bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggnogv4.proteins.all.fa
           14,875,530 sequences; 5,112,597,290 total letters





Query= Contig-9_CDS_annotation_glimmer3.pl_2_3

Length=561
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  469590.BSCG_01608                                                     123   1e-27


> 469590.BSCG_01608
Length=497

 Score =   123 bits (309),  Expect = 1e-27, Method: Compositional matrix adjust.
 Identities = 86/274 (31%), Positives = 123/274 (45%), Gaps = 49/274 (18%)

Query  13   RCYHGKNVINPYTGQVMYQPCGECPACLTRKASIRSMRVSLQKSLSKYTYFINPSYDQKY  72
            +C H K ++NPYT + M  PCG C AC   K S  + +  L+   +K+T FI  +Y  ++
Sbjct  8    KCLHPKRIMNPYTKESMVVPCGHCQACTLAKNSRYAFQCDLESYTAKHTLFITLTYANRF  67

Query  73   VPKCQIFKVHPDDPDSTLYELVVKPRRRGDYKMVQKVYSKKYKKVIKKEVDAPLSYTDDF  132
            +P+           DS                 +++ Y      +I KE    L      
Sbjct  68   IPRAMFV-------DS-----------------IERPYGCD---LIDKETGEILG-----  95

Query  133  SYYFNASEEYIRDFREQATLNVNGKYPHLQDYYGYISRKDGQLFVKRLRKHIFKFAGKYE  192
                        D  E    N+  K+    D   Y+ + D QLF+KRLR ++ K     E
Sbjct  96   ----------PADLTEDERTNLLNKFYLFGDV-PYLRKTDLQLFLKRLRYYVTK-QKPSE  143

Query  193  KVHIYLVSEYGPVHFRPHFHILLFTDSDRVAKNIGRIVNSSWKFGRCDWSASRGDAESYV  252
            KV  + V EYGPVHFRPH+H+LLF  SD   +     ++ +W FGR D   S+G   +YV
Sbjct  144  KVRYFAVGEYGPVHFRPHYHLLLFLQSDEALQICSENISKAWTFGRVDCQVSKGQCSNYV  203

Query  253  AGYVNSFSRLPYHLKQDDRVKPYS----RFSNGF  282
            A YVNS   +P   K    V P+S    +   GF
Sbjct  204  ASYVNSSCTIPKVFKASS-VCPFSVHSQKLGQGF  236



Lambda      K        H        a         alpha
   0.322    0.137    0.418    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 1229548503040