FEATURES             Location/Qualifiers
     gene            31..870
                     /locus_tag="Alpa_01"
     CDS             31..870
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_01"
                     /translation="MMNGGSAGVAQSAGNGATAASSGNAVMQPFQADYSGIGSSIGNIFQYDLMQSEKSQLQGARQLSDAKAMETLSNIDWGNLTAETRNYLRSTGLARAQLGYVKEQQEVDNMAMTGLIMRAQRSGMLLDNEAKGILNKYLDQEQQLDLNVKAADYYQRMSAGYLSYAETKKALADEALAAARTRGQKISNEVASRIAESQIAANIAANQSSEAYHNEELKLGLSQDNARSKNIEEWYRSRNEKKRYKYYDADKWVEYGTNIGNIIGNFLPRRIVSKTFPRR"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:hypothetical.protein.BACPLE"
                     /inference="similar to AA sequence:MV_prot:putative.VP2"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            1341..1514
                     /locus_tag="Alpa_02"
     CDS             1341..1514
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_02"
                     /translation="MEKYYLCSIQSKLNPSQCETVLVPVDEVSDFVSSNLRPDCILIFSQCSTFKAISHEK"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:hypothetical.protein"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            1597..1905
                     /locus_tag="Alpa_03"
     CDS             1597..1905
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_03"
                     /translation="MNPELMKFVEWLLHRNIHFTVTSAFRTEKQNNECNGAKTSQHLTGDAIDLKPLYFSVDEFISMIKDSPFKFDQLIKYRSFIHISFARGRKPRLMELNFTDRK"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:putative.peptidase.M15A"
                     /inference="similar to AA sequence:INSD:WP_008629051.1"
                     /inference="similar to AA sequence:INSD:WP_029886185.1"
                     /db_xref="InterPro:IPR013230"
                     /db_xref="InterPro:IPR009045"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            1902..3620
                     /locus_tag="Alpa_04"
     CDS             1902..3620
                     /product="predicted protein"
                     /protein_id="gnl|USP|Alpa_04"
                     /translation="MITKELQNKLATRCQHPRTVVNKYTHEPVVVSCGCCPSCVLRRSAVQTNLLTTYSAQFRYIYFVTLTYAPRFLPTLEVSIIETCSDDIADVPCVPNINELDDSDPNTYLFGFRNIPRSASIKLKNSTVERTFKDPEVKFSYPMKPKELLSILGKVKHDVPNRIPYICNRDLDLFLKRLRSYYLDEKLRYYAVSEYGPTSFRPHWHLLLFSNSERFSETICENISKAWSYGRCDASLSRGFAAPYVASYVNSFVALPNFYTQMPKVVRPKSFHSIGFTESNLFPRKVRITEIDEVTNKCLDGVSVERNGRFRTIKPTWPYLLRLFPRFSDPIRKLPSSVYQLLLSALSAPARVIRGGCADITCDPFNVNAPSKQSILSFCKQYLNYVDNYGKSNECRNFLSPQANLPYSDVLILTECRLYDGTDLESTHRLSRVYRFFLGISKFIRTYSVDGCSELFWSSGTPGGELFGRDRFLRIISEKIVTFWNRYDYNRLVDFYQTLEDANDRDLVDFELRNYSFRYNRPPDNKEKPYNKLPLVRRLAAVALMKCRGKVKHKKLNDLSGLFFYQDDPDIV"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:putative.VP4"
                     /inference="similar to AA sequence:INSD:WP_021963494.1"
                     /inference="similar to AA sequence:INSD:WP_008775335.1"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            3641..5482
                     /locus_tag="Alpa_05"
     CDS             3641..5482
                     /product="putative uncharacterized protein"
                     /protein_id="gnl|USP|Alpa_05"
