bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggnogv4.proteins.all.fa
14,875,530 sequences; 5,112,597,290 total letters
Query= Contig-4_CDS_annotation_glimmer3.pl_2_3
Length=638
Score E
Sequences producing significant alignments: (Bits) Value
483216.BACEGG_02721 377 3e-119
> 483216.BACEGG_02721
Length=578
Score = 377 bits (968), Expect = 3e-119, Method: Compositional matrix adjust.
Identities = 245/661 (37%), Positives = 342/661 (52%), Gaps = 106/661 (16%)
Query 1 MAHFTGLKELQNRPHKSGHDISAKNCFTAKVGELLPVWTDFAIPNCTYRINLEYFTRTRP 60
MA+ LK ++N+P ++G D+S K FTAK GELLPV +P T++INL+ FTRT+P
Sbjct 1 MANIMSLKSIRNKPSRNGFDLSFKKNFTAKAGELLPVMVKEVLPGDTFKINLKAFTRTQP 60
Query 61 VQTSAYTRIREYFDFFAVPCDLIWKSFDSAVIQMGEKAP-IQSKDLLTNLTVKGDLPYCS 119
V T+A+ RIREY+DFF VP DL+W ++ + QM + S D N + G++PY +
Sbjct 61 VNTAAFARIREYYDFFFVPYDLLWNKANTVLTQMYDNPQHAVSIDPTRNFVLSGEMPYMT 120
Query 120 LSDLSFALKFASGNPASLGNKVSVSPGFG----NIFGYNRGDVNHKLLSMLDYGNVVDKS 175
+ AS N +S + N FGYNR + KLL L YGN
Sbjct 121 SEAI-----------ASYINALSTASALADYKSNYFGYNRSKSSVKLLEYLGYGNY---- 165
Query 176 ANWIGTNANRWWNRRVATADSAVYSQKYNVNLAVNLFFLATYQKIYQDFFRWSQWENADP 235
+++ + WN A NL N+F L YQKIY DF+R SQWE P
Sbjct 166 ESFLTDD----WNTAPLMA-----------NLNHNIFGLLAYQKIYSDFYRDSQWERVSP 210
Query 236 TSYNFDWYRGSGNLFGSSDLAAAIPASSDYWKRDNLFSLRYANWNKDKFMGILPNSQFGD 295
+++N D+ GS S +L A S+++++ N F LRY NW KD F G+LP+ Q+G+
Sbjct 211 STFNVDYLDGS-----SMNLDNAY--STEFYQNYNFFDLRYCNWQKDLFHGVLPHQQYGE 263
Query 296 LAVVDLGTISASGSKIPVGAYDGVNDSGTFKQFQTSSESYNGSSDKTTQIYPRNPDSISV 355
AV + T +G T F T S P + S
Sbjct 264 TAVASI-TPDVTGKL-------------TLSNFSTVGTS---------------PTTASG 294
Query 356 RADSNLWAVLGESSDLKLKFSVLALRQAEALQKWKEITQSVDTNYRDQIKAHFGVSVPQS 415
A NL A D S+L LRQAE LQKWKEITQS + +Y+DQ++ H+GVSV
Sbjct 295 TATKNLPAF-----DTVGDLSILVLRQAEFLQKWKEITQSGNKDYKDQLEKHWGVSVGDG 349
Query 416 EAHMAKYIGGVARNLDISEVVNNFLPGPGNDSSQAYIYGKGVGSGQGSMTFNTGSGYYIL 475
+ + Y+GGV+ ++DI+EV+N + G S+ A I GKGVG G + FN+ Y ++
Sbjct 350 FSELCTYLGGVSSSIDINEVINTNITG----SAAADIAGKGVGVANGEINFNSNGRYGLI 405
Query 476 MCIYHAVPLLDYSISGPDGQNLVTSVEDLPIPEFDNIGMESVPAVELMNSSLYSNVNSAD 535
MCIYH +PLLDY+ D L + D IPEFD +GM+S+P V+LMN L S N++
Sbjct 406 MCIYHCLPLLDYTTDMLDPAFLKVNSTDYAIPEFDRVGMQSMPLVQLMN-PLRSFANASG 464
Query 536 KILGYSPRYYNWKTKIDRIHGAFTTTLKDWV------------------APIDDSFLYSL 577
+LGY PRY ++KT +D+ G F TL WV PI+ S
Sbjct 465 LVLGYVPRYIDYKTSVDQSVGGFKRTLNSWVISYGNISVLKQVTLPNDAPPIEPS----- 519
Query 578 FGDSLSTYKGVTWPFFKVNPNTLDDLFAVKVDSTWETDQLLVNCNVGCYVTRPLSADGVP 637
+ + + + + FFKVNP+ LD +FAV+ TDQ L + R L DG+P
Sbjct 520 --EPVPSVAPMNFTFFKVNPDCLDPIFAVQAGDDTNTDQFLCSSFFDIKAVRNLDTDGLP 577
Query 638 Y 638
Y
Sbjct 578 Y 578
Lambda K H a alpha
0.318 0.134 0.414 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 1446858795720