FEATURES             Location/Qualifiers
     gene            complement(26..1399)
                     /locus_tag="Alpa_01"
     CDS             complement(26..1399)
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_01"
                     /translation="MGSRLFSYGDVKGRPSRAGFDLSKKFCFTAKAGELLPVYWKMLLPGTKVNLKDMHFTRTMPVNTAAYTRIKEYFDWYFVPLRLINKNLNPALVNMLDQSNIANSLIQNKVVSDEIPCFDYDTLTSCLKAFNTQHPSYLDIAGFERVPKTLKLLRYLRYGNFLYDTGFSTLPSKNMNYSSVKDFNLYAKWNLNVNVLPLAAYQKIYCDYFRFEQWEKAQPYTYNFDYYSGGNILTEYKGDPSDLFLKDNLFSLRYANYPKDLFMGILPSSQLGSVATINISHSSSAGVHLTSQEGYLTGTVASDGTTITVKNTRSLTPGISPVLRTNFADLNANFDILSFRIANAIQRMREIQQCAGQGYKEQLEARWNVKLSTALSDHCTYIGGNSSQINISEVLNNSLDTEQSQADIKGKGVGSGSGSESFETQEHGILMCIYHAVPVLDYQLTGPDLQLLNTLCY"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:putative.VP1"
                     /inference="similar to AA sequence:INSD:WP_004291032.1"
                     /inference="similar to AA sequence:INSD:WP_021963493.1"
                     /db_xref="InterPro:IPR016184"
                     /db_xref="InterPro:IPR003514"
                     /GO_component="GO:0019028 - viral capsid"
                     /GO_function="GO:0005198 - structural molecule activity"
                     /db_xref="eggNOG:bacteNOG05989"
                     /db_xref="eggNOG:bactNOG180503"
                     /db_xref="eggNOG:bctoNOG21249"
                     /db_xref="eggNOG:NOG133500"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(1433..1651)
                     /locus_tag="Alpa_02"
     CDS             complement(1433..1651)
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_02"
                     /translation="LDDLANPDFIGDSMVLMMRDRFRVSSVSQCDEYCRRLEKYLNSLSIYRYKVTQYPRDKSHEFISEQVLLPFD"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(1671..3356)
                     /locus_tag="Alpa_03"
     CDS             complement(1671..3356)
                     /product="predicted protein"
                     /protein_id="gnl|USP|Alpa_03"
                     /translation="MDKVGTIKYLAKRCYHGKNVINPYTGQVMYQPCGECPACLTRKASIRSMRVSLQKSLSKYTYFINPSYDQKYVPKCQIFKVHPDDPDSTLYELVVKPRRRGDYKMVQKVYSKKYKKVIKKEVDAPLSYTDDFSYYFNASEEYIRDFREQATLNVNGKYPHLQDYYGYISRKDGQLFVKRLRKHIFKFAGKYEKVHIYLVSEYGPVHFRPHFHILLFTDSDRVAKNIGRIVNSSWKFGRCDWSASRGDAESYVAGYVNSFSRLPYHLKQDDRVKPYSRFSNGFATSCFFDAKEAVRDSISRPIEETPLSPFLNGVPSLINGKLLAIRPPRSVVDSCFLRYACNGRLSSHELYWLVRSVSTTLSRSFQTVRRDNPDATLMDVCRLHLRSIYSMSSRSVEDFLSIENQLYTCYYYARLESPTTDVRSDDLFDSDCMRLYRLFSCVGKFISFWDITPSSSYEYIYRTVDLSKWYYSRLSYHMLRSQYTDLVGLVDLDEELVDFLIAPVTEDTPSSNGVSALEHHPPFESLVKSHPILSLAQAKAKTDCDNRVKHREINERNLKYV"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:putative.VP4"
                     /inference="similar to AA sequence:INSD:WP_021963494.1"
                     /inference="similar to AA sequence:INSD:WP_008775335.1"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(3460..3711)
                     /locus_tag="Alpa_04"
     CDS             complement(3460..3711)
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_04"
                     /translation="METKDFELMDEKLLAIVDFGKEKKFYIVNSSDLQCFLQHHSSKFLSTPPPVIFQSVLVYDPIVFQSQLDSFRKSISKSNSLNN"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(4116..5348)