                     /translation="MASYTGMSNLQNHPHRSGFDIGRKNAFTAKVGELLPVYWDISMPGDKYRFNIEYFTRTQPVETSAYTRLREYFDFYAVPLRLLWKSAPSVLTQMQDVNKIQALSLTQNLSLGTFLPSIPLSVLSDAMYLLNGRSWTPGNSSSLKNMFGFDRSDLCYKLLSYLGYGNLISSESTGRWWSTSVSSKNDASYTQRYIQNNYVNLFPLLAYQKIYQDFFRWSQWEASNPSSYNVDYFTGVSPSLISSLLSVSPDYWKSGTMFDLKYCNWNKDMLMGVLPNSQFGDVAVLDIPDSGDSNVVLGTDSHKSSVGIASAITSKTAPFPLFALDASPENPIPINSKLRLDLSSLKSQFTVLALRQAEALQRWKEISQSGDSDYREQIRKHFGVKLPQALSNMCTYIGGVSRNLDISEVVNNNLATEGDTAVIAGKGVGAGNGSFEYTTTEHCVVMCIYHAVPLLDYTLTGQDGQLLVTDAESLPIPEFDNIGMEVLPMTQVFNSPKASIVNLFNAGYNPRYFNWKTKLDVINGAFTTTLKSWVSPVTESLLSGWFCFGYNKDDAAPDTKVIMNYKFFKVNPSVLDPIFGVNADSTWDTDQLLVNSYIGCYVVRNLSRDGVPY"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:putative.VP1"
                     /inference="similar to AA sequence:INSD:WP_021963493.1"
                     /inference="similar to AA sequence:INSD:WP_004291032.1"
                     /db_xref="InterPro:IPR016184"
                     /db_xref="InterPro:IPR003514"
                     /GO_component="GO:0019028 - viral capsid"
                     /GO_function="GO:0005198 - structural molecule activity"
                     /db_xref="eggNOG:bacteNOG05989"
                     /db_xref="eggNOG:bactNOG180503"
                     /db_xref="eggNOG:bctoNOG21249"
                     /db_xref="eggNOG:NOG133500"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            5497..5991
                     /locus_tag="Alpa_06"
     CDS             5497..5991
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_06"
                     /translation="MIGKFNSLSSLEQGSGLIPNVEPDAFAVAPKFDSTEQLRVEIDDTDETRPVRYTSDVCLILHTKDLASRAGLAVASKFGQSKQPISQIQQIMDTMSDEDLLATIRSRYIQSPSEIIAWSKELSAYAENLESQAQELIDAENARQEAEKAAAAPAAASADAPSTE"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:hypothetical.protein"
                     /note="1 probable transmembrane helix predicted by TMHMM"
ORIGIN
        1 cgtaggaagg ctggtttaaa tccttattta atgatgaatg gaggttctgc tggtgttgct 
       61 cagtctgctg gtaatggtgc tactgctgct tcttccggaa atgccgttat gcagcctttt 
      121 caggctgatt attccggcat aggttcttcc attggtaata tttttcaata tgatttgatg 
      181 caatctgaaa agtctcaatt gcaaggtgct aggcagcttt ctgatgccaa agccatggaa 
      241 actctttcta atattgattg gggaaacctt actgctgaaa ctcgtaatta tttgaggtct 
      301 actggactag ctcgtgctca acttggttac gttaaggaac aacaagaagt tgataacatg 
      361 gcaatgaccg gtcttattat gcgtgctcag cgttctggca tgctcctcga taatgaggct 
      421 aaaggcattt tgaataagta tcttgaccaa gaacagcagc ttgatttaaa tgtcaaagct 
      481 gcggattact accagcgcat gtctgccgga tatctttctt atgctgaaac taaaaaagct 
      541 ttggctgatg aagctttggc tgctgctcgg actcgtggtc aaaaaatttc taatgaggtt 
      601 gcttctcgta ttgctgaatc tcaaattgct gccaatattg cggctaatca atcttctgag 
      661 gcttatcata atgaagaact caagcttggt ttgtctcagg ataatgctcg cagtaagaat 
      721 attgaggaat ggtaccgttc tagaaatgaa aagaaaagat ataagtatta tgatgctgat 
      781 aaatgggttg aatatggtac taatatcggt aatattatag gcaatttctt gcctcgtagg 
      841 attgtttcta agacctttcc tcgtcgttga tattcttttt tttacattta cccggccgta 
      901 ttcgatacgt gccgggtttt gttgtttgga gtaacttccg gcaaccgcgc gaagcgtggt 
      961 tatgcacctc ctgaatttcg ggagacctcg tcgactgaaa ttcaaaccgt aggttatagt 
     1021 actttcatcc tttaaacttg acgtttgcaa cgcgtaagca attttccgta aatcacttct 
     1081 ttctcgtcgc cgctataccc cttaaaatat aatttggtga aacctacatg agtttgcccg 
     1141 tagggaaagc gatttacctc atcgctttca gtctcccctt gtctttatag cgcaaactca 
