bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
49,011,213 sequences; 17,563,301,199 total letters
Query= Contig-27_CDS_annotation_glimmer3.pl_2_2
Length=388
Score E
Sequences producing significant alignments: (Bits) Value
gi|585369477|ref|WP_024251053.1| hypothetical protein 493 2e-172
gi|575096060|emb|CDL66943.1| unnamed protein product 346 3e-113
gi|575094494|emb|CDL65868.1| unnamed protein product 276 5e-86
gi|575094546|emb|CDL65906.1| unnamed protein product 275 3e-85
gi|575094569|emb|CDL65925.1| unnamed protein product 246 2e-74
gi|575094487|emb|CDL65854.1| unnamed protein product 238 3e-71
gi|575094418|emb|CDL65793.1| unnamed protein product 194 4e-54
gi|530695361|gb|AGT39916.1| replication initiator 169 1e-45
gi|530695371|gb|AGT39925.1| replication initiator 167 9e-45
gi|313766924|gb|ADR80651.1| putative replication initiation protein 163 2e-43
>gi|585369477|ref|WP_024251053.1| hypothetical protein [Escherichia coli]
Length=243
Score = 493 bits (1269), Expect = 2e-172, Method: Compositional matrix adjust.
Identities = 235/243 (97%), Positives = 238/243 (98%), Gaps = 0/243 (0%)
Query 146 MQSLSLCKRDLQLFWKRLRKAFPDDHIRYFACGEYGSTTFRPHYHAIVFGLHLHDLMPVQ 205
MQSLSLCKRDLQLFWKRLRKAFPDDHIRYFACGEYGSTTFRPHYHAIVFGLHLHDL+PVQ
Sbjct 1 MQSLSLCKRDLQLFWKRLRKAFPDDHIRYFACGEYGSTTFRPHYHAIVFGLHLHDLIPVQ 60
Query 206 DIRRGDVGYQYFYSEALQKAWSVVEQKGEYDTPCTRKPIGYVLVGQVNWETCAYVARYVL 265
DIRRGDVGYQYFYSE+LQ+AWSVVEQKGEYDTPC RKPIGYVLVGQVNWETCAYVARYVL
Sbjct 61 DIRRGDVGYQYFYSESLQRAWSVVEQKGEYDTPCIRKPIGYVLVGQVNWETCAYVARYVL 120
Query 266 KKASGPEADVYQTFNIDPEYVDMSRRPGIGRQWYDDHPECMEYDTISISTPDGGRKIRPP 325
KKA GPEADVYQTFNI PEYVDMSRRPGIGRQWYDDHPECMEYDTISISTPDGGRKIRPP
Sbjct 121 KKACGPEADVYQTFNIQPEYVDMSRRPGIGRQWYDDHPECMEYDTISISTPDGGRKIRPP 180
Query 326 KYFDKLFDLEQPELMAAIKEKRKHFAEEGKKAKLAQSTMTYEEILETQERVLHNRIKNLR 385
KYFDKLFDLEQPELMA IK KRKHFAEEGKKAKLAQSTMTYEEILETQERVLHNRIKNLR
Sbjct 181 KYFDKLFDLEQPELMAEIKAKRKHFAEEGKKAKLAQSTMTYEEILETQERVLHNRIKNLR 240
Query 386 REL 388
REL
Sbjct 241 REL 243
>gi|575096060|emb|CDL66943.1| unnamed protein product [uncultured bacterium]
Length=339
Score = 346 bits (887), Expect = 3e-113, Method: Compositional matrix adjust.
