bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggnogv4.proteins.all.fa 14,875,530 sequences; 5,112,597,290 total letters Query= Contig-33_CDS_annotation_glimmer3.pl_2_1 Length=174 Score E Sequences producing significant alignments: (Bits) Value 484018.BACPLE_00805 60.5 2e-08 > 484018.BACPLE_00805 Length=545 Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 35/79 (44%), Positives = 45/79 (57%), Gaps = 7/79 (9%) Query 64 MLPELAESLKKKNNTDANGAFPQFKGLLKYINIRDYQLFSKRLRKYLSKKIGKYEKIHSY 123 M P+L +K+ N N +KG Y++ R+ QLF KRLRKYL K G +KI + Sbjct 96 MTPQLMNEYQKRVNYRIN-----YKGRFPYLSKRELQLFMKRLRKYLDKYEG--QKIRFF 148 Query 124 VVSEYSPKTLRPHFHILFF 142 EY P + RPHFHIL F Sbjct 149 ATGEYGPLSFRPHFHILLF 167 Lambda K H a alpha 0.324 0.139 0.425 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 143714426400