bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggnogv4.proteins.all.fa
           14,875,530 sequences; 5,112,597,290 total letters





Query= Contig-3_CDS_annotation_glimmer3.pl_2_3

Length=515
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  469590.BSCG_01608                                                     103   8e-21


> 469590.BSCG_01608
Length=497

 Score =   103 bits (256),  Expect = 8e-21, Method: Compositional matrix adjust.
 Identities = 100/379 (26%), Positives = 151/379 (40%), Gaps = 59/379 (16%)

Query  6    PFIKCTSPIAIHR--GSSIFLYPCRKCECCQVSRQKSLSTMLALEESHAKYCYFINPTYN  63
            PF KC  P  I         + PC  C+ C +++    +    LE   AK+  FI  TY 
Sbjct  5    PFCKCLHPKRIMNPYTKESMVVPCGHCQACTLAKNSRYAFQCDLESYTAKHTLFITLTYA  64

Query  64   DFNIPAVRVPDDADFGSIAEFEIITPRLKRDKYFEPYIVDY-DVDLEKSIGQLCEQRDEY  122
            +  IP     D  +                     PY  D  D +  + +G      DE 
Sbjct  65   NRFIPRAMFVDSIE--------------------RPYGCDLIDKETGEILGPADLTEDER  104

Query  123  SRLYSRSHKFVPHDVIYLLHYPDIQRFIKRFRIYA-KRKFNASCRYYVVGEYGTNSLRPH  181
            + L ++ + F   DV YL    D+Q F+KR R Y  K+K +   RY+ VGEYG    RPH
Sbjct  105  TNLLNKFYLF--GDVPYL-RKTDLQLFLKRLRYYVTKQKPSEKVRYFAVGEYGPVHFRPH  161

Query  182  WHLLLFFDSDELAQDLERCYHPTDKELRKDPDLRFYNDHDCAECLRTLWKFGFATSERTN  241
            +HLLLF  SDE  Q                          C+E +   W FG    + + 
Sbjct  162  YHLLLFLQSDEALQI-------------------------CSENISKAWTFGRVDCQVSK  196

Query  242  KSAYYYVSGYVTSTSRFPLCLSALSR-PHSLHSRFFGQTLAEEEIQR--AIVSQDFEYFR  298
                 YV+ YV S+   P    A S  P S+HS+  GQ   + + ++  ++  ++F    
Sbjct  197  GQCSNYVASYVNSSCTIPKVFKASSVCPFSVHSQKLGQGFLDCQREKIYSLTPENF----  252

Query  299  VHYRYSSKGYQIPYALWRSYYSRFFPVFTGLVNMSNEKIFRLFEYWEEIGKLSGYYRVSN  358
            +       G    + +WRS YS F+P   G V  S+ +    +  ++    L    + + 
Sbjct  253  IRSSIVLNGKYKEFDVWRSCYSFFYPRCKGFVTKSSRERAYSYSIYDTARLLFPDAKTTF  312

Query  359  QVQWLKNWYYYYYSRPLET  377
             +      Y YY+  P ET
Sbjct  313  SLAKEIAIYIYYFHNPKET  331



Lambda      K        H        a         alpha
   0.325    0.140    0.451    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 1102063279870