Identities = 175/359 (49%), Positives = 227/359 (63%), Gaps = 31/359 (9%)
Query 30 IACFHPLKGFRIGTTKNGKADMKIVPYGVHHLELRKGRICTSDVPEISAYSEKAWLDWVE 89
++C+HP+ ++ T KI+ P AY E V+
Sbjct 11 LSCYHPILAYKSKTVNPENGKCKII----------------FQTPTSMAYWEP-----VQ 49
Query 90 IPCGKCEGCRIARSREWANRCMMELEYHDSAYFLTLTYDEEHVPRHWYADPETGEAMQSL 149
+PCG+C GCRI SR+WANRCM+EL+ HDSA+F T TYD +HVP +YAD ETGEA SL
Sbjct 50 LPCGQCIGCRIDYSRQWANRCMLELQDHDSAFFCTFTYDNDHVPISYYADKETGEAKPSL 109
Query 150 SLCKRDLQLFWKRLRKAFPDDHIRYFACGEYGSTTFRPHYHAIVFGLHLHDLMPVQDIRR 209
+L KRD QL KR+RK F DDHIR+FA GEYG T RPHYHAI++GLHL+DL+P + ++
Sbjct 110 TLRKRDFQLLMKRIRKHFSDDHIRFFAAGEYGGQTLRPHYHAIIYGLHLNDLVPYKTVKE 169
Query 210 GDVGYQYFYSEALQKAWSVVEQKGEYDTPCTRKPIGYVLVGQVNWETCAYVARYVLKKAS 269
G V Y Y+ S +LQK W ++ G KPIG+V+VG V WE+CAY ARYVLKK
Sbjct 170 GGVLYTYYNSPSLQKCW--LDSDG--------KPIGFVVVGAVTWESCAYTARYVLKKQK 219
Query 270 GPEADVYQTFNIDPEYVDMSRRPGIGRQWYDDHPECMEYDTISISTPDGGRKIRPPKYFD 329
G + VYQ FN++PE+ MSR+PGI R +YD HP+ + D I+IST GGRK RPP+YF+
Sbjct 220 GEASTVYQEFNLEPEFTLMSRKPGIARNYYDTHPDLFQSDFINISTLKGGRKFRPPRYFE 279
Query 330 KLFDLEQPELMAAIKEKRKHFAEEGKKAKLAQSTMTYEEILETQERVLHNRIKNLRREL 388
KLF+L+ PE A E RK AKLA++ + +L +ER +RIK LRR L
Sbjct 280 KLFELDFPEEAAKRSEVRKAAGSNAMAAKLAKTNLDPLSMLAVEERNFTDRIKPLRRNL 338
>gi|575094494|emb|CDL65868.1| unnamed protein product [uncultured bacterium]
Length=348
Score = 276 bits (706), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 145/365 (40%), Positives = 220/365 (60%), Gaps = 26/365 (7%)
Query 30 IACFHPLKGFRIGTTKNGKADMKIVPYGVHHLELRK-GRICTSDVPEISAYSEKAWLDWV 88
+ACFHPLKG+ +GT +GK D+KI Y H+EL GR ++ + S Y+ K D++
Sbjct 1 MACFHPLKGYVVGTLPSGKRDIKICSYESDHVELHTDGRWYVANTKDKSKYTVKVVRDYI 60
Query 89 EIPCGKCEGCRIARSREWANRCMMELEYHDSAYFLTLTYDEEHVPRHWYADPETGEAMQS 148
IPCGKC GCR+A SR+WA+RCM+E YH +YFLTLTYD++++P + +TGE +
Sbjct 61 IIPCGKCVGCRLAYSRQWADRCMLESSYHTHSYFLTLTYDDDNLPLSESINQDTGEINYN 120
Query 149 LSLCKRDLQLFWKRLRKAFP---DD--HIRYFACGEYGSTTFRPHYHAIVFGLHLHDLMP 203
+L K+D+Q F KRLR+ DD HI+YF GEYGS TFRPHYH I++G ++DL
Sbjct 121 ATLVKKDIQDFIKRLRRFCEYNIDDNLHIKYFCAGEYGSQTFRPHYHMILYGFPINDL-- 178
Query 204 VQDIRRGDVGYQYFYSEALQKAWSVVEQKGEYDTPCTRKPIGYVLVGQVNWETCAYVARY 263
+ + GY Y+ S + K W G+V++G+V W+TCAY ARY
Sbjct 179 -KLYKMSLDGYNYYNSATIDKLWKK----------------GFVVIGEVTWDTCAYTARY 221
Query 264 VLKKASGPEADVYQTFNIDPEYVDMSRRPGIGRQWYDDHPE-CMEYDTISISTPDGGRKI 322
