FEATURES             Location/Qualifiers
     gene            62..295
                     /locus_tag="Alpa_01"
     CDS             62..295
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_01"
                     /translation="VLLATSASPSSSGVIVTVLPYWFCFTINFILSSFIPVVTIFMVDVGFIDPWLSTMSSGLFTTMPLMFTDSFGDVPIM"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="protein motif:Phobius:1.01"
                     /note="1 probable transmembrane helix predicted by Phobius with cleavage site between residues  and  "
                     /inference="protein motif:TMHMM:2.0"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(890..1147)
                     /locus_tag="Alpa_02"
     CDS             complement(890..1147)
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_02"
                     /translation="MEQEFNDMKDVFKVLPTTQEEKEYMIVIGKHLATTEKFPTREAAEEENQLCRLESNCGNDLCLQRSGRIRKKIKTLRKKSHKKNY"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:hypothetical.protein"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(1189..1338)
                     /locus_tag="Alpa_03"
     CDS             complement(1189..1338)
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_03"
                     /translation="MGGNYPSYQYGNHCYNYDLMCAVVYNEPIRKQKQSKLNAKDRTNNNVKR"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(1360..1536)
                     /locus_tag="Alpa_04"
     CDS             complement(1360..1536)
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_04"
                     /translation="VYFNTPIKMKKICYELDEDVITKKYSFTKQERRLICEKTFDKDEQNAKIWKQRQLKLW"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:hypothetical.protein"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(1592..1792)
                     /locus_tag="Alpa_05"
     CDS             complement(1592..1792)
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_05"
                     /translation="MAATKFTAIYVNNEKKMIEREIPGMNTYKIAEKFAKILNDPEETKLVCVIESWKLYPKEDEKTEKN"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:hypothetical.protein"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(2374..3411)
                     /locus_tag="Alpa_06"
     CDS             complement(2374..3411)
                     /product="putative replication initiation protein"
                     /protein_id="gnl|USP|Alpa_06"
                     /translation="MCLYPKLIPNKRYLPTKKNGGVPPVCPDERLRYVTAACGDCYECRKQKQRQWVVRMSEENRQTPNAYFLTLTIDDKSYKQLKQKYKLKDNNDIATKAIRLCLERVRKLTGKSVKHWFITELGHEKTERLHLHGIVWGLGNGEKITNNWKYGITFTGYFVNEKTINYITKYMLKIDEKHPKFRGKVLCSAGIGSGYLKREDAKRHVYIPGKTNESYRMKNGGKLNLPIYYRNKIFTEEEREKLFLDKIEKGIVYVLGSKIDLKTEESRYMGVLLSERERCERLYHDSPKDWDKRKYLNRLKKQRQWIESKATKVAEKERKKEERSEKRLNNDIDLFANLYFNQNYT"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:putative.VP4"
                     /inference="similar to AA sequence:INSD:WP_022044634.1"
                     /inference="similar to AA sequence:INSD:CDN73649.1"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(3414..4451)
                     /locus_tag="Alpa_07"
     CDS             complement(3414..4451)
