bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggnogv4.proteins.all.fa
14,875,530 sequences; 5,112,597,290 total letters
Query= Contig-1_CDS_annotation_glimmer3.pl_2_3
Length=87
Score E
Sequences producing significant alignments: (Bits) Value
521003.COLINT_02688 35.0 0.73
> 521003.COLINT_02688
Length=156
Score = 35.0 bits (79), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 17/33 (52%), Positives = 23/33 (70%), Gaps = 2/33 (6%)
Query 43 YRMLRKVSNIEDAKMLVDEIWQMKS--FANTIE 73
YRM+ V +IEDAK+L+D Q+KS NT+E
Sbjct 76 YRMIICVRSIEDAKLLIDGCPQIKSLNLGNTLE 108
Lambda K H a alpha
0.313 0.125 0.345 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 127940762400