FEATURES             Location/Qualifiers
     gene            complement(1283..1588)
                     /locus_tag="Alpa_01"
     CDS             complement(1283..1588)
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_01"
                     /translation="MEKKFRSQLLAESGKKEEEIKNVNLEIEEREVSKNGIFVLIRNKNNKWVITMCGSLVNAKEFDTKEEAEEHIAKKEWEDILTAAFIFILRINEDSKNTKKE"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(1590..1760)
                     /locus_tag="Alpa_02"
     CDS             complement(1590..1760)
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_02"
                     /translation="MNEKVKKIVKWIAVIAAAIGAAAAVILEQGCTHKYSLKANGVQIDTINVETTTKIK"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="protein motif:Phobius:1.01"
                     /note="Signal peptide predicted by Phobius with cleavage site between residues 24 and 25 "
                     /inference="protein motif:TMHMM:2.0"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(1757..2119)
                     /locus_tag="Alpa_03"
     CDS             complement(1757..2119)
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_03"
                     /translation="MGSGICNQKNRKHTEEEQNYRAYRDRGGIGDRSASLIELIGTERVSRRDYGYEGTFYVTEDGETYDNEYMNTHNPIRTGVNFYEVSNWRYNEGKEMYEPVIRRIVMIKIRFVEYQLSLDL"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(2123..2890)
                     /locus_tag="Alpa_04"
     CDS             complement(2123..2890)
                     /product="putative replication initiation protein"
                     /protein_id="gnl|USP|Alpa_04"
                     /translation="MESEINGRNKILSKNIIFATLTFSEESLKKLEYDEKEPNKAPQKAISLFRKRWWKKYKTPLKHWLITEMGHDNTKRIHLHGIIWTELTEEQFEKEWGYGWIFFGYEVSEKTINYIVKYVTKRDEANPEFNGKIFTSKGIGIGYINKNSLNKHRYQDKFTEETYRAASGIKLALPTYYKQKLWTDQERESLRIIKEEQQVKYYNKTPIKVETLEQYKEYVNAVMYWQSVKKYDGKRKKGDMQRICRSDHKEGKTNS"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:putative.VP4"
                     /inference="similar to AA sequence:INSD:WP_022044634.1"
                     /inference="similar to AA sequence:INSD:CDN73649.1"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(3073..4158)
                     /locus_tag="Alpa_05"
     CDS             complement(3073..4158)
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_05"
                     /translation="MQQQKEMMENAAQINYKYGEMAAENAFERQQVLYNRTYQDQSYANQVAQMDAAGLSPGLMYGKGGAGGGGAGSTTGAPMGATGATGAGAAADPNLQLQALMSLRQVRMSERKNEAEINLLNTQAEALKAEAGKNKEETTSIIEKRIWEVKQEMFKGWKGFIDTANQLWDQMVRWQPTEKTTIDGKEIEIPKYFEIEDDKFGKIVFGEESFQGDMMKAEKQILQGTAAIKTLESIYADEKLSAEIRKINADACSAMAQAAYFYAAGKTQEAEAKVAEARRRTEEATADLRELQYWTEIANTILKLAQVVGNMVIGGKTGKAIREYTEKKMNNTPPKNSSTVTQHYDPEMNFKGVDKTVTTKW"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(4437..4760)
                     /locus_tag="Alpa_06"
     CDS             complement(4437..4760)
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_06"
                     /translation="MKTATNRNGCINDPNLTYQAEPREVKLRKIISGESSSMEDGVFPTIYTEKKDGVLPEYDIRTDRFEVAIDAMDKINQSAANQIAKNKGETESVKNFGTEVKTDPEKS"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:hypothetical.protein"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(4765..5286)
                     /locus_tag="Alpa_07"
     CDS             complement(4765..5286)
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_07"
                     /translation="MYKSGRGLKIKCTEPCMIMALGSITPRIDYSQGNKWWTRLQNMDDFHKPTLDAIGFQELIAEEAAAWSTEATGNHELVYQSLGKQPSWIEYTTDVNETYGDFAAGMPLAFMCLNRVYEENSDHTIANASTYIDPTIYNKIFAESRLSSQNFWVQVAFDVTARRVMSAKQIPNL"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:putative.VP1"
