FEATURES             Location/Qualifiers
     gene            complement(79..432)
                     /locus_tag="Alpa_01"
     CDS             complement(79..432)
                     /product="unnamed protein product"
                     /protein_id="gnl|USP|Alpa_01"
                     /translation="VESHFAQLPAAEIQRSTFDRSHGYKTSFCAGDIIPFMVDEVLPGDSFNISTSKVVRSQTMLTPIMDNMFLDTYYFFVPNRLVWKHWREFCGENREGAWAPTVEYTVPSIAPPPWRFC"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:putative.VP1"
                     /inference="similar to AA sequence:INSD:CDL65904.1"
                     /inference="similar to AA sequence:INSD:CDL65928.1"
                     /db_xref="InterPro:IPR016184"
                     /db_xref="InterPro:IPR003514"
                     /GO_component="GO:0019028 - viral capsid"
                     /GO_function="GO:0005198 - structural molecule activity"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(566..1057)
                     /locus_tag="Alpa_02"
     CDS             complement(566..1057)
                     /product="unnamed protein product"
                     /protein_id="gnl|USP|Alpa_02"
                     /translation="LRNKEARIPNISSIYTASGSPIHRILEPRFDGVNTCLVVTGEENIQDRMEAEAPSTDINYMLHRLSLGDTSVLSSKRPMYGDFTGLPSDPIEALNLVHQSEYAFAQLSADDKAKYNNDWRRWFADLLSGRDNLSEKLSSVVPNSDVEKEGADSVVEKDSGGSN"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:putative.VP3"
                     /inference="similar to AA sequence:INSD:CDL65903.1"
                     /inference="similar to AA sequence:INSD:CDL65858.1"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(1047..1325)
                     /locus_tag="Alpa_03"
     CDS             complement(1047..1325)
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_03"
                     /translation="MQNMYVIRDEVSYETGDLFCLANDAVLSRSMVSVVDSVEDADVLSRMRDSVVYQVATVSSDVDGFPIVEALPRPRLALRVSALMNVGDSVEE"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(1539..2654)
                     /locus_tag="Alpa_04"
     CDS             complement(1539..2654)
                     /product="unnamed protein product"
                     /protein_id="gnl|USP|Alpa_04"
                     /translation="MGCRLDRSRVWADRMLLELKDNDYKALFVTLTYNDRSLPSAWHVGSNYFDGFYEDVVPLVLDDDEEWIAAAAGAPATLSIRDTQLFMKRLRKTFRDRRLRFFLAGEYGPKTHRPHYHAIIYGLTLSDFKDCRIKDFNKLGQPRYISKSFERIWGNGYCVLAPVNWNTCAYVSRYTMKKVYKSENSHAYASGQLPPFCTMSRRPGIGLLHADDLLKKGDKTFIRDIDLNGKECTREVYLGRAFIRSAAREHMKPVFAAADLVESVQTCINELEAESCTEHEDVLDALYICLRAFRHRLDDVIELHIPPSVRLCSRQNERAYNSIQRSISNLAVFGGYLLEYYQGKELHFLQRIKLLPERGDLFEQTSTCKPG"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:putative.VP4"
                     /inference="similar to AA sequence:INSD:CDL66943.1"
                     /inference="similar to AA sequence:INSD:CDL65906.1"
                     /db_xref="eggNOG:bacteNOG07343"
                     /db_xref="eggNOG:bactNOG166725"
                     /db_xref="eggNOG:bctoNOG24068"
                     /db_xref="eggNOG:NOG117857"
                     /note="1 probable transmembrane helix predicted by TMHMM"
ORIGIN
        1 gagcagacgg cgcaagagga tctgttagct ttccattcaa caccgatagg aagacccata 
       61 tagtcggcaa tggtgccttt agcaaaaccg ccaggggggc ggcgcaatag aaggaacagt 
      121 gtattccaca gtaggcgccc aagcgccttc tctgttttca ccacaaaatt cgcgccaatg 
