FEATURES             Location/Qualifiers
     gene            complement(1340..3175)
                     /locus_tag="Alpa_01"
     CDS             complement(1340..3175)
                     /product="predicted protein"
                     /protein_id="gnl|USP|Alpa_01"
                     /translation="MIPKEELLTKYLFTECLRPQRIVNPYSHDVIFAPCGRCKSCIMNKSNFATAYAMNMATHFKYCYFVTLTYKDIFLPYLSVEVVRRSGNRYLFDENFETMVSTSDPRLLTPEYYHDRDLSLDPAQNEVEQVFDIGFQSIPRDVSVKSKGSFRFRSFDDEPLKFCIPMKLTELQDILIKANGRYDYGKKKVVYPSLADCKLQIPVLQSRDIELFFKRLRRNLDSHGFTSSKICYYVVSEYGPQTYRPHWHCLLFFNSEEITQTLREDISKAWAYGRIDYSLSRGAAASYVASYVNSAACLPFFYVGQKEIRPRSFHSKGFGSNKIFPKSSDVSEISKISDLFFDGVNVDSNGKVINIRPVRSCELAVFPRFSNDFFSDSDTCCKLFQSVIETPERLVSRGYLGIDTPSFGSDGFRLSDLVRAYSEYYERNFTDFSFSLRFLRGYRTRDYSDELIFREARLFDGYVFNKDMIFGRLYRLFAKVLRCFRFWNLKQYTDSWSLKAAVKKIWSYGWEYWKKKEYRFLTTYFEYLEGCNDDERLFLLVRTSGSGLATDSPHSWTYTQREDYVNCLPDDLYKRYMKTLKWLTARTEKVLKDKVKHKEFNDMQGVLLFSD"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:putative.VP4"
                     /inference="similar to AA sequence:INSD:WP_021963494.1"
                     /inference="similar to AA sequence:INSD:WP_008775335.1"
                     /db_xref="InterPro:IPR021723"
     gene            complement(3180..3371)
                     /locus_tag="Alpa_02"
     CDS             complement(3180..3371)
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_02"
                     /translation="MEKQVLKKEEKTFVNGFIVSVQLPGVPPKQSFVDTSSSLAETVASILDSTPHAIILVQASVNL"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
     gene            complement(3388..3609)
                     /locus_tag="Alpa_03"
     CDS             complement(3388..3609)
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_03"
                     /translation="MSKKTIMKITATQWIEIVKLIATFVIGVITTLFVHSCTLSLSVAKNNTNSTQKTEQTSTSSVDSTRININSKY"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="protein motif:Phobius:1.01"
                     /note="1 probable transmembrane helix predicted by Phobius with cleavage site between residues  and  "
                     /inference="protein motif:TMHMM:2.0"
                     /inference="similar to AA sequence:MV_prot:hypothetical.protein"
                     /inference="similar to AA sequence:MV_prot:hypothetical.protein.BACEGG.02719"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(4200..4427)
                     /locus_tag="Alpa_04"
     CDS             complement(4200..4427)
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_04"
                     /translation="MKKNYYQLQVYYYQKGYITIYAYSGFRSNANRKFRSYLASNFPNYQSSVFRVLTYSSIMSMLHGYPSISCASFNP"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(4521..5672)
                     /locus_tag="Alpa_05"
     CDS             complement(4521..5672)
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_05"
                     /translation="VLLLDHLIQLNNNSFVQFGIPPLVAAGLASGAASLVGNLFGTSSSNSKNMQINKMNNEFNAREAEKARQYQTEMWNKTNEWNSPKNIRKRLQEAGYNPYLGMDSSNVGTAQSIGSSSPASAAPPIQNNPMQFDGIQNALSTAIQMDNATNVSNAEVFNLQGQKSLADANAADILSNIDWYKLTPEYRNWLQTTGMSRAQLSFNTDRQNLENMQWTNKIQRAQRTDILLSNEAKRIINKYLDSSQSLQLKLLANQSFQAFASGRLSLQQCKTEVTKQLMNMAETEGKKISNKVASETADQLIGALQWQYSSDEMFSRGYAGYAREAGKSRGKGDVAKGKLDEYNYSSRYWNTGIESIGRIGNGIGLPLMLGRGLRGPKAIKGFR"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="protein motif:Phobius:1.01"
                     /note="1 probable transmembrane helix predicted by Phobius with cleavage site between residues  and  "