                     /inference="similar to AA sequence:INSD:WP_005867318.1"
                     /inference="similar to AA sequence:INSD:KDS63784.1"
                     /note="1 probable transmembrane helix predicted by TMHMM"
ORIGIN
        1 gttttccatc gctcacatcc actgctgtga tcgcgttgat ccccccggtt gttccgtcga 
       61 tccattcggt attcagccag ttgttgaatc tgtcgctgag gtatgttttt accgccaacc 
      121 ctgcttgtga aaaccatgaa tttgcactga catatgttct cgtacggtta tagtttggta 
      181 gtgttaagcc tcctgttgca gctccgtatg gcattctgat gtttggtact gtatatgccg 
      241 cggtactggg tgcagctaag attgcagttc gttcttcgtc gatgtttttt aacggaaacg 
      301 ctgttaattt gatcttcttg ttgtctggca ttgttatcga attctctccg gtcgaatccg 
      361 cgttgtaggc gatctggatg gattttagga ctctgtacgc gtagatcttg gttgcctttc 
      421 ttgggtttct tggctccctt agtcctaatg catccgggtc tgttcgttcg aatacgaagg 
      481 agtctcctag ttttgtcagc tcgtttactt tctgcgttga gccgggaata ttcgtcaaga 
      541 actggatttc attgacctct tcgggtgaga cgttctcctc gaactccagc ttaatgtact 
      601 ttggactgtc agttgtcgga ctgatactgt atgctgtact tttgttgtcc gtccatgtct 
      661 tgagccagtt aaccccggtt cctacgctga tgctcttcca gatatggttt actccggtga 
      721 ctacgtatgc gttttcttcc tgcttgttgg cgtagtagtt tttgaatata tcccagtatg 
      781 ccagattgaa tattgcagga aatcttcgga cgtattgatt gacgctggaa tatccgaatc 
      841 cttttattcc caagtatgag agcagcgagc tcggattgac ttgccctcta ttggtatcgt 
      901 ttttatagat tgatgtgttg gcggtgttga ctaagaattg cggcagcagc accttgctca 
      961 tgttcagtcc tactcccagg gcattattgt gcagcgctgc tacgtagagc ctgatcggaa 
     1021 ttacaaacac atcgatctgg tgcttgaagc ttccgaatac aggtccggtt gttggcagcg 
     1081 tcttcacttt cgttgtgatg tcgatgtaga acgttgtgcc gtccaaacct atctgacacc 
     1141 aatagggaac gattgtgccg catgcctgtg atgttcggat tatctttcct acgttgtgag 
     1201 acgatctgcc gaaattaggc agatatactt ccattttgct ttcgcttcga attctgtctc 
     1261 ctcctagtgt ttttttcatg gtttattctt ttttagtgtt tttcgaatct tcgtttatgc 
     1321 gcaggatgaa tatgaatgct gcggtcagga tgtcctccca ctcttttttg gcgatgtgtt 
     1381 cttcagcctc ctctttggtg tcgaattcct ttgcatttac gagcgagccg cacattgtga 
     1441 tcacccattt gttgtttttg ttgcgaatca gtacgaatat gccgtttttc gatacttctc 
     1501 tctcttcgat ctcgaggttt acatttttga tttcttcctc tttttttccg ctttcagcaa 
     1561 gcagctgact tctgaatttc ttttccatgt tacttaattt ttgttgttgt ttctacattg 
     1621 attgtgtcga tttggacacc gtttgcctta aggctgtact tgtgagtgca cccttgttct 
     1681 aggatcacgg cggctgccgc gccgatcgca gctgctatta ctgcgatcca ctttacgatt 
     1741 ttctttactt tttcattcat aggtctagtg atagttgata ttcgacaaat ctgattttga 
     1801 tcattactat tcttctaatg acaggttcgt acatttcttt tccttcgttg tatctccagt 
     1861 tgctcacctc atagaaatta acgccggttc ttattggatt gtgagtgttc atatattcat 
     1921 tgtcatatgt ttctccatct tctgttacgt agaacgttcc ttcgtatccg tagtctcgcc 
     1981 gggatactct ttctgttccg atcaattcta tgagactggc agatctgtct ccgatgcctc 
     2041 ctctgtctct gtaggctcta taattctgtt cctcttcagt atgctttcta tttttctggt 
     2101 tgcaaattcc acttcccata tttcacgaat tagtttttcc ttctttatga tcagatctgc 
     2161 atatcctctg catatctcct ttttttctct ttccgtcata ctttttaact gattgccaat 
     2221 acattactgc gtttacatac tctttgtact gctccaatgt ttctactttg ataggagtct 
     2281 tgttataata ctttacctgc tgctcttcct ttatgatccg gaggctctct cgttcttggt 
     2341 ctgtccatag cttctgtttg tagtatgtcg gcagcgctag ttttattcct gaggctgccc 
     2401 tgtatgtttc ctctgtgaat ttgtcttggt atctgtgctt gttgagcgag ttcttgttta 
     2461 tatagcctat tccaatccct tttgaagtaa atatcttccc gttgaactca ggattagctt 