+LKK G A +Y+ +NI PE+ MS +P I R++Y+D+ + + D I + T + ++
Sbjct 222 ILKKQYGSGAQIYKDYNILPEFTCMSTKPAIAREYYEDNKDKIFDSDYIFLGTKEKSIQM 281
Query 323 RPPKYFDKLFDLEQPELMAAIKEKRKHFAEEGKKAKLAQSTMTYEEILETQERVLHNRIK 382
+PPKYF+KL + E ++ ++ AE+ + ++ Y +L+ +E L+ RIK
Sbjct 282 KPPKYFEKLLEKENEDVFKERRDLHASLAEDFSCLRNLSTSHDYLGMLQMEEDNLNARIK 341
Query 383 NLRRE 387
L+R+
Sbjct 342 TLKRK 346
>gi|575094546|emb|CDL65906.1| unnamed protein product [uncultured bacterium]
Length=351
Score = 275 bits (702), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 143/301 (48%), Positives = 190/301 (63%), Gaps = 10/301 (3%)
Query 90 IPCGKCEGCRIARSREWANRCMMELEYHDSAYFLTLTYDEEHVPRHWYADPETGEAMQSL 149
+PCG+C GCR+ SR WA+R M+EL+YH +A F+TLTY E +VP+H Y P+ G+ S
Sbjct 56 LPCGQCIGCRLDYSRRWADRLMLELQYHTAAIFVTLTYSELNVPKHHYQTPD-GDVNTSY 114
Query 150 SLCKRDLQLFWKRLRKAFPDDHIRYFACGEYGSTTFRPHYHAIVFGLHLHDLMPVQDIRR 209
SL KRD+QLF+KRLRK +PD IR+F GEYG TFRPHYHAI+FG+ V +RR
Sbjct 115 SLDKRDVQLFFKRLRKMYPDTKIRFFLSGEYGPKTFRPHYHAIIFGVDFAHDRYVWRVRR 174
Query 210 GDVGY-QYFYSEALQKAWSVVEQK-GEYDTPCTRKPIGYVLVGQVNWETCAYVARYVLKK 267
D + Y+ S +L++AWSV G+Y PIG V V+W TCAYVARYV KK
Sbjct 175 ADNMFVNYYRSPSLERAWSVYNNDVGDY------VPIGNVEFSDVSWHTCAYVARYVTKK 228
Query 268 ASGPEADVYQTFNIDPEYVDMSRRPGIGRQWYDDHP-ECMEYDTISISTPDGGRKIRPPK 326
+G A Y TFN+ P + MSR+PGI Q+Y DH + + D I+IST GG + PPK
Sbjct 229 LTGNLAQFYTTFNLTPPFSLMSRKPGIAYQYYADHGLDIYDNDKINISTERGGLSMLPPK 288
Query 327 YFDKLFDLEQPELMAAIKEKRKHFAEEGKKAKLAQSTMTYEEILETQERVLHNRIKNLRR 386
YFD ++L+ P+ K R A E KL QST++Y ++L E + +N+IK+L R
Sbjct 289 YFDHFYELDAPDDYVNYKSVRAALARESLLLKLDQSTLSYGQMLAVAESIKNNKIKSLDR 348
Query 387 E 387
Sbjct 349 S 349
>gi|575094569|emb|CDL65925.1| unnamed protein product [uncultured bacterium]
Length=354
Score = 246 bits (629), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 147/373 (39%), Positives = 209/373 (56%), Gaps = 37/373 (10%)
Query 30 IACFHPLKGFRIGTTKNGKADMKIVPYGVHHLELRKGR------IC--TSDVPEISAYSE 81
++C HPLKGFRIGT K+GK D IV Y V ++ ++K R +C TS I ++
Sbjct 1 MSCLHPLKGFRIGTKKSGKPDYLIVSYDVEYIVVKKYRNNKKNYVCVNTSLNEYIPVDTD 60
Query 82 KAWL-DWVEIPCGKCEGCRIARSREWANRCMMELEYHDSAYFLTLTYDEEHVPRHWYADP 140
+ D++EIPCGKC CR + W +R M+EL+ H + F+TLTYD++H+ D
Sbjct 61 VGIITDFIEIPCGKCISCRRRYAALWTDRLMLELQDHKESCFITLTYDDDHI---CCVDS 117
Query 141 ETGEAMQSLSLCKRDLQLFWKRLRKAF-----PDDHIRYFACGEYGSTTFRPHYHAIVFG 195
