bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
49,011,213 sequences; 17,563,301,199 total letters
Query= Contig-2_CDS_annotation_glimmer3.pl_2_5
Length=383
Score E
Sequences producing significant alignments: (Bits) Value
gi|494822881|ref|WP_007558289.1| hypothetical protein 65.9 1e-08
gi|575094358|emb|CDL65740.1| unnamed protein product 58.9 2e-06
gi|547226428|ref|WP_021963491.1| putative uncharacterized protein 58.5 3e-06
gi|575094344|emb|CDL65728.1| unnamed protein product 56.6 1e-05
gi|490418711|ref|WP_004291034.1| hypothetical protein 54.3 7e-05
gi|565841291|ref|WP_023924572.1| hypothetical protein 52.0 4e-04
gi|575094319|emb|CDL65706.1| unnamed protein product 49.3 0.003
gi|490477386|ref|WP_004347763.1| hypothetical protein 46.6 0.018
gi|575094301|emb|CDL65691.1| unnamed protein product 45.8 0.035
gi|649555290|gb|KDS61827.1| hypothetical protein M095_3809 45.4 0.039
>gi|494822881|ref|WP_007558289.1| hypothetical protein [Bacteroides plebeius]
gi|198272097|gb|EDY96366.1| hypothetical protein BACPLE_00802 [Bacteroides plebeius DSM 17135]
Length=344
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 46/66 (70%), Gaps = 0/66 (0%)
Query 44 SSNSKNMQINKMNNEFNAREAEKARQYQTEMWNKTNEWNSPKNIRKRLQEAGYNPYLGMD 103
S+N N+QI +M+NE+N + E+ + + +MWN NE+NS + RKRL+EAG NPY+ MD
Sbjct 42 STNQANIQIAQMSNEYNREQLERQIEQEWDMWNAENEYNSASSQRKRLEEAGLNPYMMMD 101
Query 104 SSNVGT 109
+ G+
Sbjct 102 GGSAGS 107
>gi|575094358|emb|CDL65740.1| unnamed protein product [uncultured bacterium]
Length=328
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/69 (41%), Positives = 43/69 (62%), Gaps = 0/69 (0%)
Query 41 GTSSSNSKNMQINKMNNEFNAREAEKARQYQTEMWNKTNEWNSPKNIRKRLQEAGYNPYL 100
++NS NMQI +MNNE++ R EK Y TEMW K ++NS N ++ ++AG NPY+
Sbjct 22 AVDNTNSTNMQIAQMNNEWSERMMEKQMAYNTEMWEKVADYNSLPNKMQQARDAGVNPYM 81
Query 101 GMDSSNVGT 109
+ + G+
Sbjct 82 ALSGNAFGS 90
>gi|547226428|ref|WP_021963491.1| putative uncharacterized protein [Prevotella sp. CAG:1185]
gi|524103380|emb|CCY83991.1| putative uncharacterized protein [Prevotella sp. CAG:1185]
Length=416
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 139/320 (43%), Gaps = 59/320 (18%)
Query 38 NLFGT---SSSNSKNMQINKMNNEFNAREAEKARQYQTEMWNKTNEW------------- 81
N+FG+ S +N N+QI +MNNE+N R K +Y +M+N+ E+
Sbjct 19 NIFGSKSQSDTNKTNLQIAQMNNEYNERMFNKQLEYNQDMFNQQVEYDQKKMEQQNNFNA 78
Query 82 -------------NSPKNIRKRLQEAGYNPYLGMDSSNVGTaqsigssspasaap----- 123
NS K R RL+ AG NPYL M N G ++ SS + +P
Sbjct 79 RMQNEAIGAQQVYNSAKAQRARLEAAGLNPYLMMSGGNAGAVSAVSGSSGSGGSPSPMGV 138
Query 124 ---piqnnpMQ-----FDGIQNALSTAIQMDNATNVSNAEVFNLQGQKS---LADANAAD 172
+ MQ F G+ + T + + V +A+ F+L Q S + + A+
Sbjct 139 NPPTASSAVMQAFRPDFSGVTGIIQTLLDIQAQKGVRDAQAFSLGEQASGFKIENKYKAE 198
Query 173 ILSNIDWYKLTPEY-----RNWLQTTGMSRAQLSFNTD----RQNLENMQWTNKIQRAQR 223
L D Y +Y + L +R Q F++D ++ EN Q+T ++ RAQ
Sbjct 199 KLL-WDIYNSKADYNLKNSQESLNNMSFARLQAMFSSDVSKAQREAENAQFTGELIRAQT 257
Query 224 TDILLSN--EAKRIINKYldssqslqlkllanqsFQAFASGRLSLQQCKTEVTKQLMNMA 281
L AK + KY D +L +++ Q + A+G+ S Q + + L +
Sbjct 258 ACQQLQGLLGAKEL--KYYDQKVLQELAIMSAQQYSLVAAGKASEAQARQAIENALNLVE 315
Query 282 ETEGKKISNKVASETADQLI 301
+ EG K+ N V +TA+ LI
Sbjct 316 QREGIKVDNYVKQKTANALI 335
>gi|575094344|emb|CDL65728.1| unnamed protein product [uncultured bacterium]
Length=368
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/71 (41%), Positives = 46/71 (65%), Gaps = 4/71 (6%)
Query 39 LFGTSSSNSKNMQINKMNNEFNAREAEKARQYQTEMWNKTNEWNSPKNIRKRLQEAGYNP 98