     2521 cgtctctctt tgtcacgtac tttacgatgt agtttattgt tttctcgctt acttcatacc 
     2581 cgaagaatat ccagccgtat ccccattcct tttcgaactg ctcctccgtc agttctgtcc 
     2641 atatgatgcc gtgcaggtgt attcttttgg tgttgtcatg ccccatttct gtgattagcc 
     2701 agtgtttgag cggtgtttta tactttttcc accatcgctt tctgaatagg ctgattgctt 
     2761 tctgaggtgc tttattcggt tctttttcat catattctag tttttttagg ctttcctcgg 
     2821 agaatgtcag cgttgcaaat ataatgtttt tggataagat tttatttctt ccattaatct 
     2881 cactctccat tcatttgcct ttgcgcgcct gcattcttcg cagtgtccgc atggaatttg 
     2941 aatccatctt agacgacggt cccttgctct tttgccgttt ttattcgatt tggcatactt 
     3001 tgggttttct atgatacttg gatataggca cacggctttt aattgaaatt ttccccctaa 
     3061 aaatcgtttt ttctaccatt ttgttgttac agttttgtcc actcccttga aattcatttc 
     3121 tggatcatag tgctgcgtta ctgttgatga gttcttgggg ggagtattgt tcatcttctt 
     3181 ttctgtgtat tctctgatcg cttttcctgt ttttcctccg attaccatat ttcccactac 
     3241 ttgcgccagc ttgaggattg tgtttgctat ttcggtccag tattggagtt ctcgcaaatc 
     3301 tgcggttgct tcttcggttc ttcttcttgc ttcggccact tttgcttctg cttcttgagt 
     3361 tttgcccgct gcgtagaaat atgcggcctg cgccattgcg ctgcatgcgt ccgcgtttat 
     3421 ttttctgatt tctgccgata gtttttcgtc tgcgtatatg ctctccagag ttttaattgc 
     3481 tgctgttccc tggaggattt gtttttcggc tttcatcata tcgccctgga atgattcttc 
     3541 tccgaatacg attttaccga atttgtcatc ctctatttcg aagtatttag gtatttcgat 
     3601 ttctttgccg tcgattgttg tcttttctgt gggctgccat cttaccatct gatcccatag 
     3661 ctggtttgct gtgtcaatga agcctttcca tcctttaaac atttcttgct ttacttccca 
     3721 tatccttttt tcgattattg atgtggtttc ttctttgttt ttgcccgctt ctgccttgag 
     3781 tgcctctgcc tgcgtattga gtaggttgat ttctgcttcg ttctttcgct cgctcatccg 
     3841 cacctgccgt agtgacatta gtgcctgcag ctgcaaatta ggatcggcgg ctgcacctgc 
     3901 accggtagca cccgttgctc ccatgggagc gcccgtcgtc gatcctgccc ctccgccgcc 
     3961 ggccccgcct ttaccgtaca tcaggccggg agataatccc gctgcatcca tctgtgcgac 
     4021 ttggttggcg tagctttggt cttggtaggt tctgttgtat aacacctgct gcctttcgaa 
     4081 cgcattctcc gccgccattt ctccgtattt atagtttatt tgagctgcgt tctccatcat 
     4141 ttctttctgc tgctgcatct gtcttttcct gcctaggccc agcatattga gaattcctga 
     4201 tgcgccgcca atgatccctg agatagggtt catcatatcg cctcctttct cgagtaattt 
     4261 cagtagcttc ttgaagtcca ttttcgttct tttcttaaaa gaatttatac cttatgttct 
     4321 tgttatatat gtataaacgt ctaccgcgct gtaccacatg catttgcaag ggctaaaaga 
     4381 gggggggcgg aagcatcccc cctctttggt ttttggtaga gctttatacg actgctttag 
     4441 ctcttttcgg gatcggtttt cacctctgtc ccgaagtttt tcacactttc agtttcaccc 
     4501 ttgttcttcg cgatctggtt cgctgcgctc tggttgattt tgtccatcgc gtctattgct 
     4561 acctcaaatc ggtccgttct tatgtcatac tcaggcagca ccccgtcttt cttctctgtg 
     4621 tagatcgtcg ggaacactcc gtcctccatg ctgctggatt ctccgctgat tatctttctc 
     4681 agcttcactt ctcttggttc tgcttggtat gtgaggttcg gatcgttgat gcatccgttt 
     4741 ctgtttgttg ctgttttcat ggcgttataa atttggaatt tgttttgctg acattacccg 
     4801 gcgtgctgtt acgtcgaatg ctacctgtac ccagaagttt tgtgagctca atctcgactc 
     4861 tgcgaatatt ttgttgtata tcgtagggtc aatatacgtt gaagcattgg cgattgtgtg 
     4921 atccgagttt tcttcgtaca ctctgtttaa gcacatgaat gctaacggca ttcctgcggc 
     4981 aaaatcgccg tatgtttcgt ttacgtctgt tgtgtattcg atccatgatg gctgttttcc 
     5041 taatgactgg tatacgagtt catggtttcc ggtggcttct gtactccacg ctgctgcttc 
     5101 ttctgcgatc agttcttgga acccgattgc gtctaatgtc ggcttgtgga agtcatccat 
     5161 gttctgcagt cttgtccacc acttattgcc ctgactgtag tcaattcgag gtgtgattga 
     5221 tcccagtgcc atgatcatgc agggttctgt gcatttgatt ttcaagcctc ttccggattt 
     5281 gtacatagtt gcaacccctc g 
//