E + +L K LQ FWKRLR+ P+ IRYFACGEYG TTFRPHYHAI+FG
Sbjct 118 PIEENVSMYTLNKVHLQCFWKRLRQYLVRHVEPEKRIRYFACGEYGDTTFRPHYHAILFG 177
Query 196 LHLHDLMPVQDIRRGDVGYQYFYSEALQKAWSVVEQKGEYDTPCTRKPIGYVLVGQVNWE 255
DL+ + + D Y L K+ + + Q G V+VG V E
Sbjct 178 WRPTDLIQFKKNFQNDTLY-------LSKSLASIWQNGN------------VMVGDVTPE 218
Query 256 TCAYVARYVLKKASGPEADVYQTFNIDPEYVDMSRRPGIGRQWYDDH-PECMEYDTISIS 314
+C YVARY LKKA+G ++++Y+ + PE+V MSR+PGI R+++DDH E ++Y TI++S
Sbjct 219 SCRYVARYCLKKATGFDSEIYERLGVLPEFVTMSRKPGIARKYFDDHYDEIIKYKTINLS 278
Query 315 TPDGGRKIRPPKYFDKLFDLEQPELMAAIKEKRKHFAEEGKKAKLAQSTMTYEEILETQE 374
T GG ++ P YF +L + EL IK K A ++A + + + Y L E
Sbjct 279 TLKGGMSMQIPPYFIRLIEDIDSELFKEIKRSNKQAALNHQEALMKNTDVDYITYLSFLE 338
Query 375 RVLHNRIKNLRRE 387
+L K RR+
Sbjct 339 GILVREEKFYRRD 351
>gi|575094487|emb|CDL65854.1| unnamed protein product [uncultured bacterium]
Length=332
Score = 238 bits (606), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 127/302 (42%), Positives = 185/302 (61%), Gaps = 24/302 (8%)
Query 90 IPCGKCEGCRIARSREWANRCMMELEYHDSAYFLTLTYDEEHVPRHWYADPETGEAMQSL 149
+PC +C GCR+++SREWANR +ME YH ++FLTLTY++EH+PR + D TGE +
Sbjct 51 LPCRQCVGCRLSKSREWANRVVMEQLYHVESWFLTLTYNDEHLPRSFPVDEATGEILSVH 110
Query 150 -SLCKRDLQLFWKRLRKAFPDDHIRYFACGEYGSTTFRPHYHAIVFGLHLHDLMPVQDIR 208
+L K DLQ F KRLRK +R+FA GEYGS RPHYH ++FGLHL DL Q +R
Sbjct 111 GTLVKEDLQKFLKRLRKN-SGQKLRFFAAGEYGSLNMRPHYHLLIFGLHLEDL---QLLR 166
Query 209 RGDVGYQYFYSEALQKAWSVVEQKGEYDTPCTRKPIGYVLVGQVNWETCAYVARYVLKKA 268
+ +G +Y+ S L+K W P G+ ++G+V W++ AYVARY +KKA
Sbjct 167 KSPLGDEYYTSSLLEKCW----------------PFGFHILGRVTWQSAAYVARYTMKKA 210
Query 269 S-GPEADVYQTFNIDPEYVDMSRRPGIGRQWYDDHPECMEYDTISISTPDGGRKIRPPKY 327
S G + D+Y+ + PE+ MS RPG+ RQ+Y+DHP+ Y + ++STP GGRK+ P +Y
Sbjct 211 SKGYDKDLYKKAALQPEFQVMSNRPGLARQYYEDHPDIFRYLSFNVSTPQGGRKMYPSEY 270
Query 328 FDKLF-DLEQPELMAAIKEKRKHFAEEGKKAKLAQSTMTYEEILETQERVLHNRIKNLRR 386
F KL+ D + EL R+ E + + ++Y++IL+ E R+ +L R
Sbjct 271 FRKLYRDGHERELFERSLRTREELEVENHLKNML-TDLSYDDILKEDEEREFRRLSHLHR 329
Query 387 EL 388
+L
Sbjct 330 DL 331
>gi|575094418|emb|CDL65793.1| unnamed protein product [uncultured bacterium]
Length=367
Score = 194 bits (493), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 123/343 (36%), Positives = 170/343 (50%), Gaps = 73/343 (21%)