                     /inference="similar to AA sequence:MV_prot:hypothetical.protein.BACEGG.02723"
                     /inference="similar to AA sequence:MV_prot:putative.VP2"
                     /inference="similar to AA sequence:INSD:WP_007558289.1"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(5638..6168)
                     /locus_tag="Alpa_06"
     CDS             complement(5638..6168)
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_06"
                     /translation="MENKISNKVCFGRGFRKVDPSISAVGFNPAVREKEIAVEIDPVSKFCIETIGEGPDKYYRYRSDISMLLHAKDTANKIGIEGLRYLSESRRTKTSAIQSQLDQMDDQLLLDTVKSRHLQSPSEILAWSESLIQVAHELETRVGAEIRKKYDEEIAAAAAASTVGSSASAGSPDSAE"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:hypothetical.protein"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(6180..6647)
                     /locus_tag="Alpa_07"
     CDS             complement(6180..6647)
                     /product="putative uncharacterized protein"
                     /protein_id="gnl|USP|Alpa_07"
                     /translation="LDYAISGQDSQLLCTSVEDLPIPEFDNIGMEAVPAITLFNSNAFDNDLESDFDFLGYNPRYWPWKSKIDRVHGAFLTTLKDWVAPIDDFYLNRWFASGGSSQASISWPFFKVNPNTLDSIFAVAADSTWESDQLLINCDVSCKVVRPLSQDGMPY"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:putative.VP1"
                     /inference="similar to AA sequence:INSD:WP_021963493.1"
                     /inference="similar to AA sequence:INSD:CDL65742.1"
                     /db_xref="eggNOG:bacteNOG05989"
                     /db_xref="eggNOG:bactNOG180503"
                     /db_xref="eggNOG:bctoNOG21249"
                     /db_xref="eggNOG:NOG133500"
                     /note="1 probable transmembrane helix predicted by TMHMM"
ORIGIN
        1 tttcagaaag gttattatta actacttcgg aaatatcaag attacgggca ataccaccaa 
       61 tatattgtgc catgtgagac atagaagcag gagtattaat accaaaatga gccttgatct 
      121 gatcacgata gttagtatct acagattgag taatttcttt ccatttctga agagcttcag 
      181 cctgacgaag ggcaagaata gaaaattcac ctcctaaaag agaacgcaca cctagagcag 
      241 aaccggcaac agaagaaggg ataccagaac caccagcaac gcgaattcga gaaggagttg 
      301 tactggaagt catagcatca tcagtataaa caggagtatg agttccagtt aaaggaggtt 
      361 tagcaatatt agtctcatta atagaattaa atacctcgac aggaacaaaa gtatcaatac 
      421 cttctacacc tgagactaca gcgacatcac cgaactggga attaggaaga agacccataa 
      481 acatgtcttt attccagtta caataacgga gagaaaacat attatcacgt ttccaataat 
      541 cattagatga tggaatagaa gaagcaatac caccattacc aaacaaatta ccagaaccgt 
      601 tataataatc tacattataa gccgtaggat cagcattttc ccattgagac caacgaaaga 
      661 aatcttgata aattttctga taagctaaaa gaggaaaaag ggaaacagaa acattctggg 
      721 aatacttctg agaataattt tgaacagcag aagacgtaaa agatgtatta aaccatcgat 
      781 ttgtagaagt tccaacattt gaagaagatg gttctacaaa attaccataa ttaaggtata 
      841 ataaaagctt atgagaagta tcacaacgag aataaccaaa aatattagaa taatccggaa 
      901 caacagaaac agtttgaccc aacgaaactc tattattcat aaaaattaaa gaagtgtata 
      961 aatcactcaa agtacaccaa ggaatatcag ttccaacagt aagaggatcg agtggagttt 
     1021 tagcttggac aggagcaact tcgcccatct gaatcacagc agaatcaaat gatttccaaa 
     1081 gaagatcaca aggaactgca taaaaatcaa aatactcacg aatacgagta taagcagccg 
     1141 tttgaacagg acgggttcga gtaaaataag ctaaatcaat atcataatca caactaggaa 
     1201 ttgcaaagtc ccaataaacg ggaagcaatt cacctacttt agcagtaaaa agatttttac 
     1261 taccaatatc aaaaccagcc ttatgaggat gattttgaag ttcttttaaa ccagtaaaat 
