FEATURES             Location/Qualifiers
     gene            29..916
                     /locus_tag="Alpa_01"
     CDS             29..916
                     /product="unnamed protein product"
                     /protein_id="gnl|USP|Alpa_01"
                     /translation="MASWAGALQGIAGQNTSSSAKQAEELRTWQEQQAELARKYNSQEAQKNRDWQERMSSTAHQREVRDLIAAGLNPVLSVTGGSGAAVTSGATASSSAPSGAMGSVDNSATGAVAGLFGSLLSSFLSLEGTRVSAQSNQAIADKYTAMSKYTSELQAQTQLTSTNIQAMAQKYTADAHLAGTKYAADQSAAAQKVSASIHAAAQKYGYNVQSMTQRDIAAFNAQVNKDLQKAGFKQEFDIKKAFPNNAWNVFGGLGTQAVEDIQNANLPWGKNIFDFFANVLPGAISGKDASKRKKR"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:putative.VP2"
                     /inference="similar to AA sequence:INSD:CDL65860.1"
                     /inference="similar to AA sequence:INSD:CDL66940.1"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            933..2099
                     /locus_tag="Alpa_02"
     CDS             933..2099
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_02"
                     /translation="LEGRGNQYYLDILVPTDTTRPTEYGEGDFIACFHPLKGFRIGTTKNGKADMKIVPYGVHHLELRKGRICTSDVPEISAYSEKAWLDWVEIPCGKCEGCRIARSREWANRCMMELEYHDSAYFLTLTYDEEHVPRHWYADPETGEAMQSLSLCKRDLQLFWKRLRKAFPDDHIRYFACGEYGSTTFRPHYHAIVFGLHLHDLMPVQDIRRGDVGYQYFYSEALQKAWSVVEQKGEYDTPCTRKPIGYVLVGQVNWETCAYVARYVLKKASGPEADVYQTFNIDPEYVDMSRRPGIGRQWYDDHPECMEYDTISISTPDGGRKIRPPKYFDKLFDLEQPELMAAIKEKRKHFAEEGKKAKLAQSTMTYEEILETQERVLHNRIKNLRREL"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:putative.VP4"
                     /inference="similar to AA sequence:INSD:WP_024251053.1"
                     /inference="similar to AA sequence:INSD:CDL66943.1"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            2385..2582
                     /locus_tag="Alpa_03"
     CDS             2385..2582
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_03"
                     /translation="MDFSQTMEIIDQVYQDMFVETVLKFEVLEKSVDVGSAGRMAHQERLDGMRKLYTKLIKELYQYDA"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            2597..3349
                     /locus_tag="Alpa_04"
     CDS             2597..3349
                     /product="unnamed protein product"
                     /protein_id="gnl|USP|Alpa_04"
                     /translation="VTCVLVFSASPPNRMTISPPAISPTLSWNPMVCFLLTLPIFSFSASVSSIPIRVFSFRRSFMSSFPTARRFSALCRRRMPMFETWHREQQHFCSEPGCGEKILYSPEFDRFGVMTLKESGKEDLYAFIQSHKDSVDLHKIMDRFNAGDASALQKVQGMFGDFSEMPQTYAGLLNHMIEAEQTFMSLPLETREKFGQSFHAWLAQAGSVSWLEAMGMVTPPTSQNSAGEPPAAPQSPEGGETDPAPASPAG"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="protein motif:Phobius:1.01"
                     /note="1 probable transmembrane helix predicted by Phobius with cleavage site between residues  and  "
                     /inference="similar to AA sequence:MV_prot:putative.VP3"
                     /inference="similar to AA sequence:INSD:CDL66946.1"
