FEATURES             Location/Qualifiers
     gene            complement(568..1011)
                     /locus_tag="Alpa_01"
     CDS             complement(568..1011)
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_01"
                     /translation="MRNFAYKNPDFVKDDYVPELVENHPCYQESVYDSVMYDETSDGDLIQCDMTQILLNQEKYRRLLGDMNIQNILAQMHPTQSTVMDGMTDEDRFACVISRHCQTMSERQAVLQQLASEKSELTAYAEAMLAEQQSAPDPSPAPDTSVQ"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:hypothetical.protein"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(1022..2761)
                     /locus_tag="Alpa_02"
     CDS             complement(1022..2761)
                     /product="putative uncharacterized protein"
                     /protein_id="gnl|USP|Alpa_02"
                     /translation="MSDFNPLNRARISTHRSSFDLSSKKLFTAKVGEILPCYWQIAIPGNKYRISSDWFTRTVPVNTAAYTRIKEYYDFYAVPLRLISRALPQAFTQMTDYITSAASSTANSSTLTSVPFVSQTIFNAFFQTANAGDQPNTRDDAGLPIVYGSCKLLDMLGYGSMIASNNPSKAAITKKYLGVDSLSDADNPLVYQTSQTVNALPFLAYQKIYYDFFSNSQWEKHKAYAYNVDYWSGAGNIGLVTDMVQLRYANYPKDYFMGMLPSSQYGSVAVLPSISSSSDSRSLLYYEPSSSATAALQSAGGSSSSVRLSQTVSSSQGIRLNSDLSALSIRATEYLQRWKEIVQFSSKDYSDQMAAQFGIKAPEYMGNHSHYIGGWSSVININEVVNTNLDADSSQASIAGKGISSNSGHTLTYDCGAEHQIIMCVYHAVPMLDWNLTGQAPQLTVTAISDFPQPAFDQLGMQSVPSLNLQNNPGRNVSGALGYNLRYWQWKSNIDTVHAGFRAGAAYQSWVAPLDGWNVLTSSGAWSYQSMKVRPQQLNSIFVPQVDSANCSVAFDQLLCNVNFQVYAVQNLDRNGLPY"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:putative.VP1"
                     /inference="similar to AA sequence:INSD:WP_021963493.1"
                     /inference="similar to AA sequence:INSD:WP_008775336.1"
                     /db_xref="InterPro:IPR003514"
                     /db_xref="InterPro:IPR016184"
                     /GO_component="GO:0019028 - viral capsid"
                     /GO_function="GO:0005198 - structural molecule activity"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(2789..4468)
                     /locus_tag="Alpa_03"
     CDS             complement(2789..4468)
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_03"
                     /translation="MKFSPDLLKAADHCQHRSFITNRYTGARIAVDCGQCDYCIHKRAQKASMRVKTAGSAFKYSYFVTLTYDNEHIPLMRCKVLHSEYEDVVGISGDIHFGDEYHHYIPVSEYQCDDSSALRHIFFEQVQGTVPYDREIKEYVPVKDNWFLSIDAIRSFIHKTQALGKTDYPVAEQYGRDNLIPFLNYVDVQNYIKRLRKYLFKVLGSYESLHFYAVGEYGPVHFRPHFHLLLFTNSDEVAEVLRQCHDKSWKFGRSDFQRSAGGSASYVSSYVNSLCSAPLLYRSCRAFRPKSRASVGFFEKGCDFVEDEDPYAQIEKKIDSVVNGRCYNFNGVSVWSTPPMSYVRTLLPRFSSARNDDSTAIIRILRAVHSTPARIARFGFIDYNQDSVLSLVRAYYQYLQSNSILSDDDKIILHNARCLTRFVNCSSDVDIESFINKLYRLFLYVYKFFRNWHLPSFGSNLDAYSNRIRFIIKTGIEYETKKNYESLRDVFNIRSANPDISDCMFALPANGQERDVLSNVSRETVQLLEQLRYRSAAYCRDMIKHKKLNDANGIFNRMV"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:putative.VP4"
                     /inference="similar to AA sequence:INSD:WP_008775335.1"
                     /inference="similar to AA sequence:INSD:CDL65688.1"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(4594..4869)