     1201 cagaccagct tgccacccac atattttatt gtttatttat gttaataatt tgtatgagca 
     1261 tttgtttttt tcaaatcttt attcttatct ttgttctgtc ttaaaaaaaa cgatgtctaa 
     1321 tttattaaat ttttaagttt atggaaaagt attatttgtg ttctatccaa tcaaagttaa 
     1381 atcctagtca gtgcgaaact gttcttgttc ctgttgatga agtttctgat ttcgtctctt 
     1441 caaaccttcg tccggactgt attcttattt tttctcaatg ttcaactttt aaagcaattt 
     1501 ctcatgaaaa gtgaaactaa atctaaaatt tggtctgcag ttattgcggc tgctgtcagt 
     1561 cttcttacgt ctattgctca aatattttcg taagtcatga atccagaatt aatgaaattt 
     1621 gttgagtggc ttctacaccg gaatattcat tttactgtta cttccgcttt tcgtactgaa 
     1681 aaacagaata atgagtgtaa tggtgctaag acttctcagc atttaaccgg tgatgctatt 
     1741 gatttgaaac ctctttattt ttctgttgat gagtttattt caatgataaa agattctcct 
     1801 tttaaatttg accaactcat aaaatatcga agttttattc atatttcttt tgctcgtggc 
     1861 cgcaagcctc gtctaatgga acttaatttt actgatagaa aatgattact aaggaattgc 
     1921 agaataagct ggcaactcgt tgtcagcatc cccgtacggt tgtcaataag tatacacatg 
     1981 aacctgttgt tgtttcttgt ggttgttgtc cttcatgtgt tcttcgtcgt tctgctgttc 
     2041 agacgaatct tcttaccact tattctgctc aattccgtta tatttatttt gttactctta 
     2101 cttatgctcc tcgctttctt cctactttgg aggtttcgat tattgaaact tgttcggatg 
     2161 atattgcgga tgtgccctgc gttcccaata ttaatgagtt ggacgatagt gaccctaata 
     2221 cttatttgtt tggttttcgc aacattcctc gttccgcctc tattaaattg aagaattcta 
     2281 ctgttgaacg aacttttaaa gatcctgagg ttaagttttc ttatcctatg aaacctaagg 
     2341 aacttttatc tatccttgga aaggttaaac atgatgttcc aaataggatt ccttatattt 
     2401 gtaatcgtga cttggattta tttttaaaac gtttaagaag ttattacctg gatgaaaaat 
     2461 tacgttacta cgctgtatca gaatacggcc ctaccagttt ccgcccgcat tggcatttgc 
     2521 tattgttttc caattccgag cgattctcgg aaactatttg tgaaaatata tctaaggctt 
     2581 ggtcttacgg acgttgtgat gcatcattgt cgagaggatt cgcagctccg tatgttgcgt 
     2641 cgtatgttaa cagttttgtc gctttaccca acttttatac tcaaatgcca aaagtggtgc 
     2701 gacctaaatc cttccattcc attggattta cagaatcaaa tctctttcct cgaaaggtac 
     2761 gaattaccga aattgacgaa gttaccaata agtgtcttga tggtgtcagc gttgagcgca 
     2821 atggacgttt tcgcacaatt aaacctactt ggccgtatct ccttcgatta ttcccccgat 
     2881 tttcggaccc tattcgtaaa cttccatcga gtgtttacca attattatta tctgcgctct 
     2941 ctgcgcccgc acgagtcatt cgtggcggat gtgcagatat aacttgtgat ccatttaatg 
     3001 taaatgctcc ttctaagcaa agcattttgt ctttttgtaa acaatattta aattatgtag 
     3061 ataattatgg aaaatcaaat gaatgtagga atttcctctc tcctcaggcg aatttaccgt 
     3121 atagtgatgt tctcattctt actgaatgtc gtttgtacga tggtactgat ttggaatcta 
     3181 ctcatcgtct ctcccgcgta taccgctttt ttctcggaat ttcaaaattt attcgaacgt 
     3241 attctgtgga cggatgttca gaactcttct ggtccagcgg cactcctgga ggagagctct 
     3301 ttggtcgaga caggttctta cgaataatct ctgaaaaaat agttactttt tggaatcgtt 
     3361 atgattataa tcgccttgtg gatttttatc aaaccttgga ggatgctaat gatagagatt 
     3421 tggtagattt tgagcttcgt aactattcct ttcgttataa caggcctcct gataataagg 
     3481 aaaaacctta caataaactt cctcttgttc gtcgtttggc tgctgtggcg ttgatgaaat 
     3541 gtcgaggtaa ggtcaaacac aagaagctta atgatttgtc tggtcttttc ttttatcagg 
     3601 atgaccctga tattgtttaa ttttttaatt tttttttact atggcttctt acactggtat 
     3661 gtccaatctt cagaatcacc cgcatcgttc tggatttgat attggacgca aaaatgcatt 
