FEATURES             Location/Qualifiers
     gene            212..1156
                     /locus_tag="Alpa_01"
     CDS             212..1156
                     /product="replication initiator"
                     /protein_id="gnl|USP|Alpa_01"
                     /translation="MRIVMKTCTFYRFSRFDEKHRRIHYLINIRRLTPSKREITLFTGESMCLMPVKLAKYQFFVPCGKCIECRISHSIEWAYRVVAETRAHEHNCMITLTYADEYLPHDMSVSMYEMQTFLKRLRKEVQPSAIRFFGCGEYGEQFLRPHYHMVVFGHDFSDRYLFGHDKKGTKLYRSPQLEKVWPKGFSSVCEVEFDVAKYVAIYLQKPPADGRHRAFVNMSRNPGIGYQAIKPNLMETDKLYQDGKYIHLPRYYLKVLERSYPDQIADLKERRINHAISEYVEMMANLKHHITQIEYRKHRFEKIFGKPLDKNCMV"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:putative.VP4"
                     /inference="similar to AA sequence:INSD:AGT39916.1"
                     /inference="similar to AA sequence:INSD:NP_063900.1"
                     /note="1 probable transmembrane helix predicted by TMHMM"
ORIGIN
        1 gaaacggtgt cttgcatata actaagcgcc gatggctccc atcggccgcc tgagccccgt 
       61 ttttcgagcc ttaacgtagg cttgagaaat ggggctcaac actgtcgtga caaagtcgga 
      121 caaaacgcgc gcgattaacg tgcgtgaaaa agtccgacaa tcccacgact aaaacagagt 
      181 caaaaagggc agtccccgcc gcttgcggag catgcggata gtgatgaaaa cttgcacttt 
      241 ttacagattt tcacgtttcg atgaaaaaca taggcgtatt cattacttga taaatatacg 
      301 ccgactgaca ccatcgaaac gtgaaattac acttttcaca ggtgagagta tgtgtctaat 
      361 gcccgttaag cttgctaagt accaattctt tgttccgtgc ggcaagtgca tagagtgccg 
      421 tatatcccac tcgatcgagt gggcatatcg tgtcgttgcg gagacgagag cgcatgagca 
      481 caactgcatg attacgctta cttatgccga tgagtatctt cctcacgaca tgagcgtaag 
      541 catgtacgaa atgcagacct ttctgaagcg gttgcggaag gaggttcagc cttccgcaat 
      601 ccgtttcttt ggatgtggtg agtatggcga acagtttctt cggcctcact atcacatggt 
      661 tgtcttcggt cacgacttct ctgaccgata cctttttggt catgacaaaa agggtacgaa 
      721 actttatcgg tctcctcagc ttgagaaggt gtggccaaaa ggattctcga gcgtttgtga 
      781 ggtcgagttt gatgtggcta agtatgtagc catttacctt cagaagccgc ctgccgacgg 
      841 caggcatcga gcgttcgtga atatgagtcg taatcctggt atcggttacc aggctatcaa 
      901 gcctaacctt atggaaaccg ataaacttta ccaggacggc aaatacattc atcttccccg 
      961 ctattatctc aaagtccttg agaggtcgta tccagaccag attgcggact taaaagagcg 
     1021 tcgcataaac catgcgataa gcgaatacgt ggagatgatg gcgaacctaa aacaccacat 
     1081 cacacagata gaatatcgga aacatcgttt tgaaaagatt tttggaaaac ctcttgacaa 
     1141 aaattgcatg gtataatata atatgctcag ataaaaaaaa caaacatgta agaggcgacg 
     1201 gagttttgtt tcattttttg ttttcctcgc ctcactctat ttttgtgagg 
//
