bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggnogv4.proteins.all.fa
           14,875,530 sequences; 5,112,597,290 total letters





Query= Contig-35_CDS_annotation_glimmer3.pl_2_3

Length=243
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  371731.Rsw2DRAFT_1088                                               53.9    8e-06


> 371731.Rsw2DRAFT_1088
Length=407

 Score = 53.9 bits (128),  Expect = 8e-06, Method: Compositional matrix adjust.
 Identities = 44/187 (24%), Positives = 79/187 (42%), Gaps = 44/187 (24%)

Query  24   ESVQTLLYTDVQKFLKRLRKAYK-----SRLRFFCAGEYGEQTARPHYHMILYGWEPTDL  78
            ++ +   Y DV+ F+KRL  A +     +++RF CAGE G++  R H+H+++Y     D+
Sbjct  26   DAARMFQYADVRAFIKRLAAAVRYADPTAKVRFLCAGEQGDRNGRCHWHLVIY--SGVDI  83

Query  79   KQLYKIHH---------------NGYYTS--------------EWLEKLWGNGQIQIAQA  109
              L K+                  G  T               +W   LWG+G +   +A
Sbjct  84   TTLGKVQGFPKRRPEERKRVKPVKGLLTERFDMLTVGKDERRLDW--TLWGHGYVTFQEA  141

Query  110  VPETYRYVAGYVTKKMYEIDGKKANAYYELGQQKPFAC----MSLKPGLGDAYYQEHKEE  165
                  YV  Y  K  + ++  K++      + + FA     MS +P +G+A+   + E 
Sbjct  142  DEGGMHYVLSYCLKDQFTVE--KSHETMRESKTENFATGLFRMSKRPAIGEAWLYAYLEG  199

Query  166  IWKQGYI  172
            +   G +
Sbjct  200  LEASGGV  206



Lambda      K        H        a         alpha
   0.318    0.134    0.412    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 330579197470