bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 49,011,213 sequences; 17,563,301,199 total letters Query= Contig-3_CDS_annotation_glimmer3.pl_2_1 Length=56 Score E Sequences producing significant alignments: (Bits) Value gi|583217484|gb|EWC78242.1| hypothetical protein C923_01061 34.3 2.9 >gi|583217484|gb|EWC78242.1| hypothetical protein C923_01061 [Plasmodium falciparum UGT5.1] Length=270 Score = 34.3 bits (77), Expect = 2.9, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 26/51 (51%), Gaps = 3/51 (6%) Query 4 KEVNICISEIRNLLRSIDRSFVPNHVYDKSSLVYRNAADIRYIADILCKSL 54 K + C EIRNL + F P+H+ D+ L Y DI Y DI C S+ Sbjct 192 KTLYFC-QEIRNL--YLVNFFTPSHIIDEHILAYSYGQDIIYFEDIYCLSI 239 Lambda K H a alpha 0.326 0.138 0.397 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 435833352594