bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           49,011,213 sequences; 17,563,301,199 total letters





Query= Contig-32_CDS_annotation_glimmer3.pl_2_2

Length=104
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|564267178|ref|XP_006272404.1|  PREDICTED: PH and SEC7 domain-c...  37.4    1.1
gi|557258310|ref|XP_006014858.1|  PREDICTED: PH and SEC7 domain-c...  37.0    1.2
gi|654978665|ref|WP_028428252.1|  ATP-dependent helicase              35.8    3.2
gi|505000197|ref|WP_015187299.1|  hypothetical protein                35.0    4.3


>gi|564267178|ref|XP_006272404.1| PREDICTED: PH and SEC7 domain-containing protein 1 [Alligator 
mississippiensis]
Length=788

 Score = 37.4 bits (85),  Expect = 1.1, Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 37/73 (51%), Gaps = 8/73 (11%)

Query  3    FSLFSPRVDYNRIHSAIKLSKEFFDVREKQSLQNLFSDSQSFESDWSDIFWNQTEERQRE  62
                +P++  ++I  ++KL KE F       L +L  DS +  S  +D  W + EE QR 
Sbjct  206  LPTLTPQIQ-DKIRDSVKLIKENF-----APLAHLEPDSGT--SSATDAPWTEREEEQRR  257

Query  63   FAESGLGSACRSE  75
             A +GL S C SE
Sbjct  258  KANNGLHSPCHSE  270


>gi|557258310|ref|XP_006014858.1| PREDICTED: PH and SEC7 domain-containing protein 1-like [Alligator 
sinensis]
Length=858

 Score = 37.0 bits (84),  Expect = 1.2, Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 37/73 (51%), Gaps = 8/73 (11%)

Query  3    FSLFSPRVDYNRIHSAIKLSKEFFDVREKQSLQNLFSDSQSFESDWSDIFWNQTEERQRE  62
                +P++  ++I  ++KL KE F       L +L  DS +  S  +D  W + EE QR 
Sbjct  276  LPTLTPQIQ-DKIRDSVKLIKENF-----APLAHLEPDSGT--SSATDAPWTEREEEQRR  327

Query  63   FAESGLGSACRSE  75
             A +GL S C SE
Sbjct  328  KANNGLHSPCHSE  340


>gi|654978665|ref|WP_028428252.1| ATP-dependent helicase [Streptomyces sp. TAA040]
Length=1474

 Score = 35.8 bits (81),  Expect = 3.2, Method: Composition-based stats.
 Identities = 23/66 (35%), Positives = 31/66 (47%), Gaps = 9/66 (14%)

Query  27   DVREKQSLQNLFSDSQ--SFESDWSDIF-----WNQTEERQREFAESGLGSACRSELSAL  79
            D RE+ S +   +D Q   F  + SD       W  T ERQRE + S     CRSE   L
Sbjct  604  DPRERPSEKQQQADQQHARFRDETSDFLAFLDLWRYTRERQRELSSSAFRRMCRSEF--L  661

Query  80   VHSKVK  85
             H +++
Sbjct  662  NHLRIR  667


>gi|505000197|ref|WP_015187299.1| hypothetical protein [Gloeocapsa sp. PCC 7428]
 gi|434391635|ref|YP_007126582.1| hypothetical protein Glo7428_0839 [Gloeocapsa sp. PCC 7428]
 gi|428263476|gb|AFZ29422.1| hypothetical protein Glo7428_0839 [Gloeocapsa sp. PCC 7428]
Length=269

 Score = 35.0 bits (79),  Expect = 4.3, Method: Compositional matrix adjust.
 Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 0/48 (0%)

Query  55   QTEERQREFAESGLGSACRSELSALVHSKVKHRHLNDMNNFFTERANY  102
            + E+R +E  +SG+GS  RS L ++ +  +    L +MN+   +R NY
Sbjct  219  EVEQRAQEQVQSGIGSGIRSLLLSIGYILIGWTGLRNMNSLPPDRPNY  266



Lambda      K        H        a         alpha
   0.319    0.130    0.382    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 433549962150