bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           49,011,213 sequences; 17,563,301,199 total letters





Query= Contig-16_CDS_annotation_glimmer3.pl_2_5

Length=168
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|547226428|ref|WP_021963491.1|  putative uncharacterized protein    37.7    2.6
gi|674060863|ref|XP_008837121.1|  PREDICTED: serine/threonine-pro...  37.4    4.5
gi|586741368|gb|EAR90167.2|  transmembrane protein, putative          37.0    5.5


>gi|547226428|ref|WP_021963491.1| putative uncharacterized protein [Prevotella sp. CAG:1185]
 gi|524103380|emb|CCY83991.1| putative uncharacterized protein [Prevotella sp. CAG:1185]
Length=416

 Score = 37.7 bits (86),  Expect = 2.6, Method: Compositional matrix adjust.
 Identities = 32/112 (29%), Positives = 57/112 (51%), Gaps = 12/112 (11%)

Query  2    EFAGRL----TSAQEAQILLDSEAQQVLNKYLDEQQQADLFIKGQTLSNLYAQGSLTEAQ  57
            +F G L    T+ Q+ Q LL ++      KY D++   +L I      +L A G  +EAQ
Sbjct  247  QFTGELIRAQTACQQLQGLLGAKEL----KYYDQKVLQELAIMSAQQYSLVAAGKASEAQ  302

Query  58   YKTEMAKAVKTAAETNGIRINNKIASQTADSLIYANIQSNRARGLSSLWDSK  109
             +  +  A+    +  GI+++N +  +TA++L    I++ R    +S W+SK
Sbjct  303  ARQAIENALNLVEQREGIKVDNYVKQKTANAL----IKTARNNCNTSYWNSK  350


>gi|674060863|ref|XP_008837121.1| PREDICTED: serine/threonine-protein kinase MRCK gamma [Nannospalax 
galili]
Length=1543

 Score = 37.4 bits (85),  Expect = 4.5, Method: Composition-based stats.
 Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 5/79 (6%)

Query  2    EFAGRLTSAQEAQILLDSEAQQVLNKYLDEQQQADLFIKGQ--TLSNLYAQ--GSLTEAQ  57
            E   +L  AQE +    S+ Q  L+  L+E Q A   ++GQ  TL+    Q  G   +++
Sbjct  513  ELLQKLWEAQEREAATASQIQ-ALSSQLEEAQVARRELEGQVATLNQEVTQLQGQCKQSR  571

Query  58   YKTEMAKAVKTAAETNGIR  76
             ++  AK V TA+ETNG+R
Sbjct  572  EESSQAKTVHTASETNGMR  590


>gi|586741368|gb|EAR90167.2| transmembrane protein, putative [Tetrahymena thermophila SB210]
Length=1711

 Score = 37.0 bits (84),  Expect = 5.5, Method: Compositional matrix adjust.
 Identities = 27/106 (25%), Positives = 49/106 (46%), Gaps = 19/106 (18%)

Query  60    TEMAKAVKTAAETNGIRINNKIASQTADSLIYANIQSNRARGLSSLW---------DSKN  110
             T+  + +K+    +G  +N K+ +   DS++Y+   SN    L  LW         +  +
Sbjct  959   TKELQKLKSEFVISGFLVNFKMINILFDSIVYSQYSSNFVNLLYELWQYMSIINISNQYD  1018

Query  111   TNVLKNIEYSKDKALRDYYKWSSKHKQKDVDSYELRNAVDYGTRIF  156
             T +++NI Y K          SSK++Q+   ++ LR    YG+  F
Sbjct  1019  TTLIQNIVYLK----------SSKYQQQQAKAFSLRQTQKYGSNQF  1054



Lambda      K        H        a         alpha
   0.310    0.125    0.337    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 438393334158