bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           49,011,213 sequences; 17,563,301,199 total letters





Query= Contig-1_CDS_annotation_glimmer3.pl_2_3

Length=87
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|407004583|gb|EKE20932.1|  hypothetical protein ACD_7C00426G0001    35.0    4.0


>gi|407004583|gb|EKE20932.1| hypothetical protein ACD_7C00426G0001, partial [uncultured bacterium]
Length=792

 Score = 35.0 bits (79),  Expect = 4.0, Method: Compositional matrix adjust.
 Identities = 23/68 (34%), Positives = 40/68 (59%), Gaps = 3/68 (4%)

Query  1    MITSTKMKRSKAMMNKTWNVRDQPRESLERQLEKKYKEIDGNYRMLRKVSNIEDAKMLVD  60
            ++  T    SK  +NK   V     E L    EKKYK+I  +Y +++K+S  +++K+L+D
Sbjct  613  ILKKTFFSISKPEINKACKVFIFLLEKLFE--EKKYKQITDSYNLIKKISFDQESKILID  670

Query  61   EIWQMKSF  68
             I+ +K+F
Sbjct  671  SIF-IKAF  677



Lambda      K        H        a         alpha
   0.313    0.125    0.345    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 443089861740