bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggnogv4.proteins.all.fa
           14,875,530 sequences; 5,112,597,290 total letters





Query= Contig-17_CDS_annotation_glimmer3.pl_2_4

Length=313
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  406984.CPK_ORF00729                                                 40.4    0.072


> 406984.CPK_ORF00729
Length=121

 Score = 40.4 bits (93),  Expect = 0.072, Method: Compositional matrix adjust.
 Identities = 29/106 (27%), Positives = 48/106 (45%), Gaps = 11/106 (10%)

Query  2    RYVTAACGDCYECRKQKQRQWMVRMSEENRQTPNAYFLTLTIDDKSYKQIKQKYNLKDNN  61
            R+V   C  C  CR Q  + W  R   E        FLTLT DDK         +L    
Sbjct  18   RWVLMPCLKCRFCRTQHAKVWSYRCVHEASLYEKNCFLTLTYDDK---------HLPQYG  68

Query  62   DIATKAIRLCLERVR-KLTGKSVKHWFITELGHEKTERLHLHGIVW  106
             +    ++L L+R+R +++   ++++   E G  K +R H H +++
Sbjct  69   SLVKLHLQLFLKRLRDRISPHKIRYFGCGEYG-TKLQRPHYHLLIF  113



Lambda      K        H        a         alpha
   0.318    0.136    0.408    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 529812359880