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_07"
                     /translation="MIGAIMGIGGTLMGALNANSASNQSWQRQHQLMEIQAELNRKNAKFNTGQAKEMWNYTNFENQMKHIKEAGLSPGLIYGMGGQGGSTQGAGIANGVGLPQDQSVGMGLRAQEIGIEMANALSQIKLNESQANKNEAEANKIKGVDTEAQQATIDNLIAQTSNEKTKRGLLLGQIRVADAEEELKRNTADWTKEKAEETRWNVKNLKKGIDKLTAEIDGVELDNNLKKRTIDNKVKESTLTLQNLMTEILLKGSQQKVNEEQAKAIPTRILQGWEELTKKGKALIVQREQMETYAQDVINRYELGKKGLDIEEQKLIKDIVLGMLEIASKGAGAALGAKVGKTGFQ"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:putative.VP2"
                     /inference="similar to AA sequence:MV_prot:putative.gpH"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(4612..4929)
                     /locus_tag="Alpa_08"
     CDS             complement(4612..4929)
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_08"
                     /translation="MKYSKPTKNNGRLESVEIYEGESIETKCARVLENGEPITDTAPIIYTAKEDGVLPAYNIRTDRFDIAMDAYDKITRNSAKKEIAPKPEDFGNVPNKTDGGSPSEN"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:hypothetical.protein"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(4943..5734)
                     /locus_tag="Alpa_09"
     CDS             complement(4943..5734)
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_09"
                     /translation="VDVTDGKLSMDALNLAQKVYNFLNRIAISGGTYRDWLETVYTGGNYMERCETPMFEGGVSQEIVFQEVISNSASQEEPLGTLAGRGVTTGRQKGGHIRIKVTEPCYIMCICSITPRIDYGQGNTWDTYLETMDDWHKPALDGIGYQDSLNGERAWWTDHIASNGGSLTKTAAGKTVAWINYMTNVNRTFGNFAPEMPESFMVLNRNYSMNNNGQIEDLTTYIDPVKFNYIFADTNLDAMNFWVQTKFDIKVRRLISAKQIPNL"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:putative.VP1"
                     /inference="similar to AA sequence:INSD:WP_005867318.1"
                     /inference="similar to AA sequence:INSD:WP_022044635.1"
                     /note="1 probable transmembrane helix predicted by TMHMM"
ORIGIN
        1 gtatacgctt cttacaaacc atgttcctcc ggttggtata tttgttgttt ttatagttaa 
       61 ggtgttgctt gctacctctg catcccctag ttcttccgga gtcattgtga ctgttcttcc 
      121 gtattggttt tgttttacta ttaattttat attatcttct tttattcctg tcgtaactat 
      181 ctttatggtt gacgttgggt ttattgaccc ttggctttct acaatgtcat ctggattatt 
      241 tactactatg ccattaatgt ttactgatag ttttggagat gttccaatca tgtagaagtt 
      301 ttcttcttgt gtgtttgcgt agtaattttt aaatatatca aaatatgtta atatgggtag 
      361 cgcatttttg tttattactc ctgctccgct attgggcgta ttagcgtatc ctctgattcc 
      421 tagataagct agcaagcaac ttggatttac ttgtacccat tgtttttcct catttgaagg 
      481 agtatctgat aacgttgtta tatttacttt taattgtggt aattttactt tctccatatt 
      541 cagtccgatt tttgttcggt tgttgtgtaa ccaactgttg tacagtctta ccggtcctgt 
      601 gtacacatga tgttctagtt tgaacgagcc gaataaaggt cccgttgttg gatgtgtaag 
      661 cacatttgaa tcgatgtcaa tgtcgaatgt atctcccttt tgagctacta ggcatagatt 
      721 tggaactagt gttcctggac tttgtgtgtt tcttacgatt gttgataaat cgtgtgtcga 
      781 catgttatac tcatgcagac ttacggacat tttattatta tctcctatgg tatttttacc 
      841 aatgtttttt tgtattgcca tggtttagcc ctcctttttt ttagcgtcgt taataatttt 
      901 ttttgtgact ttttttgcgg agcgttttaa ttttttttcg tattcgtccg cttctttgca 
      961 agcataaatc attgccgcaa ttagattcca gtctacagag ttgattttct tcttctgctg 