                     /inference="similar to AA sequence:INSD:CDL65858.1"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            4176..5180
                     /locus_tag="Alpa_06"
     CDS             4176..5180
                     /product="unnamed protein product"
                     /protein_id="gnl|USP|Alpa_06"
                     /translation="VTLADRVDHSQFKAPMSAWISGPQPNKDYSSVIQTWNFGSNLGGTDVESVATGVGFDAPTSRDGSMYLDNLWAIQSGNVTAATINQLRMAFQIQKLYEKDARGGTRYIEILKSHFGVTSPDARLQRPEYLGGNRIPVNINQVVQSSATQSSGTPLGDTAAFSVTTDVHGDFIKSFVEHGFVIGIMVARYDHTYQQGLERFWSRRDRLDYYFPVFANIGEQPILNKEIYAQGTVQDNEVFGYQEAWADYRYKPSRVAGEMRSKAPTSLDVWHLADEYTQLPKLSDAWIREDKTNVDRVLAVTSAVSNQMFADLYIQCKATRPMPMYSIPGLIDHH"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:putative.VP1"
                     /inference="similar to AA sequence:INSD:CDL65928.1"
                     /inference="similar to AA sequence:INSD:CDL65904.1"
                     /db_xref="InterPro:IPR016184"
                     /db_xref="InterPro:IPR003514"
                     /GO_component="GO:0019028 - viral capsid"
                     /GO_function="GO:0005198 - structural molecule activity"
                     /db_xref="eggNOG:bacteNOG05989"
                     /db_xref="eggNOG:bactNOG180503"
                     /db_xref="eggNOG:bctoNOG21249"
                     /db_xref="eggNOG:NOG133500"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(3471..4202)
                     /locus_tag="Alpa_05"
     CDS             complement(3471..4202)
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_05"
                     /translation="MVNAIGQSHNGEITTLSNRNSHVRALLGSRQRRSEVVVELGGLEGHTAFDNIGDIVGAVRTCKGSIIHGDVEGVGEVFITEPLIHDEGVGTEGESVNGEVGNTSRDAHVVGNGANRPATRGRSHLGHGILHGRNPGGLSVLTHELTPMLPYDTVGHEVKIGVQVEIIHHRGEQSLQAGNHGCLHLESITGKNFIHIEGDNVSDIETEFNTMVTPKSATSNIKVSRIKSKSCIFITRQVNTSSQ"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /note="1 probable transmembrane helix predicted by TMHMM"
ORIGIN
        1 ataccctact atgtccagtg gccagaagat ggctagctgg gcaggtgccc tccagggcat 
       61 tgccggtcag aatacaagct cctccgctaa gcaggcggag gagctgagaa cttggcagga 
      121 gcagcaggct gagcttgcaa gaaaatacaa ttctcaagag gcccaaaaaa atagagattg 
      181 gcaggagcgt atgagctcta ctgcccatca acgagaggtg cgtgatttaa ttgctgctgg 
      241 ccttaatccg gttctttctg tcactggtgg tagcggtgcc gctgttactt ctggcgcaac 
      301 ggctagctcc tctgccccgt ccggtgctat gggcagtgtg gataatagtg ccactggtgc 
      361 tgttgctggc ttgtttggga gcttgcttag ttctttttta agtcttgagg gtacccgtgt 
      421 ttctgctcag tctaatcagg ctatcgcgga taaatatacg gctatgtcca aatatacttc 
      481 cgaactccag gcacaaactc agcttacttc taccaatatt caagctatgg ctcagaagta 
      541 tactgcggat gctcatttgg ctggtacaaa gtacgccgca gaccagtccg ccgccgctca 
      601 gaaggtttct gcttctatcc atgctgctgc gcaaaagtat ggttataacg tgcagtctat 
      661 gacgcaaagg gatattgctg ctttcaatgc tcaagtgaat aaagatttac agaaagctgg 
      721 cttcaaacag gagtttgata tcaaaaaagc tttcccgaat aacgcttgga atgtttttgg 