     3721 cactgcaaaa gttggtgagc ttctcccggt ttactgggat atttctatgc ctggtgataa 
     3781 gtatcggttt aacattgagt attttactcg tactcaaccc gttgaaactt ctgcttatac 
     3841 ccggttgcgt gagtattttg atttttatgc tgtgccgtta cgtcttcttt ggaagtccgc 
     3901 tccttctgtg ttaacacaaa tgcaggatgt taataagatt caagccttgt ctttgactca 
     3961 aaatttgtcg cttggaactt ttttaccttc gattccctta tctgtactta gtgatgctat 
     4021 gtatcttctt aatggtcgta gttggactcc tggtaattct tcttctctaa agaatatgtt 
     4081 tggtttcgac cgttcggatt tgtgctataa gcttttgagt tatcttggct atggtaattt 
     4141 aatttcatct gaatccactg gtcgttggtg gtctacttcg gtatcttcta agaatgatgc 
     4201 ttcttatact cagcggtata ttcagaataa ttatgtaaat cttttccccc ttcttgctta 
     4261 tcaaaagatt tatcaggatt ttttccgttg gtctcaatgg gaagcttcta atccttcttc 
     4321 ttataatgtg gactatttta cgggagtttc cccctcttta atttcctccc ttctttctgt 
     4381 gtctcctgac tattggaaat ctggtacaat gtttgacctc aaatattgta attggaacaa 
     4441 ggatatgttg atgggtgttc ttcctaattc ccaatttgga gatgttgctg ttttggatat 
     4501 tcctgattca ggagattcta atgtcgtttt gggaactgac tcgcataaga gttctgttgg 
     4561 tattgcctct gctatcactt ctaaaactgc tccgttcccc ctttttgcac ttgatgcttc 
     4621 tcctgaaaat cctataccta taaattccaa gcttcgtctt gatttatcat ctcttaagtc 
     4681 tcaattcacc gttcttgctc ttcgtcaagc tgaagctctc caacgttgga aagaaatcag 
     4741 tcaatctggt gatagtgact accgtgaaca aattcgcaag cattttggtg tgaaattgcc 
     4801 ccaagctctt tctaatatgt gtacctatat tggtggtgtt tctcgtaacc ttgacatcag 
     4861 tgaggttgtt aacaataacc ttgccactga aggtgatact gctgttattg ccggtaaagg 
     4921 tgttggtgct ggtaacggtt ctttcgagta tactactact gagcattgtg tcgttatgtg 
     4981 tatttatcat gctgttcctc tgcttgatta cacacttact ggacaggatg gccaattatt 
     5041 ggtaaccgat gctgaatctc ttcctattcc tgagtttgat aacattggta tggaggttct 
     5101 tcctatgaca caagttttca attctccgaa agcttctatt gttaatttgt ttaatgccgg 
     5161 ttataacccc cgttatttca attggaaaac aaagcttgat gttatcaatg gagcttttac 
     5221 tactaccctt aaatcttggg tttctcctgt tacagaatct ctcctttctg gatggttttg 
     5281 ttttggatac aataaagatg atgctgcccc ggatactaag gttattatga attacaagtt 
     5341 cttcaaggtt aatccttctg ttcttgatcc aatttttggt gtgaatgcgg attctacttg 
     5401 ggatactgac caattattgg ttaactctta tatcggttgc tatgttgtcc gtaatttgtc 
     5461 tcgtgatggt gtaccttatt aaagtttgtt ttatttatga ttggaaaatt taattctttg 
     5521 agtagtttgg aacaaggttc tgggcttatt cctaatgttg aacctgatgc ctttgctgtt 
     5581 gctcctaaat ttgattctac tgagcagctt cgtgtagaaa ttgatgatac tgacgaaact 
     5641 cgccctgtgc gttatacttc tgatgtttgt ttgattcttc atactaagga ccttgcctct 
     5701 cgtgctggtc ttgctgttgc ttctaagttt ggacaaagta aacagcctat ttctcaaatc 
     5761 cagcaaataa tggatactat gtccgatgag gaccttttgg ctacaattcg ttctcggtat 
     5821 attcaatctc cttctgagat tattgcctgg tctaaggagt tgtcggctta tgctgaaaat 
     5881 ctcgagtccc aagcgcaaga attgattgat gctgaaaatg ctagacaaga agcagaaaaa 
     5941 gcggctgctg ctcccgctgc tgcttccgct gatgctccct ctactgagta atgggtcttc 
     6001 ttggttcaat cactggtggt ctccttggcc ttggttcttc tgcggttcag aattcgcaga 
     6061 atagacaaaa tgtccgggaa accaaccaga tgaattataa gattaatcag atgaataacc 
     6121 agtttaacga acgtatggcg atacagcagc gcaactggca ggaaaatatg tggaataaag 
     6181 aaaatgctta taacactgct tctgcccaac gtcaacgtct cgaggaggct ggtttaaatc 
     6241 cttatttaat gatgaatgga ggttc 
//