Query 87 WVEIPCGKCEGCRIARSREWANRCMMELEYHDSAYFLTLTYDEEHVPRHWYADPETGE-- 144
WV PCG+C CRI + WA RC +E YH + FLTLTYDEEHVP + ETGE
Sbjct 41 WVLTPCGQCLACRIQYAANWAARCELETNYHKQSIFLTLTYDEEHVP---VLNKETGEIY 97
Query 145 -------------AMQSLSLCKRDLQLFWKRLRKAFPD----DHIRYFACGEYGSTTFRP 187
++ +++ K D+Q F KRLRKA DHI Y+ GEYG T RP
Sbjct 98 RGVRNPAEYVAGVTLERMTVYKPDVQKFIKRLRKAAEKEGLTDHIMYYLSGEYGDKTGRP 157
Query 188 HYHAIVFGLHLHDLMPVQDIRRGDVGYQYFYSEALQKAWSVVEQKGEYDTPCTRKPIGYV 247
HYH IV+GL + D + R GY F SE L+ W +G +
Sbjct 158 HYHLIVYGLEVPDAEHIGSRR----GYDRFTSEWLKGIWG----------------MGLI 197
Query 248 LVGQVNWETCAYVARYVLKKASGPEADVYQTFNIDPEYVDMSRRPGIGRQWYDDHP-ECM 306
+G V +E+C YVARYV+KK G EA Y+ I PE+V MS +P IG++++++H E
Sbjct 198 EIGSVTYESCQYVARYVIKKRKGKEAKEYKDAGIMPEFVQMSLKPAIGQRYWEEHKDEIY 257
Query 307 EYDTISISTPDGGRKIRPPKYFDKLFDLE---------------------------QPEL 339
D I++++ GR ++PP+YFDKL D E + +
Sbjct 258 SLDQINLAS---GRTVKPPRYFDKLEDQEMLMDEIGQIESLKQKFEPDCEMMPEEAESDF 314
Query 340 MAAIKEKRKHFAEEGKKAKLAQSTMTYEEILETQERVLHNRIK 382
M IK+KR+ +A+ + + E E QER N+ K
Sbjct 315 MRDIKKKRRKTVLAKTEARWRATNLDLREYYEMQERNFENKNK 357
>gi|530695361|gb|AGT39916.1| replication initiator [Marine gokushovirus]
Length=289
Score = 169 bits (428), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 109/283 (39%), Positives = 153/283 (54%), Gaps = 50/283 (18%)
Query 83 AWLDWVEIPCGKCEGCRIARSREWANRCMMELEYHDSAYFLTLTYDEEHVPRHWYADPET 142
A+ +PCG+C GCR+ SR+WA RC+ E + H+ F+TLT+D EH+ + +PE
Sbjct 23 AFARGFNLPCGQCIGCRLDYSRQWAIRCVHEAQTHEDNCFITLTFDNEHIAKR--KNPE- 79
Query 143 GEAMQSLSLCKRDLQLFWKRLRKAFPDDHIRYFACGEYGSTTFRPHYHAIVFGLHLHDLM 202
SL + Q F KRLRK +P IR+F CGEYG RPHYHA++FG D
Sbjct 80 -------SLDNTEFQRFMKRLRKKYPHK-IRFFHCGEYGDQNKRPHYHALLFGHDFKDKK 131
Query 203 PVQDIRRGDVGYQYFYSEALQKAWSVVEQKGEYDTPCTRKPIGYVLVGQVNWETCAYVAR 262
+ +GD ++ F S+ L + W P G+ +G V+++T AY AR
Sbjct 132 LWSN--KGD--FKLFVSQELAELW----------------PYGFHTIGAVSFDTAAYCAR 171
Query 263 YVLKKASGPEADVY---------QTFN-IDPEYVDMSRRPGIGRQWYDDHP--ECMEYDT 310
YV+KK +G A + + N I PEY MSR PGIG +WY + +C ++D
Sbjct 172 YVMKKVTGDAAASHYREVDLETGEVINEIKPEYCTMSRMPGIGYEWYQKYGYHDCHKHDY 231
Query 311 ISISTPDGGRKIRPPKYFDKLFDLEQPELMAAIKEKRKHFAEE 353
I I+ G K+RPP+Y+DKL D E+ A IKE R A+E
Sbjct 232 IVIN----GYKVRPPRYYDKLCD---EEMFAQIKETRVANADE 267
>gi|530695371|gb|AGT39925.1| replication initiator [Marine gokushovirus]
Length=316