                     /locus_tag="Alpa_04"
     CDS             complement(4594..4869)
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_04"
                     /translation="LEIQENLIPLRRIEVTAIINALKIIKIMQKFIISVKEKQTGRDVIPPYIVNSLEGLGHYSERVSQLGLIVIVDSIREENDFVELKTQRDEE"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(5369..5875)
                     /locus_tag="Alpa_05"
     CDS             complement(5369..5875)
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_05"
                     /translation="MEFAGRLTSAQEAQILLDSEAQQVLNKYLDEQQQADLFIKGQTLSNLYAQGSLTEAQYKTEMAKAVKTAAETNGIRINNKIASQTADSLIYANIQSNRARGLSSLWDSKNTNVLKNIEYSKDKALRDYYKWSSKHKQKDVDSYELRNAVDYGTRIFQGIGNSIGTKGR"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:putative.VP2"
                     /note="1 probable transmembrane helix predicted by TMHMM"
ORIGIN
        1 atcggcgacc ggtagacgca gtccaataac ctgactggcc aacaccaata ttacgataat 
       61 tggtatcgcc taagatctgc tgcatcttat acggagtaag agcagcgttc tgttcagcat 
      121 taatcatagc agcacgagcc tgcgccatag aagcaagggc agaaccaaca tccgaaaagt 
      181 cgggtcgaaa agcctgtaaa ctaggggcag aagcggcaga agcagcagca ccaccagaag 
      241 cgggagacct agagccggcc atagcggcag aaccttgaac aaacggattc aaaccacggg 
      301 aaatcatcgc attgggggaa ttataggaat tattcattcc ccacattttt tcctgccagt 
      361 cacgctgaat ctgagcctgg tgggcattaa atgcattatt ctcacgatta atatcgatac 
      421 tagtctgatt tgtcttgttc tgagaagcgg atccgatcgc attaccagca agagaagcac 
      481 cagcagcaat aataccacca agaacaagcg gagcaataca cttttcggag agccccatta 
      541 aggggctttc tccaatatca tagaacctca ttgaacagaa gtgtcagggg cgggcgacgg 
      601 atcgggcgct gactgttgct ctgccaacat cgcttcggca taagccgtta gctcagactt 
      661 ctcactagcc aattgctgta acacagcttg gcgttccgac attgtctgac aatgacggga 
      721 aattacacaa gcaaatcggt cttcgtcagt cataccatcc ataacagtag actgagtagg 
      781 gtgcatttga gcaagaatgt tctgtatatt catgtcacca agtaagcgac gatatttttc 
      841 ctgatttaac aagatttggg tcatatcgca ctgaatcaga tcaccatcag aagtttcatc 
      901 atacatcaca gaatcatata cagattcctg ataacatgga tgattttcaa ccaattcagg 
      961 aacataatca tccttaacaa aatcaggatt tttataagca aaatttctca taacaaacaa 
     1021 attaataagg taaaccatta cgatccaagt tttgaacagc atatacttgg aaattaacat 
     1081 tacacaacag ttgatcaaac gcaacagaac aattggcaga atcaacctga ggaacaaata 
     1141 tagaatttaa ctgttgggga cgaactttca tagactgata agaccaagca ccagaggaag 
     1201 tcaacacatt ccaaccatca agaggagcaa cccaagactg ataagcagca ccggcacgaa 
     1261 atccagcatg aacagtatca atattagatt tccactgcca gtagcgaaga ttataaccta 
     1321 aagcaccaga aacattacga ccgggattat tctgaagatt cagagaagga acagactgca 
     1381 taccaagctg atcaaatgca ggctgcggaa agtcagatat agcagtaaca gtcaactgag 
     1441 gagcctgacc ggtcaaattc caatccaaca taggcacagc atggtataca cacataatta 
     1501 tctgatgttc agcaccacaa tcataagtaa gagtgtgtcc agaattactg gatatgcctt 
