bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           49,011,213 sequences; 17,563,301,199 total letters





Query= Contig-6_CDS_annotation_glimmer3.pl_2_8

Length=65
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|496050826|ref|WP_008775333.1|  predicted protein                   37.7    0.056
gi|330930892|ref|XP_003303187.1|  hypothetical protein PTT_15305      35.0    2.3
gi|654351803|ref|WP_027844945.1|  stem cell self-renewal protein ...  33.5    9.9


>gi|496050826|ref|WP_008775333.1| predicted protein [Bacteroides sp. 2_2_4]
 gi|229448890|gb|EEO54681.1| hypothetical protein BSCG_01606 [Bacteroides sp. 2_2_4]
Length=69

 Score = 37.7 bits (86),  Expect = 0.056, Method: Compositional matrix adjust.
 Identities = 24/69 (35%), Positives = 38/69 (55%), Gaps = 4/69 (6%)

Query  1   MKITPNQWIELVKLISTFIIGVITALTVQSC--TASMSVFWKNQNSKQDSQQTTQQEVDS  58
           MK+T +QW  +++ I T ++ +   + V SC  T SMSV   N +S Q  +Q ++   DS
Sbjct  1   MKLTSDQWNRIIQAIVTAVVTICNIILVSSCAVTMSMSVQKNNSSSTQQIEQKSESRNDS  60

Query  59  VTIK--PQF  65
            T+   P F
Sbjct  61  TTLDLSPNF  69


>gi|330930892|ref|XP_003303187.1| hypothetical protein PTT_15305 [Pyrenophora teres f. teres 0-1]
 gi|311320953|gb|EFQ88712.1| hypothetical protein PTT_15305 [Pyrenophora teres f. teres 0-1]
Length=380

 Score = 35.0 bits (79),  Expect = 2.3, Method: Composition-based stats.
 Identities = 19/61 (31%), Positives = 35/61 (57%), Gaps = 3/61 (5%)

Query  8   WIELVKLISTFIIGVITALTVQSCTASMSVFWKNQNSKQDSQQT---TQQEVDSVTIKPQ  64
           WIE  KL  TFI+  + +  V + TASM ++ +  + +Q  +Q    ++Q+ + + +K Q
Sbjct  6   WIEEEKLKKTFIVATLASTLVGTFTASMGLWERVADRRQQHRQKAKDSKQDGEIIELKKQ  65

Query  65  F  65
           F
Sbjct  66  F  66


>gi|654351803|ref|WP_027844945.1| stem cell self-renewal protein Piwi [Mastigocoleus testarum]
Length=764

 Score = 33.5 bits (75),  Expect = 9.9, Method: Composition-based stats.
 Identities = 17/46 (37%), Positives = 30/46 (65%), Gaps = 1/46 (2%)

Query  6    NQWIELVKLISTFIIGV-ITALTVQSCTASMSVFWKNQNSKQDSQQ  50
            N W E+++L   FI  + ITA +  +CT +++ F++N + KQ+ QQ
Sbjct  169  NFWAEIIELEGQFIPALTITAKSNFNCTINLAEFYQNHSYKQNPQQ  214



Lambda      K        H        a         alpha
   0.316    0.124    0.355    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 440996816904