYQTIGALSTVDLYKFSCIFILNHSWMLTFVKILKYSIIHKIFYLGVTAT  139
            GS +F+ Q I A+S ++ YKF+  F+ N SW    + +  +SI+  +   G   T
Sbjct  119  GSFNFYNQYIEAVSPIEFYKFTEWFMKNVSWGPEIITLKSFSIVKGVEMAGNNIT  173


>gi|503221868|ref|WP_013456529.1| hypothetical protein [Mycoplasma bovis]
 gi|313678170|ref|YP_004055910.1| hypothetical protein MBOVPG45_0038 [Mycoplasma bovis PG45]
 gi|312950720|gb|ADR25315.1| conserved domain protein [Mycoplasma bovis PG45]
Length=3326

 Score = 36.6 bits (83),  Expect = 9.5, Method: Composition-based stats.
 Identities = 18/55 (33%), Positives = 30/55 (55%), Gaps = 0/55 (0%)

Query  85   GSVSFFYQTIGALSTVDLYKFSCIFILNHSWMLTFVKILKYSIIHKIFYLGVTAT  139
            GS +F+ Q I A+S ++ YKF+  F+ N SW    + +  +SI+  +   G   T
Sbjct  119  GSFNFYNQYIEAVSPIEFYKFTEWFMKNVSWGPEIITLKSFSIVKGVEMAGNNIT  173


>gi|500501496|ref|WP_011949222.1| hypothetical protein [Mycoplasma agalactiae]
 gi|148377307|ref|YP_001256183.1| hypothetical protein MAG_0390 [Mycoplasma agalactiae PG2]
 gi|148291353|emb|CAL58736.1| Conserved hypothetical protein [Mycoplasma agalactiae PG2]
Length=3329

 Score = 36.6 bits (83),  Expect = 9.6, Method: Composition-based stats.
 Identities = 18/55 (33%), Positives = 31/55 (56%), Gaps = 0/55 (0%)

Query  85   GSVSFFYQTIGALSTVDLYKFSCIFILNHSWMLTFVKILKYSIIHKIFYLGVTAT  139
            GS +F+ Q I A+S ++ YKF+  F+ N SW    + +  +SI+  +   G + T
Sbjct  119  GSFNFYNQYIEAVSPLEFYKFTEWFMKNVSWGPEIITLKSFSIVKGVEMTGNSIT  173



Lambda      K        H        a         alpha
   0.337    0.146    0.461    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 439831946280