      781 tggtcttggc actcaggctg ttgaggatat tcaaaatgct aatttaccct ggggtaagaa 
      841 catctttgat ttttttgcca acgtgctgcc cggtgctatt tctggcaagg atgcttcaaa 
      901 gcgcaaaaag cgctgacgac tgaggctgaa aattggaggg tcgtgggaac cagtactatc 
      961 ttgatatact ggttcccact gacaccacca gaccaaccga gtacggagag ggtgatttta 
     1021 tagcctgttt tcatcccttg aagggattta gaatcggcac cacgaagaac ggcaaagcag 
     1081 atatgaaaat agttccctat ggtgttcatc acttggagtt gcgcaaaggt cgaatttgta 
     1141 cttccgatgt tcccgagatt tctgcttatt cggaaaaggc ttggctcgat tgggttgaaa 
     1201 tcccctgcgg caagtgtgaa ggttgccgga ttgcccgctc tcgtgaatgg gccaaccgtt 
     1261 gtatgatgga acttgagtat cacgactcgg cttatttcct gactctgact tatgatgagg 
     1321 agcatgtccc ccgccattgg tatgctgatc cggagaccgg agaggcgatg cagtcccttt 
     1381 cattgtgtaa aagagattta cagttgttct ggaagcgtct tcgcaaagct ttccccgatg 
     1441 accacattcg ctatttcgct tgtggtgagt atggctctac caccttccgg ccccattatc 
     1501 atgcaatagt ttttggactc cacttgcatg acttgatgcc cgtgcaagat atccgacgtg 
     1561 gtgatgtcgg atatcagtat ttttactcgg aggctttaca aaaagcctgg tctgtggtag 
     1621 aacagaaagg ggagtatgac accccttgca cccggaagcc tatcggctat gtcttggttg 
     1681 gtcaagttaa ttgggagaca tgcgcttatg tcgcccggta cgtcctcaag aaagcctctg 
     1741 gccctgaggc cgatgtctac cagacgttta acatcgaccc agagtatgtc gacatgtccc 
     1801 gccgccctgg tattggccgc cagtggtatg acgatcatcc cgaatgtatg gagtatgaca 
     1861 ctatctccat ttccactcca gatggtggtc gcaagattcg tccccccaag tatttcgata 
     1921 agctttttga cttggaacaa ccggagctta tggctgccat caaggagaag cgcaagcact 
     1981 ttgctgaaga gggcaagaag gccaagctgg cccagtccac catgacctac gaagaaatcc 
     2041 ttgagaccca ggagcgcgtg ctccataacc gtataaaaaa tttgagaagg gagttgtaat 
     2101 catggctcga aggatgaggc gttcccagga caggcaggta tttcgccata ccgccgtgaa 
     2161 cagtaagcgt atcaacgtga accccaaaat ctaccgtgga ggtatcagga tgtgaatgac 
     2221 gaacgtgcta ccgtctgtgt ccggctgaat ctcgatgccg actgttacga gctggccgcc 
     2281 aaagtttggc gttctctcga tatggagctt gatttttatg agttcctcgc cctggaactg 
     2341 caaatccggc tcattgagct atctggtttt ttggagtcag agtaatggat ttttctcaaa 
     2401 cgatggaaat tattgaccaa gtgtatcagg atatgttcgt cgagactgtg ctcaagttcg 
     2461 aggttcttga gaaaagtgtt gatgtcggct ccgctggccg tatggcccat caggagcgcc 
     2521 tcgacggcat gcgcaagctt tacactaaac tgattaagga gttgtatcaa tatgatgctt 
     2581 aacgtttacg ctatccgtga cctgcgttct ggttttttcg gcctcaccac cgaacagaat 
     2641 gactatatcg ccgcccgcaa tttcgccaac gctatcatgg aatcccatgg tgtgcttttt 
     2701 actcacgctt ccgattttca gcttttccgc atcggtgagt tcgattccga taagggtgtt 
     2761 ctcattccgg cgcagcttca tgagctcgtt tccgacggcg cggaggttct ccgctctatg 
     2821 cagaaggagg atgccaatgt ttgagacttg gcatcgtgaa cagcagcatt tttgctctga 
     2881 gcccggttgc ggcgagaaga ttctttattc tccggagttt gaccgcttcg gtgttatgac 
     2941 cctcaaggag agtggtaaag aagacctcta cgccttcatt cagtcccaca aggattccgt 