                     /locus_tag="Alpa_05"
     CDS             complement(4116..5348)
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_05"
                     /translation="MDPTVLGAIISAGAGLGSSVASGIASGKMNKKSIKYNKWALQEQQRFQSEQAQLGRDWSEEMMSKANQWNLEQWNRENEYNLPVNRKARLLAAQINPALAMQGGSSVGQAASSPSSASAPSPASPSGASALPLNLQRPDYGTGFAQLSSAVNSYFENKQRDVITEGYGLDNALKATYGDRAYRLSLGKTEAEIDNIRASTAKSYADSALVNLQAKEKEILNKYLDAGQQLSLFLKIGELATMKTQRELLSAQTRKAIAEEIEVSARARGLKISNYIAEQTAERLIIATNEENRYRGIHARSSAAWTPVRDFYKTSQMSADLKASEVANIMAEFERYTKDTPGNRWIQKNIVPVSSALGPLLDAAAMFTVAGKLGKSVNIFKPKYGKTSKYSWKEYKYGENPKTPKYSWKE"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="protein motif:Phobius:1.01"
                     /note="Signal peptide predicted by Phobius with cleavage site between residues 21 and 22 "
                     /inference="protein motif:TMHMM:2.0"
                     /inference="similar to AA sequence:MV_prot:hypothetical.protein.BACEGG.02723"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(5351..5779)
                     /locus_tag="Alpa_06"
     CDS             complement(5351..5779)
                     /product="hypothetical protein"
                     /protein_id="gnl|USP|Alpa_06"
                     /translation="MEKRDIINVLSNSEFTTVRPIDELRFVEELDGSIRFVSDATLLLNEQRIINDIGEDNYRNFIRQLQVNPSSPYKDAKFTDEQLMTEIKSRYVQSPSEVREWVRDMLDKQEQISDEVKAKLEEMKASESESSESIETVESKSE"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:hypothetical.protein"
                     /inference="similar to AA sequence:INSD:WP_004291033.1"
                     /note="1 probable transmembrane helix predicted by TMHMM"
     gene            complement(5797..6270)
                     /locus_tag="Alpa_07"
     CDS             complement(5797..6270)
                     /product="putative uncharacterized protein"
                     /protein_id="gnl|USP|Alpa_07"
                     /translation="LDYQLTGPDLQLLNTYATDLPQPELDNLGLEALPYFTFVNDAVATQPNNVTVKSIIGYVPRYIAYKTDIDCVDGAFLTSLTSWVTPLTIDEIVTKISLGSGTGPFTPNYGLFKVSPYVLDSIFVSQCDSTVDTDQFLVESFFDVKLVQNLDYNGMPY"
                     /transl_table=11
                     /inference="ab initio prediction:Glimmer3:3.02"
                     /inference="similar to AA sequence:MV_prot:putative.VP1"
                     /inference="similar to AA sequence:INSD:WP_021963493.1"
                     /inference="similar to AA sequence:INSD:CDL65742.1"
                     /note="1 probable transmembrane helix predicted by TMHMM"
ORIGIN
        1 attatctaac tcgggttgag gaaggtcagt agcataaagt gttcaaaagc tgaagatcag 
       61 gaccagttaa ttgataatcc aaaacaggaa ccgcatgata aatgcacatc aaaataccat 
      121 gctcttgagt ttcaaaagat tcagaaccag aaccagaacc aacaccttta cctttaatat 
      181 cggcttgcga ttgctcggta tccaaactat tatttaaaac ctcggaaata ttaatctggg 
      241 aagaattacc accaatatag gtacagtgat cagacaaagc cgtagaaagc tttacattcc 
      301 aacgagcctc gagctgctct ttatatcctt ggcctgcaca ttgttggatt tcacgcatgc 
      361 gctgaatagc attagcaatg cggaaagaaa gaatatcaaa attagcattc aaatctgcaa 
      421 aattagtcct aagtacagga ctaattcccg gagtaagaga ccgagtattt ttaacagtaa 
      481 tagtagtgcc gtcactagca acggttccag ttaaataacc ctcctggcta gtcaaatgaa 