     1321 gtgccataaa tcaaattagt taatcagaaa ataataaaac accttgcata tcattaaact 
     1381 ccttatgttt aaccttatcc ttcagaacct tctccgtacg ggcggttaac catttaagag 
     1441 ttttcatata acgcttataa agatcatcag gaagacaatt tacataatcc tcacgctgag 
     1501 tataagtcca agaatgagga gaatcggtag caagaccaga gcctgaagtg cgaacaagaa 
     1561 gaaacaaacg ttcgtcatca ttacatcctt caagatactc gaaataggta gtcaagaaac 
     1621 gatattcttt ctttttccaa tattcccatc cataagacca aatcttctta acagcagcct 
     1681 ttaaagacca agaatcagta tattgtttta aattccagaa cctaaaacaa cggaggactt 
     1741 tagcaaataa acgatacaac ctaccaaaga tcatatcttt attgaataca taaccatcaa 
     1801 agagacgagc ttcacggaat atcaattcat cagagtaatc acgagttcga taacctctaa 
     1861 gaaaacgaag gctgaatgaa aagtcggtaa aattccgctc atagtattca gaataagcac 
     1921 gtacgagatc agataatcga aaaccatcag aaccaaagct aggagtatct attccaagat 
     1981 agccgcgcga aacgagacgt tcgggcgttt caatgacaga ctgaaataac ttgcaacaag 
     2041 tatcactatc tgagaaaaaa tcattagaga atcgggggaa taccgcaagc tcacacgacc 
     2101 gtacaggcct gatattgata accttgccat tagaatcgac gttaacgcca tcaaagaaga 
     2161 gatcggatat ctttgaaatt tctgaaacgt cggacgattt aggaaagatt ttattcgagc 
     2221 caaatccctt ggaatggaag gatcgaggac ggatttcttt ttgtccaaca taaaagaatg 
     2281 gtaaacaagc agcactatta acgtatgacg caacatagga agcagcggct ccacgggaga 
     2341 gagagtaatc gatacgaccg taggcccaag ccttagatat atcttctcga agcgtttggg 
     2401 tgatctcctc cgagttaaag aataataaac aatgccaatg cggacggtag gtttgaggtc 
     2461 cgtattctga tacaacgtag taacatattt tcgaggaagt gaatccatgt gaatctaaat 
     2521 ttcttcttaa acgtttaaaa aacaattcaa tatcgcgaga ctgaagaaca ggaatctgta 
     2581 acttacaatc agcaagagag ggataaacta cctttttctt accataatca taacgaccat 
     2641 tagccttaat taaaatgtct tgaagttcgg taagcttcat aggtatacag aatttaagag 
     2701 gttcgtcatc aaaggaacga aaacgaaatg atccttttga tttaacagaa acatcacgag 
     2761 gaatagactg aaaacctata tcaaaaactt gctcaacttc attctgagcc ggatcaagag 
     2821 aaagatcgcg atcatgataa tattcaggag ttaaaagtcg agggtcggag gtggaaacca 
     2881 tcgtctcaaa gttttcatca aaaagataac gattaccaga ccttcgaaca acctcgaccg 
     2941 acaagtaagg aagaaatata tctttatatg taagagtaac gaaataacaa tacttaaaat 
     3001 gagtagccat attcatagca taagccgtag caaaattcga cttattcata atacatgact 
     3061 tacaacgacc acacggggca aagataacat catgagaata agggtttaca attctctggg 
     3121 gtcgaagaca ttcagtaaaa aggtacttcg ttaataattc ttccttaggt atcatactat 
     3181 caaagattta cagaagcttg aaccaaaatg atagcatgag gggtagagtc aagaatagaa 
     3241 gcaactgttt ccgccaaaga actagaggta tctacaaatg actgtttcgg tggaacaccg 
     3301 ggcaattgaa ctgaaacaat aaaaccattc acaaaagttt tttcttcttt cttcaatact 
     3361 tgcttttcca taacaataaa atttaaatta gtacttggaa ttaatattaa tacgagtaga 
     3421 atctacagaa gaagtagaag tctgctcggt tttctgagta gaattggtat tgttcttagc 
     3481 aacagacaaa gaaagtgtgc aagaatgaac aaacaatgta gtaataacac caataacaaa 
     3541 tgtggcaatc aatttaacga tttcaatcca ctgagtagct gtaattttca taatagtttt 
     3601 tttagacatg caaaactaat aaaaaataat cgtgattagc aaatttatta actattatta 
     3661 tgaataaagc aatgtattag ggggtgtgtc atttttcgta tatatgacaa ggatagagag 
     3721 taattactaa gataaagtaa ttacccttcg ggaaaaatga aataggcttc gccaagagaa 
     3781 ttttttaaat tatacagggg gggatagtca gtatgattag gagagacagc aaccttaaaa 
     3841 aagagattag ggacagaagt gttcgctaaa gcgaatgcgc ctttggcgat atcaaggtgc 
     3901 taacgctcta gggcaaagcc ctagaaccct ttttttgtcg ctcgcgctgt acacgcagtt 
     3961 tcactgctat cggcaataaa ggggaggtgg aaaatccaac aaagttggag agacgtcccg 