     3001 cgaccttcac aaaatcatgg acaggtttaa cgctggtgat gcgagcgcct tgcagaaggt 
     3061 gcaaggcatg tttggtgatt tctccgaaat gccccagacc tatgccgggc tgctcaatca 
     3121 catgatagag gccgagcaga cgtttatgag cttacccctc gaaacccgtg agaagttcgg 
     3181 tcagtcattc cacgcttggc tcgctcaggc aggctctgtg agctggttgg aggctatggg 
     3241 tatggttaca ccacccacct cccaaaattc cgctggtgag ccgccagcgg ccccacagag 
     3301 ccctgaagga ggtgagacag accccgcgcc agcctcaccc gctggttaaa tttcatattc 
     3361 ctgacattgg cttgagccgt tgaggttctg gtcaaggcat acacggccgc cctggccgtg 
     3421 tgaacaacag agagcgaggg gccccatggg cccctccttt tgaacaaccg ttactgactg 
     3481 gaggtattaa cttgtctcgt aatgaaaata caagatttgc tcttaatcct actaaccttg 
     3541 atattgctcg tagcactttt cggcgtgacc atagtgttaa actcagtttc aatgtcggag 
     3601 acgttatccc cttctatgtg gatgaagttc ttcccggtga tactttccaa gtgaagacat 
     3661 ccatggttgc ccgcctgcaa actctgctca cccctatgat ggataatctc tacttggaca 
     3721 cctattttta cttcgtgccc aaccgtatcg tatggcagca ttggcgtgag ctcatgggtg 
     3781 agaacactca gtccgcctgg attccttccg tggagtattc cgtgccccag gtgactgcgc 
     3841 cctctggtgg ctggtctatt ggctccattg ccgactacat gggcatccct actggtgttg 
     3901 ccaacctctc cgttaacgct ctccccttcc gtgcctacgc cctcatcatg aatgagtggt 
     3961 tccgtgatga aaacctctcc gaccccctca acatccccgt ggatgatgct acccttgcag 
     4021 gttctaacgg ctccaactat atcaccgatg ttgtcaaagg cggtatgccc ttcaaggccg 
     4081 ccaagttcca cgactacttc acttctgcgc tgcctgctcc ccagaagggc cctgacgtga 
     4141 ctattcctgt tgctcaaggt ggtaatctcc ccgttgtgac tctggccgat cgcgttgacc 
     4201 attctcaatt taaggctcct atgtctgctt ggatttctgg tccgcagcct aataaggatt 
     4261 attcttccgt tatccagacc tggaattttg gtagtaatct tggcggcact gatgttgaat 
     4321 ctgtggctac gggtgttggt tttgatgctc cgacctctcg tgatggctct atgtatttgg 
     4381 ataacctttg ggcaatccag tctggtaacg taaccgctgc cactattaac cagctccgca 
     4441 tggctttcca gattcagaag ctttacgaga aggatgcaag aggtggcact cgttacattg 
     4501 aaattctcaa gtctcatttt ggcgttactt ctcccgatgc tcgtctccag cgtcctgagt 
     4561 atcttggtgg caaccgtatt cctgttaata tcaaccaggt tgtccaatcc tcggctactc 
     4621 aatcttctgg cactcctctc ggcgatactg ccgctttttc tgttactact gacgttcatg 
     4681 gtgactttat caagtctttc gttgagcacg gctttgtgat cggtatcatg gttgcccgct 
     4741 atgaccatac ctatcagcag ggccttgagc gtttttggtc tcgtcgtgac cgcctggatt 
     4801 actattttcc cgtctttgcc aacattggcg agcagcctat cttgaacaag gagatttacg 
     4861 cccagggtac cgtccaggac aatgaggttt ttggttatca ggaagcctgg gctgactacc 
     4921 gttacaagcc ttcccgcgtt gctggtgaaa tgcgttccaa ggctccgacc tcccttgatg 
     4981 tttggcatct tgccgacgag tatacccagc tccccaagtt gtctgatgcg tggattcgtg 
     5041 aggataagac caatgttgac cgcgtacttg ctgttacttc tgctgtgtct aaccaaatgt 
     5101 ttgccgactt gtacatccag tgtaaggcta ctcggcctat gcctatgtat agtatccctg 
     5161 gccttattga ccatcactaa tcggaggtga tataatggct attaattcgg gccgttccat 
     5221 ccagcctgtc accaatcctg tcctccaggt tgttggtaat cctcg 
//