+FG SS + + +M E+ ++EA+K R +Q +MWN+ NE+N P KRL+EAG NP
Sbjct 36 MFGQSSD--QRFALGQM--EWQSQEAQKQRDFQLDMWNRNNEYNKPDEQMKRLEEAGINP 91
Query 99 YLGMDSSNVGT 109
+ M +S+V +
Sbjct 92 WQSMGNSSVAS 102
>gi|490418711|ref|WP_004291034.1| hypothetical protein [Bacteroides eggerthii]
gi|217986638|gb|EEC52972.1| hypothetical protein BACEGG_02723 [Bacteroides eggerthii DSM
20697]
Length=368
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 29/45 (64%), Gaps = 0/45 (0%)
Query 65 EKARQYQTEMWNKTNEWNSPKNIRKRLQEAGYNPYLGMDSSNVGT 109
E + YQTEMWNK NE+N P R RL+ AG NPY+ M+ + G
Sbjct 83 EDNKAYQTEMWNKQNEYNDPSAQRARLEAAGLNPYMMMNGGSAGV 127
>gi|565841291|ref|WP_023924572.1| hypothetical protein [Prevotella nigrescens]
gi|564729909|gb|ETD29853.1| hypothetical protein HMPREF1173_00035 [Prevotella nigrescens
CC14M]
Length=396
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (57%), Gaps = 0/72 (0%)
Query 38 NLFGTSSSNSKNMQINKMNNEFNAREAEKARQYQTEMWNKTNEWNSPKNIRKRLQEAGYN 97
N FG S+NS N++I + N N + + ++ +M +K NE+ P N RKR ++AG N
Sbjct 23 NGFGQKSANSTNLRIARETNAANFQMMQYQNEFNQKMLDKQNEYALPINQRKRFEDAGIN 82
Query 98 PYLGMDSSNVGT 109
PY + + GT
Sbjct 83 PYFALSQISSGT 94
>gi|575094319|emb|CDL65706.1| unnamed protein product [uncultured bacterium]
Length=396
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 33/64 (52%), Gaps = 11/64 (17%)
Query 45 SNSKNMQINKMNNEFNAREAEKARQYQTEMWNKTNEWNSPKNIRKRLQEAGYNPYLGMDS 104
+N N +I NN+FN R MWN NE+N P R RL+ AG NPYL MD
Sbjct 59 TNQANREIADQNNKFNER-----------MWNLQNEYNRPDMQRARLEAAGLNPYLMMDG 107
Query 105 SNVG 108
+ G
Sbjct 108 GSAG 111
>gi|490477386|ref|WP_004347763.1| hypothetical protein [Prevotella buccalis]
gi|281300714|gb|EFA93045.1| hypothetical protein HMPREF0650_1081 [Prevotella buccalis ATCC
35310]
Length=362
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 35/54 (65%), Gaps = 7/54 (13%)
Query 57 NEFNAREAEKARQYQTEMWNKTNEWNSPKNIRKRLQEAGYNPYL---GMDSSNV 107
NE N E+A +Q EM + +WN+ N+R+R+++AGYNPYL G SSNV
Sbjct 47 NEVN----ERAMAFQREMNQRNEDWNNESNVRQRVEDAGYNPYLYQNGAMSSNV 96
>gi|575094301|emb|CDL65691.1| unnamed protein product [uncultured bacterium]
Length=437
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 32/51 (63%), Gaps = 2/51 (4%)
Query 59 FNAREAEKARQYQTEMWNKTNEWNSPKNIRKRLQEAGYNPYLGMDSSNVGT 109
F +E R + +MW TN++N+P ++RL++AG NPY+ MD N GT
Sbjct 54 FTHQENALQRDFARQMWKDTNDYNTPIAQKQRLEQAGMNPYVNMD--NAGT 102
>gi|649555290|gb|KDS61827.1| hypothetical protein M095_3809 [Parabacteroides distasonis str.
3999B T(B) 4]
gi|649557306|gb|KDS63785.1| hypothetical protein M095_3404 [Parabacteroides distasonis str.
3999B T(B) 4]
gi|649559158|gb|KDS65545.1| hypothetical protein M096_4689 [Parabacteroides distasonis str.
3999B T(B) 6]
gi|649560567|gb|KDS66875.1| hypothetical protein M095_2448 [Parabacteroides distasonis str.
3999B T(B) 4]
gi|649561016|gb|KDS67303.1| hypothetical protein M095_2410 [Parabacteroides distasonis str.
3999B T(B) 4]
gi|649562727|gb|KDS68911.1| hypothetical protein M096_3341 [Parabacteroides distasonis str.
3999B T(B) 6]
Length=288
Score = 45.4 bits (106), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 24/56 (43%), Positives = 33/56 (59%), Gaps = 0/56 (0%)
Query 45 SNSKNMQINKMNNEFNAREAEKARQYQTEMWNKTNEWNSPKNIRKRLQEAGYNPYL 100
+N NM+I K ++ +E EKA Q +MWN NE+NSP R++ AG NP L
Sbjct 31 TNKANMEIAKYQAQWQQQENEKAYQRSLKMWNLQNEYNSPTQQMARIRAAGLNPNL 86
Lambda K H a alpha
0.313 0.127 0.364 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 2379307285017