     1561 taccagcaat agaggcttgg gaagagtcgg catcaagatt agtattaact acttcgttaa 
     1621 tgttaattac gctagaccaa ccaccaatat aatgtgaatg gttacccata tactcgggag 
     1681 ctttaatacc aaactgagca gccatctgat ccgaataatc tttactactg aactgaacta 
     1741 tctctttcca acgctgaaga tattctgtag cacgaattga gagagcagaa agatctgaat 
     1801 taaggcggat accttgagac gacgatacag tttgagacaa acgaacagat gaggaactac 
     1861 ctccagcaga ttgcaaagca gctgtagcag aagaagaggg ctcataataa agcaaggaac 
     1921 gagaatcaga agaagaagaa atagacggta aaacagctac cgaaccatat tgagaagaag 
     1981 gaagcatacc cataaaatag tccttaggat aattcgcata acgcagttga accatatccg 
     2041 taaccaatcc aatattacca gcaccggacc aatagtctac attataggca taagccttgt 
     2101 gtttctccca ttgactgtta ctaaagaaat cataatagat tttctgataa gcaagaaatg 
     2161 ggagagcatt aactgtctgc gaagtctgat aaaccaaagg attgtcagca tcactaagag 
     2221 aatcaacgcc taaatatttt ttagtaatag cagccttaga tggattatta gacgcaatca 
     2281 tagaaccata accaagcata tcaagtaact tacaggaacc gtaaacaata ggaaggccgg 
     2341 catcgtctcg agtattaggc tgatcaccgg cattcgccgt ttggaaaaac gcattaaata 
     2401 tagtttgtga aacaaaagga acagaagtaa gtgtagatga attagcagta gagctagccg 
     2461 cactagtaat ataatctgtc atctgggtaa acgcctgagg aagcgcacga gaaatcagac 
     2521 gtaacggcac agcatagaaa tcataatact ccttaatacg agtataagcg gccgtattaa 
     2581 caggaacggt acgggtaaac caatccgaag aaatacgata cttattacca ggaatagcaa 
     2641 tctgccaata gcatggtaag atctcaccaa ccttagcagt gaataacttc ttcgaactta 
     2701 agtcgaatga agatcgatgc gtagatattc tcgctcgatt caagggatta aaatcactca 
     2761 taatgtaata aattaaaagt tataaaaatt aaaccatacg gttaaaaata ccattagcat 
     2821 cattcaactt cttatgctta atcatatcac gacagtatgc cgcactacgg taccggagtt 
     2881 gctcaagaag ttgaaccgtt tcacgtgaaa catttgacaa gacatcacgc tcctgcccgt 
     2941 tcgcaggcaa cgcaaacata caatccgata tgtccgggtt agcggagcgt atgttgaata 
     3001 catctcgtag actttcataa ttttttttcg tctcatactc tatacctgtt ttaatgataa 
     3061 accgaatacg attggagtaa gcatcaagat tagaaccgaa ggaaggcaaa tgccaattac 
     3121 ggaagaattt atagacatat aagaacagcc gatataactt attaataaaa gattcaatat 
     3181 cgacatcact agaacagttg acgaaccgag taaggcaccg agcattatgt aatataatct 
     3241 tgtcatcatc agatagaatc gaattagatt gaagatattg ataataagca cgtacaagac 
     3301 tcaagaccga gtcttggtta tagtcaatga agccgaacct cgcaattctt gctggcgtcg 
     3361 aatgtacagc tcgaagaatt ctaataatcg cagtactatc gtcattgcga gcagacgaga 
     3421 atcgggggag taaggtacgg acatacgaca tgggaggagt tgaccaaaca ctgacaccat 
     3481 tgaagttgta gcatcttccg ttaacgacag aatcgatttt tttctcaatc tgcgcataag 
     3541 ggtcttcgtc ttccacgaaa tcgcagccct tttcaaaaaa tccgacagat gctcgtgact 
     3601 tgggtctaaa tgcgcggcat gaacgatata agaggggagc agagcacaag ctgttaacgt 
     3661 aactcgatac gtacgaagca gatccgccag cggaacgttg gaaatctgaa cgaccgaatt 
     3721 tccaactctt atcgtgacat tgtcgtagaa cctctgcgac ttcgtccgag ttcgtgaata 