     4021 aaaaggagtt aacgataaaa aaatgtatct gaatattata atgagcagaa ataaaaatag 
     4081 taaaagcgaa caattaataa taaataaaaa agctccggtg ggaaatctct ataatctgaa 
     4141 cgattataga aacgtccacg cggagcaata aagagtacaa aataatcact cgcgctatgt 
     4201 taaggattaa aagaagcaca actaatagag ggataaccgt gaagcatgga cataatagaa 
     4261 ctataagtca aaactctaaa aacagaagat tgataattag gaaaattaga agctaaatac 
     4321 gaacgaaatt tacgattagc attagaacga aaaccagaat aagcataaat tgtaatataa 
     4381 cctttctgat aataataaac ctgaagttga taataattct ttttcataac aatattggtt 
     4441 tttgattaca atacaaagat agtcataatg attaagataa cctaatcact atgactattt 
     4501 aacaatgtat ttaacgataa ttaacggaat cctttgatag ccttaggacc acgaagacca 
     4561 cgaccaagca ttaaaggtaa tccaatacca ttaccaatac gaccaataga ctcaatgcca 
     4621 gtattccaat aacgagaact ataattatac tcatcaagtt tacctttggc aacatctcct 
     4681 tttccacgag atttaccagc ttcacgagca taaccagcat aaccacggga gaacatctca 
     4741 tcagaggaat attgccattg aagagcacca atcaattgat cagcagtttc agaagcaacc 
     4801 ttattagaaa tcttcttacc ttcagtttca gccatattca taagttgttt agtaacttca 
     4861 gtcttacatt gctgaagaga caaacgtcca gaagcaaaag cctgaaaaga ctgattagcc 
     4921 aacaacttca attgcaagga ttgagaagaa tccaaatact tattaataat acgtttagcc 
     4981 tcattagata aaagaatatc agtgcgctga gcacgttgaa ttttattggt ccattgcata 
     5041 ttctcaagat tttgccgatc agtattgaaa gacaattgag cacgagacat accagtagtt 
     5101 tgtaaccaat tccgatactc aggagttaac ttataccaat caatattaga gaggatatca 
     5161 gcagcattag catcagccaa agacttttgt ccttgaagat taaaaacctc ggcattagaa 
     5221 acattagtag cattatccat ctgaatagcc gtagacaaag cattctgaat accatcaaat 
     5281 tgcatgggat tattctgaat aggaggagca gcagaagccg gagaagatga tccgatactt 
     5341 tgagcagttc caacattaga agaatccatt cctaaataag gattatagcc agcttcttga 
     5401 agacgcttac gaatattctt aggagaattc cactcattag tcttattcca catttcagtc 
     5461 tgatattgac gagccttttc tgcttctcta gcattaaact cattattcat cttattgatc 
     5521 tgcatattct tcgaattaga agaagaagta ccaaaaagat tgccaaccag tgaagcagca 
     5581 ccggaagcaa gaccagcagc aactaaagga ggaatgccaa actgaacaaa tgaattatta 
     5641 ttcagctgaa tcaggtgatc cagcagaagc actactacca acagtagaag cggcggcagc 
     5701 ggcagcaatt tcctcatcat attttttacg aatttcggca ccaacacgag tttcaagttc 
     5761 atgagctacc tggattaaac tttcagacca agcaaggatc tcagaaggag actgtaaatg 
     5821 acgagactta acagtatcca aaagaagctg atcatccatt tgatctaact gagattgaat 
     5881 agcagacgtc ttagtcctac gagattcaga aagataacgc aatccttcaa taccaatctt 
     5941 attagcagta tccttagcat gaagcaacat agaaatatcg gaacgataac ggtaatattt 
     6001 atcaggacct tcgccaatag tttcaataca aaacttagaa accggatcaa tttcaacagc 
     6061 tatttccttt tcgcgaacag cgggattaaa accaacagca gaaatagaag gatctacctt 
     6121 acggaaacca cgaccaaaac aaactttatt tgaaatttta ttttccataa taaataatat 
     6181 taataaggca taccatcctg agaaagagga cgaacaacct tacatgaaac atcacaatta 
     6241 attaaaagct gatcactttc ccaagtagaa tcagcagcaa cagcaaaaat agaatccaaa 
     6301 gtattaggat ttaccttgaa gaacggccaa gaaatagaag cttgtgaact accacctgaa 
     6361 gcaaaccacc tattcaaata aaaatcatca ataggagcaa cccaatcctt aagggtagta 
     6421 agaaatgcac catgaacacg atcaatttta gatttccacg gccaataacg agggttgtaa 
     6481 cctagaaagt caaaatcaga ttcaagatca ttgtcaaatg cattcgaatt aaacaaagtg 
     6541 atagcaggta cagcttccat tccaatatta tcaaattcag gaataggaag atcctctaca 
     6601 gaagtacaaa gaagttgaga atcctgacca ctaatagcgt aatccaaaag aggtacagc 
//