Score = 167 bits (424), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 97/277 (35%), Positives = 151/277 (55%), Gaps = 32/277 (12%)
Query 83 AWLDW-VEIPCGKCEGCRIARSREWANRCMMELEYHDSAYFLTLTYDEEHVPRHWYADPE 141
A+LD ++IPC +C GCR+ +SR+WA RC E + + + F+TLTY+ +H+P
Sbjct 41 AYLDLPIQIPCNQCIGCRLEKSRQWALRCTHEAKLYKNNSFITLTYNSDHLPL------- 93
Query 142 TGEAMQSLSLCKRDLQLFWKRLRKAFPDDHIRYFACGEYGSTTFRPHYHAIVFGLHLHDL 201
T ++ +L+L R QLF KRLRK + + IR++ CGEYG RPHYHA++F D
Sbjct 94 TNNSLPTLNL--RHFQLFLKRLRKKYSNKTIRFYHCGEYGDMNHRPHYHALLFNHDFED- 150
Query 202 MPVQDIRRGDVGYQYFYSEALQKAWSVVEQKGEYDTPCTRKPIGYVLVGQVNWETCAYVA 261
+ + + Y+ SE L W+ P T+ +G+ +G + +++ AYVA
Sbjct 151 ---KKLWKIHKDQNYYTSEVLDGLWT---------DPKTKSNMGFSTIGDLTFDSAAYVA 198
Query 262 RYVLKKASGPEADVYQTFNIDPEYVDMSRRPGIGRQWYDDHPECMEYDTISISTPDGGRK 321
RY LKK +G A+ Y + PEY MSRRPGIG W D + I G+K
Sbjct 199 RYCLKKITGKNAEDYYQGRV-PEYATMSRRPGIGNGWLDKFKSDVYPSGFIIHE---GQK 254
Query 322 IRPPKYFDKLFDLEQPEL-----MAAIKEKRKHFAEE 353
++PPKY+D++ + + + ++E +KH A+
Sbjct 255 MQPPKYYDRVTNETDEKAVRRSKILRMQEAKKHAADN 291
>gi|313766924|gb|ADR80651.1| putative replication initiation protein [Uncultured Microviridae]
Length=285
Score = 163 bits (412), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 105/290 (36%), Positives = 149/290 (51%), Gaps = 61/290 (21%)
Query 88 VEIPCGKCEGCRIARSREWANRCMMELEYHDSAY---FLTLTYDEEHVPRHWYADPETGE 144
+E+ C +C GCR+ + WA+R E +D + F+TLTYDEEH+P+ W
Sbjct 1 MEVACSQCIGCRLDHAGMWASRIEHESSLYDDSNGNCFITLTYDEEHLPQDW-------- 52
Query 145 AMQSLSLCKRDLQLFWKRLRKAFPDDHIRYFACGEYGS-------TTF-------RPHYH 190
SL K Q F KRLRK +P IRY+ CGEYG TT RPHYH
Sbjct 53 -----SLDKSHFQKFMKRLRKRYPQK-IRYYHCGEYGENCRHGIHTTLCPGCNVGRPHYH 106
Query 191 AIVFGLHLHDLMPVQDIRRGDVGYQYFYSEALQKAWSVVEQKGEYDTPCTRKPIGYVLVG 250
AI+F + HD + V + G +F S+ L + W G+ VG
Sbjct 107 AILFNIDFHDRVLVGQSK----GIPHFTSDTLTEIWGH----------------GFTQVG 146
Query 251 QVNWETCAYVARYVLKKASGPEA-DVYQTFN--------IDPEYVDMSRRPGIGRQWYDD 301
+ ++ YVARY LKK +G +A D Y++ + + PEY MSR+PGIG++WY+
Sbjct 147 DLTAQSAGYVARYALKKVTGTQAEDHYRSIDLTTGEVTYVRPEYATMSRKPGIGKEWYEK 206
Query 302 HPECMEYDTISISTPDGGRKIRPPKYFDKLFDLEQPELMAAIKEKRKHFA 351
+ + M Y + + GG K P+++DKL + E PE + +KEKRK FA
Sbjct 207 YKKDM-YPSNQTPSVGGGVKNGIPRFYDKLMEKEDPEQLEIVKEKRKEFA 255
Lambda K H a alpha
0.321 0.139 0.444 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 2430365381262