bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggnogv4.proteins.all.fa
           14,875,530 sequences; 5,112,597,290 total letters



Query= Contig-13_CDS_annotation_glimmer3.pl_2_1

Length=378
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  484018.BACPLE_00802                                                 77.4    4e-13


> 484018.BACPLE_00802
Length=344

 Score = 77.4 bits (189),  Expect = 4e-13, Method: Compositional matrix adjust.
 Identities = 57/152 (38%), Positives = 82/152 (54%), Gaps = 24/152 (16%)

Query  10   NEMNFKINQMNNEFNAKEAEKARAFQLDMWNKENAYNTPSAQRERMEQAGYNAY--MNPA  67
            N+ N +I QM+NE+N ++ E+    + DMWN EN YN+ S+QR+R+E+AG N Y  M+  
Sbjct  44   NQANIQIAQMSNEYNREQLERQIEQEWDMWNAENEYNSASSQRKRLEEAGLNPYMMMDGG  103

Query  68   DAGSASGMSSTTSASASSP----AVMQATDFSSLGEVGVR-LAQEL-------------K  109
             AGSAS M+S  +  A  P    A MQ  D S L   G+R +A E              +
Sbjct  104  SAGSASSMTSPAAQPAVVPQMQGATMQPADMSGLS--GLRGIASEFIATLKAQEDIRGQQ  161

Query  110  LFSEKKGLDIRNFSLKDYLKAQIDKMRGETNW  141
            L +E  G +I N    D L A ++K R E+ +
Sbjct  162  LINE--GQEIENQYKADKLLADLEKTRTESGF  191



Lambda      K        H        a         alpha
   0.311    0.124    0.347    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 714589971720