bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
49,011,213 sequences; 17,563,301,199 total letters
Query= Contig-16_CDS_annotation_glimmer3.pl_2_4
Length=91
Score E
Sequences producing significant alignments: (Bits) Value
gi|296822588|ref|XP_002850310.1| ankyrin-1 37.0 1.3
gi|656341580|gb|KEF34550.1| hypothetical protein RDMS_06490 34.3 4.2
gi|515336866|ref|WP_016857963.1| hypothetical protein 35.0 4.5
gi|630030113|ref|XP_007837071.1| hypothetical protein PFICI_10299 34.7 6.5
gi|492676287|ref|WP_005919063.1| hypothetical protein 33.9 9.5
>gi|296822588|ref|XP_002850310.1| ankyrin-1 [Arthroderma otae CBS 113480]
gi|238837864|gb|EEQ27526.1| ankyrin-1 [Arthroderma otae CBS 113480]
Length=1443
Score = 37.0 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 23/80 (29%), Positives = 42/80 (53%), Gaps = 4/80 (5%)
Query 2 EIQENLIPLRRIEVTAIINALKIIKIMQKFIISV---KEKQTGRDVIPPYIVNSLEGLGH 58
+ +EN +PLR++ + ++ LK I I+++ E G D++PPY N L+
Sbjct 392 QAKENELPLRKLTIGECVDYLKSISKNDPVILAIDALDELYAGNDLVPPYWTN-LQRFLE 450
Query 59 YSERVSQLGLIVIVDSIREE 78
+ + Q G + IV S R++
Sbjct 451 ALDTLEQTGNVKIVVSSRDD 470
>gi|656341580|gb|KEF34550.1| hypothetical protein RDMS_06490 [Deinococcus sp. RL]
Length=145
Score = 34.3 bits (77), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 0/67 (0%)
Query 10 LRRIEVTAIINALKIIKIMQKFIISVKEKQTGRDVIPPYIVNSLEGLGHYSERVSQLGLI 69
L R E T + +++ +M++ +I+ RDV + + GL SER +G++
Sbjct 63 LSRWEATTQLAGIRVADVMRRSVITTTPDADARDVARTLLSRRIGGLPVVSERGEVMGMV 122
Query 70 VIVDSIR 76
+ D +R
Sbjct 123 TVTDLLR 129
>gi|515336866|ref|WP_016857963.1| hypothetical protein, partial [Candidatus Hamiltonella defensa]
Length=1366
Score = 35.0 bits (79), Expect = 4.5, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 38/67 (57%), Gaps = 2/67 (3%)
Query 19 INALKIIKIMQKFIISVKEKQTGRDVIPPYIVNSL--EGLGHYSERVSQLGLIVIVDSIR 76
++ LK IK QK I + E+Q V+PP +N L + L HY+ +S+ IV +R
Sbjct 797 MSGLKTIKEAQKTINTGAEEQHQGQVVPPTELNYLPTQALQHYTMTLSEETKTEIVTKLR 856
Query 77 EENDFVE 83
E+ +F++
Sbjct 857 EKINFLD 863
>gi|630030113|ref|XP_007837071.1| hypothetical protein PFICI_10299 [Pestalotiopsis fici W106-1]
gi|573058400|gb|ETS78237.1| hypothetical protein PFICI_10299 [Pestalotiopsis fici W106-1]
Length=506
Score = 34.7 bits (78), Expect = 6.5, Method: Composition-based stats.
Identities = 19/66 (29%), Positives = 36/66 (55%), Gaps = 3/66 (5%)
Query 11 RRIEVTAIINALKIIKIMQKFIISVKEKQTGRDVIPPYIVNSLEGLGHYSERVSQLGLIV 70
R + ++ AL+ + I +I QT + +IPP ++N ++ LGH+ V+ GLI+
Sbjct 312 RTYDQPTLLAALQSVVIYLLLLIFPTPSQTSQSLIPPSLLNQIQALGHH---VAATGLIL 368
Query 71 IVDSIR 76
++ R
Sbjct 369 HEETAR 374
>gi|492676287|ref|WP_005919063.1| hypothetical protein [Fusobacterium nucleatum]
gi|402256527|gb|EJU07006.1| hypothetical protein B437_09545 [Fusobacterium nucleatum ChDC
F128]
Length=265
Score = 33.9 bits (76), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 14/37 (38%), Positives = 23/37 (62%), Gaps = 0/37 (0%)
Query 24 IIKIMQKFIISVKEKQTGRDVIPPYIVNSLEGLGHYS 60
I+KI F+I +KE + D++ YIVN+ + L Y+
Sbjct 203 IVKIYANFLIEIKEYRKAEDILMKYIVNNEDNLDEYA 239
Lambda K H a alpha
0.319 0.140 0.368 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 437208516180