     1021 cttcacgtgt tggaaatttt tctgttgttg ccaaatgttt tccaattacg atcatgtatt 
     1081 ctttttcttc ttgtgttgtt ggtaatactt tgaatacatc tttcatgtca ttaaattctt 
     1141 gttccatttt tttaatagtt tttaggatta atattaatat gtgtgctatc aacgcttgac 
     1201 gttgttgttt gttcggtctt ttgcgttgag ttttgattgt ttttgcttac ggataggctc 
     1261 attgtacacg actgcacaca taaggtcgta attatagcaa tgattgccgt actgatagct 
     1321 cggataattt ccacccattg attacctgtg attttcatgt taccataatt ttaattgtct 
     1381 ttgtttccaa atttttgcat tttgttcatc tttgtcaaaa gttttttcgc atattaacct 
     1441 tctttcttgt tttgtgaagc tgtatttttt tgtaataaca tcttcatcta gttcataaca 
     1501 tattttcttc atttttattg gtgtgttgaa gtacacgtag ttttttagtt cctgaaatgt 
     1561 attgaaaata tatccgtctg cctcatattt tctaattttt ttcggttttt tcatcttctt 
     1621 taggatataa tttccacgat tctattacac atactagttt ggtttcttcc ggatcattta 
     1681 gtattttagc gaatttttct gctattttat acgtgttcat acccggaatt tctctttcga 
     1741 tcattttttt ctcgttgtta acgtagattg ctgtaaattt tgttgctgcc ataatttttg 
     1801 gttttaatta tttataaatt gaagaatttt gatatattag gataatttct tttgaaataa 
     1861 tttttgtcta tccattttga ttcttgtttt ctaccatctt tactttttag tattatgagt 
     1921 attcttttac attctttgaa tctaatgtca attactgaat gattttctaa tagttttttt 
     1981 aatgttttca taattacctc cttgtttttt attacactac aaatatacgt gttttttttg 
     2041 attcctacaa attttctgat atttattttt ccgatttaac ctctattaac aatagtatct 
     2101 ttgagcctcc gtggcgtttg aacggtgata gggcaatagg gagcgcatag ctccccttag 
     2161 cgactagcac catagtatcg gcgaagccgc acaccacgac cttcggtcgg gtgcacgtca 
     2221 ctccttatcc cggtcttaag gtagctgttt ctcggataaa ggtgtacctc accctcccgt 
     2281 tatacaccta agcctcccgg cgtttgaggt gataaataca gacccgtgtg atgttaacac 
     2341 ggaaccctgt tggacgtgcc cgtacgtggt cctttacgta tagttttgat tgaaatatag 
     2401 attggcgaat agatcaatgt cgttatttaa tcgtttttca cttctttctt cttttttcct 
     2461 ttccttctcg gcgaccttag tcgctttaga ttctatccat tgtctttgct ttttgagtct 
     2521 gttgagatat tttcttttat cccaatcctt tggactatcg tgatacagtc tttcgcagcg 
     2581 ttctcgctcg cttaggagta cgcccatgta tcttgactct tccgttttta ggtctatttt 
     2641 actgcctagt acgtatacta ttcctttttc aattttgtct aggaatagtt tttcacgctc 
     2701 ttcttctgta aagattttgt ttctataata gattggtaga ttgagttttc caccgttttt 
     2761 cattcgataa gattcgtttg ttttgcctgg gatatataca tgtcttttag catcctctcg 
     2821 cttgaggtat cctgatccta ttccagcgga gcataacact tttcctctga attttggatg 
     2881 tttttcgtct atttttaaca tgtattttgt aatgtaattg attgtttttt cattcacaaa 
     2941 atatccggtg aatgtgattc cgtatttcca attgttcgtt attttctctc catttcccaa 
     3001 accccatact atcccatgca gatgcaatct ttctgttttc tcgtgtccta gttctgtaat 
     3061 aaaccagtgc tttacggatt ttccggttaa ttttcttact ctttctaagc atagtcttat 
     3121 agcttttgtt gcaatatcgt tattatcttt taatttgtat ttttgtttca gttgtttgta 
     3181 tgatttatca tcgattgtta gtgtcagaaa gtaggcgttt ggtgtttgtc tattttcttc 
     3241 tgacattctt actacccatt gtctttgttt ttgttttctg cattcataac agtctccaca 
     3301 tgctgctgtt acataacgta gtctttcgtc aggacaaaca ggcggtactc cgccattctt 
     3361 ttttgttggt aggtaccgct tatttggtat gagtttagga tatagacaca taattattga 