     3781 ataacaaatg gaaatgcgga cggaaatgga ctggaccata ttcgcccaca gcgtagaaat 
     3841 gtaacgattc ataagagcct aatactttaa ataaatattt acgtaaacgt tttatatagt 
     3901 tctggacatc aacataattc agaaagggaa taaggttatc acgaccgtat tgttcagcaa 
     3961 cgggatagtc cgttttacca agggcttgcg tcttatggat aaaactacga atagcatcga 
     4021 tagaaagaaa ccaattgtcc ttaacaggaa catattcctt aatttcacgg tcatacggaa 
     4081 cagtaccctg tacctgttcg aaaaatatat gacgcaatgc ggagctatca tcacattgat 
     4141 attcagaaac agggatataa tgatggtatt catcaccaaa atggatatct cctgaaatgc 
     4201 ctacaacatc ctcatattca gagtgaagaa ccttacaacg cataagagga atatgctcat 
     4261 tatcatacgt aagtgtaaca aaataagaat acttaaaagc acttccagcg gtcttcacac 
     4321 gcatggacgc tttctgagca cgcttatgga tacaataatc gcattgacca caatctacgg 
     4381 caatgcgtgc accagtgtac ctattcgtaa taaacgaacg atgctgacaa tgatcagctg 
     4441 ccttaagcaa atcaggagaa aatttcatat aaccaagagc ctgtaatggc aataaatata 
     4501 aatataaaca ataaaatcaa tcaaacaccg atagcgctaa ggatatagcc taaagcagca 
     4561 gaaatagcgc caataacaat cttccaaata tgattactct tcatctctct gagttttaag 
     4621 ttcgacaaaa tcattttcct ctctaatcga gtccacaata acgataagac ccaattgaga 
     4681 aactcgttca gaataatgtc caagaccttc aagagaatta acaatataag gcggaataac 
     4741 atcacgacca gtttgttttt ctttaacgga aataataaac ttttgcataa ttttaataat 
     4801 ttttaaagca ttaataatag ctgtaacttc tatacgacgc aaaggtataa gattttcttg 
     4861 tatttccaaa atttttttta gaaattgtgg gaacaggacc atttgtgatg gagtgtgagt 
     4921 tgtacgttta tggacaaggg ataggagaat ccgagaggat aactcggatt tgcttcgcat 
     4981 acaactaggg gcttcgctta attaacactc attaagagag ttgagatctg aacaagtata 
     5041 agcactggaa ttgacaaagt gtaactcctg gacttgacaa aatgtaactc ctggacttga 
     5101 caaaatgtaa ctcctggact tgacaaaatg taactcctgg acttgacaaa atgtaactcc 
     5161 tggacttgac aaaatgtaag atatatacaa aaagggtata ggcacggcag gtcagataga 
     5221 acctgccttt gcgcaccttc gtgctaaaat accggagcgg aacgctccta taaggaagtc 
     5281 gctccgctcc atatttcgat caggccctac gcgggcggcg ggtgtatatc gctcaaacgc 
     5341 cgcgatgggc ttttagtcct gaagtacgct acctaccctt agtaccgatt gaattgccaa 
     5401 taccttggaa tatacgtgta ccataatcca cagcattacg taactcataa gaatcaacat 
     5461 ccttctgttt atgtttagaa ctccacttat aataatcacg gagagcctta tccttggaat 
     5521 actcaatatt cttaagaaca ttggtatttt tcgaatccca caatgaagat agacctcgag 
     5581 cacgattaga ctgaatatta gcataaatca gagaatcagc agtttgggag gcaatcttat 
     5641 tattaatacg aataccatta gtctcagcag cagtttttac agctttagcc atttcagttt 
     5701 tatactgagc ttctgtaaga gaaccttgag catacaaatt agataaggtc tgacctttaa 
     5761 taaacagatc agcctgttgt tgttcatcaa ggtacttatt aagcacctgt tgggcttcag 
     5821 aatcaaggag aatctgcgct tcttgagcag aagtaagacg accggcaaac tccatattct 
     5881 taagctcctg atattcctta gattgatcca ggagtgcaga tcggcgaccg gtagacgcag 
     5941 tccaataacc tgactggcca acaccaatat tacgataatt ggtttctttc tatcgatgct 
     6001 attcgtagtt ttatccataa gacgcaa 
//
