bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggnogv4.proteins.all.fa 14,875,530 sequences; 5,112,597,290 total letters Query= Contig-38_CDS_annotation_glimmer3.pl_2_1 Length=90 Score E Sequences producing significant alignments: (Bits) Value 340322.cgR_1795 32.7 2.5 > 340322.cgR_1795 Length=95 Score = 32.7 bits (73), Expect = 2.5, Method: Compositional matrix adjust. Identities = 14/40 (35%), Positives = 21/40 (53%), Gaps = 0/40 (0%) Query 14 IEAMSNLIQAEAAKNSGLAAVENAATNRAQQAWRELTTQY 53 +E SNL+ AE N+ VEN NR ++W +T + Sbjct 56 LEEGSNLVDAETLMNNDPFHVENVLDNRVIRSWNPVTKDF 95 Lambda K H a alpha 0.314 0.127 0.356 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 126601964700