      181 cttccaaacc aaacgatttg gaacgaaaaa ataataagtg tctaagaaca tgttatccat 
      241 aataggagta agcattgtct gagaacgaac cacttttgaa gtggaaatgt tgaaactatc 
      301 accgggaagc acttcatcaa ccataaaagg aatgatatca ccggcacaga aagaagtctt 
      361 ataaccatgg gagcgatcaa atgttgaacg ctgaatttca gcagcaggaa gctgtgcaaa 
      421 atgcgactcc acgttgcgat tcaagaatta cacctccaaa agaatattga tagaaacaac 
      481 agcagcaatc aaggcaagag caccgagaac gccaataatg gaacaaacca cacgaggatg 
      541 agcgatcaca aactcagaca agaagctaat tagagcctcc agagtctttt tcaacaacag 
      601 aatcagctcc ttccttttca acgtcagaat taggtacaac agaagacaac ttttcagata 
      661 aattgtcacg gccagacagc agatcagcga accagcggcg ccaatcgttg ttgtattttg 
      721 ctttatcatc agcagatagc tgagcaaatg catattcact ctgatgaaca agattcagcg 
      781 cttctatagg gtcagaaggg aggccggtaa agtcgccata cataggacgt ttcgaagaca 
      841 gaaccgacgt atcaccaaga gagagccgat gaagcatata attaatatca gtggatggtg 
      901 cctctgcttc catacgatct tgaatatttt cttcaccagt gacaacaaga cacgtattaa 
      961 cgccatcaaa ccgaggttca agaattctat gaatcggaga accagacgcg gtgtaaatag 
     1021 aagaaatatt aggaatgcgc gcttctttat tcctcaacag aatcacctac gttcataaga 
     1081 gcactcacac gaagagcgag gcgagggcga ggcaaagctt cgacaatagg aaatccatca 
     1141 acatcagaag aaacggtcgc aacctgataa acaacggaat cacgcatgcg agaaagaaca 
     1201 tctgcatcct ccacggaatc aacaacagaa accatacttc gagagagaac agcatcgttt 
     1261 gcaagacaaa atagatcacc agtctcatat gaaacctcgt cacgaattac atacatattt 
     1321 tgcatttaaa tatcctcctc agaatcaaga tcaacgacaa aggtcatttc aaaatagtcg 
     1381 tcaaacagaa catcttccga ctcaaaaaga acaaaatcat catcatcatc aacaaaacta 
     1441 acaaaaagtt tcaaagcctt atgcctcctc tgaaattttt aacaccaaga ttaatagatt 
     1501 tcaccttggc agctgtccgg gtaaagattt ttttatcctt agccgggttt gcaggtcgac 
     1561 gtttgctcaa aaagatcacc tctttctggc agtaacttaa tacgttgtag aaaatgtagc 
     1621 tcctttcctt ggtaatattc cagcaaatag cctccaaaaa ctgccaaatt tgaaatgcta 
     1681 cgctgaatgc tattatatgc acgctcattt tgacgcgaac ataaacgaac agaaggagga 
     1741 atgtgaagct ctataacgtc atcaagacga tgacgaaaag cacgaaggca aatatacaaa 
     1801 gcatcaagta catcttcatg ttctgtgcaa gactcagctt ccaactcatt aatgcaagtc 
     1861 tgaacagatt caacaagatc agcagcagcg aaaacaggct tcatgtgttc acgagcagca 
     1921 gaacgaatga aagcacgacc taaataaact tcacgagtac attctttacc gttaaggtca 
     1981 atatcacgaa taaacgtttt atcacctttt ttaagaagat catcagcgtg aagaagacca 
     2041 atgccaggac ggcgggacat agtacaaaat ggggggagct gaccggaagc atacgcatga 
     2101 gaattttcac ttttataaac ctttttcatg gtatacctag aaacataagc gcatgtattc 
     2161 cagttcacag gagcaagaac acaatagcca tttccccaaa tcctttcaaa ggatttggaa 
     2221 atataacgag gctggccaag cttattaaaa tcctttatgc ggcagtcctt aaaatcagaa 
     2281 agagttaaac cgtagataat agcatgataa tgtggtctat gcgtcttcgg gccatattca 
     2341 cctgcaagaa agaaccgcaa gcgacgatca cggaaagttt tacggagacg cttcataaag 
     2401 agttgagtat cacggataga caaagtagca ggagcgccag cagcggctgc aatccattcc 
     2461 tcatcatcat caagtacaag aggaacaaca tcttcataaa aaccatcgaa gtagttagag 
     2521 ccaacatgcc aagcagaagg caaagaacga tcattgtatg tcagggtgac aaagagagct 
     2581 ttatagtcat tgtccttcag ttcaagaagc attctatcag cccaaacacg ggaacggtca 
     2641 agacgacagc ccatgcaacg accacaaggc acaagaagta tgaaaagaaa cgggattagt 
     2701 cataaaacaa aatac 
//