     3421 aaacctgttt tacctacttt tgctcctagt gccgcccctg ctccttttga agctatttcg 
     3481 agcattccaa gtacaatgtc tttgatgagc ttttgttctt caatatctag accttttttg 
     3541 cctagttcgt atctgtttat tacatcttgt gcataggtct ccatttgttc tctttgaacg 
     3601 atgagtgctt ttcctttttt ggtaagttcc tcccatcctt gtagaattcg tgtcggaatt 
     3661 gcttttgctt gctcttcgtt gactttttgt tgacttcctt taagtagtat ttcggtcatt 
     3721 agattttgaa gcgttagagt gctttctttg actttgttgt cgatcgttct ttttttgagg 
     3781 ttgttatcga gttctactcc gtcaatttcc gctgttagtt tgtcaattcc ttttttgagg 
     3841 tttttaacat tccatcgtgt ttcctcggct ttttcctttg tccaatctgc ggtatttctc 
     3901 ttgagttctt cttcggcatc tgctactctg atttgtccta atagtagtcc tcgttttgtt 
     3961 ttttcgtttg aggtttgtgc tatcaggttg tcaatggtag cttgctgtgc ttctgtatct 
     4021 acgcctttga ttttatttgc ttcggcttcg tttttgttag cttggctttc gttaagttta 
     4081 atttggctta gtgcatttgc catttctatt ccgatttcct gtgctcttag acccattcct 
     4141 acggattggt cttgaggtag tcctactccg tttgctattc ctgctccttg tgtcgaacct 
     4201 ccttgtcctc ccattccgta gattagtcct ggacttaatc ctgcttcttt tatgtgtttc 
     4261 atttgatttt caaagttggt gtaattccac atttctttcg cttgccctgt gttgaatttg 
     4321 gcgttttttc tgttcaattc agcttgtatt tccattagtt ggtgttgtct ttgccaactt 
     4381 tggttacttg cactgtttgc attgagtgcc cccattaggg ttcctcctat tcccattatt 
     4441 gctcctatca taattattta cattttcgcg ctttgatgtt caaagcgata ttcatattac 
     4501 tcgatattat attgtaggtg cgtactttcg tgtattgtcc ggtaattaaa tcggacaata 
     4561 ctccgaagtg cttgttacct acaaggcttt gaaaatacct tttcaaacag tttagttttc 
     4621 acttggcgat cctccgtctg ttttattagg tacatttccg aaatcttctg gcttaggtgc 
     4681 tatttccttt tttgccgaat ttcttgtgat tttatcatat gcgtccatcg cgatatcgaa 
     4741 tctgtctgta cggatattgt atgctggcag tactccatct tcttttgctg tatagattat 
     4801 tggcgcggtg tctgtgattg gttcaccgtt ttctagcact cttgcgcatt ttgtttcgat 
     4861 gctttcgcct tcataaattt ctacggattc tagtctcccg ttgttttttg ttggttttga 
     4921 atatttcata atgttataat ttttataagt taggaatttg ttttgcactg attagacgtc 
     4981 ttactttgat gtcaaatttt gtttgtaccc aaaagttcat agcgtctaga tttgtgtctg 
     5041 caaagatgta attgaatttt actgggtcaa tataagttgt taaatcttct atttgaccat 
     5101 tattattcat tgaataattt cggttaagta ccatgaagct ttccggcatt tctggcgcga 
     5161 agttaccaaa tgttctgttt acatttgtca tgtagtttat ccatgccaca gtttttccgg 
     5221 ctgctgtttt tgttaatgat cctccgttgg atgcgatgtg gtctgtccac cacgctcttt 
     5281 ctccatttaa tgaatcttgg tatccgattc catcaagtgc tggtttgtgc caatcatcca 
     5341 tagtttctag gtatgtatcc catgtgttgc cctgtccgta gtcgatacgt ggtgtgattg 
     5401 agcatataca cattatgtaa catggttccg ttactttgat tcggatatgt ccgccttttt 
     5461 gccttcctgt cgtaacacct cttcctgcta gtgttcctag tggttcttct tggcttgcac 
     5521 tgttgcttat tacttcttgg aatacgattt cttggcttac acctccttca aacattggtg 
     5581 tttcgcatct ctccatataa ttaccgcctg tgtatactgt ttccagccaa tctctataag 
     5641 tacctccgct tattgcaatt ctatttagga aattatatac tttttgtgct aaatttagtg 
     5701 cgtccatgga tagtttgccg tctgttacat ccactgcact tgcttcgtta attccggtta 
     5761 caccttctat ccattcggta ttgatccaat tttgatatac atcgctgttg tatgttttt 
//