      541 caccagcact agaagaatga ctaatattaa tagtagcaac cgatcctaat tgagaagacg 
      601 gtaaaatacc cataaaaaga tctttcgggt aattagcata acgaagagaa aacaaattat 
      661 ctttcaaaaa caaatcagaa ggatcgcctt tatattcagt caaaatatta ccaccagaat 
      721 aataatcaaa attatacgta tatggttgag ccttctccca ttgctcaaaa cggaaatagt 
      781 cacaataaat tttctggtaa gcagctaaag gaagaacatt cacattcaaa ttccacttgg 
      841 cataaagatt aaaatcttta acagaagaat aattcatatt cttgctagga agagtagaaa 
      901 aaccagtatc atataaaaaa ttaccgtaac gaagataacg taataacttc aaagtcttag 
      961 gaacacgctc aaagccagcg atatcaagat acgacggatg ctgagtatta aaagctttca 
     1021 aacaagaagt caaagtatca taatcaaaac aaggaatctc atcagaaaca actttatttt 
     1081 gaatcaaaga attagcaatg ttagattgat ccaacatatt taccaaagca ggattcaaat 
     1141 tcttattgat cagacgaaga ggaacgaaat accagtcaaa atactccttg atacgagtgt 
     1201 aagcagcggt attaaccggc atggtacgag taaagtgcat atccttcaaa tttactttcg 
     1261 taccaggaag caacattttc caataaacag gcaacaattc acctgccttg gcagtaaaac 
     1321 aaaacttttt agaaaggtca aaaccggcac gagacggcct acctttcaca tctccataag 
     1381 aaaaaagtcg tgaacccata aattaaaatt taagttaaaa tttaagttta aactaatcaa 
     1441 aaggtaacaa cacctgctca gaaataaact cgtgagattt atctcgagga tactgcgtta 
     1501 ccttatatct ataaatactt agagagttta aatatttttc caaacgacga caatactcgt 
     1561 cacattggga aacagaagag acacggaaac gatcacgcat catcaaaacc atgctatctc 
     1621 caataaaatc gggattcgca agatcatcca atcgatatat ataaatagtt ctacacatat 
     1681 ttcaaatttc gttcattaat ttcacgatgc ttaacacgat tgtcacaatc cgtcttggcc 
     1741 ttagcttggg ctaaagacaa aataggatga gacttgacaa gagattcaaa aggcggatga 
     1801 tgttctaaag cagagacacc attcgaagaa ggagtatctt cagtaaccgg ggcaatcaaa 
     1861 aaatcaacta actcttcatc aagatcaact aaacccacga ggtcagtgta ctgagaacgt 
     1921 aacatatgat aagaaagccg agaataatac cacttagaaa gatcaaccgt cctataaatg 
     1981 tattcataag acgacgaagg agtaatatcc cagaacgaaa taaatttacc aacacacgaa 
     2041 aaaagacgat ataaccgcat acaatcacta tcgaataaat catccgagcg aacatcggtc 
     2101 gttggggatt cgagtcgagc ataataataa caagtataaa gttgattctc aatacttaaa 
     2161 aaatcttcca cagaacgaga agacatagaa tagatagatc gaagatgaag cctacaaaca 
     2221 tccatcaagg ttgcatcggg attgtctctt cggactgttt gaaaagatct ggataacgtc 
     2281 gtagatacgc ttcgtacaag ccaatataat tcatggctag acaatcgacc attgcacgca 
     2341 tatcggagaa agcaggaatc gacaaccgac ctgggagggc ggattgcgag aagttttcca 
     2401 ttaatgaggc tagggactcc attaaggaat ggagagagcg gggtctcttc gatcggtcgg 
     2461 gaaatactat ctctaacggc ttccttggcg tcaaaaaagc atgatgttgc aaatccgttc 
     2521 gagaaacgag aatacggttt aactctatca tcctgtttaa ggtgataggg aaggcgacta 
     2581 aatgagttaa catagcccgc aacgtacgat tcagcgtcgc ctctcgaggc agaccaatca 
     2641 caacgaccaa atttccagct cgaattaaca attcggccaa tattcttggc gaccctgtcc 
     2701 gagtccgtga ataataagat atggaaatgc ggacggaagt gtacgggtcc gtattctgat 
     2761 acaaggtaga tatgtacttt ttcatatttt ccagcaaatt taaatatatg cttacgcaaa 
     2821 cgtttaacaa ataattggcc gtccttacga gaaatataac cgtaataatc ttgtaaatga 
     2881 ggatactttc cgttaacatt caaagtggcc tgctcacgaa aatcacggat atattcttca 
     2941 gaagcattaa aataataaga aaaatcatca gtataagaaa gaggagcatc tacttccttt 
     3001 ttaatgacct ttttatattt cttagaatac accttttgaa ccatcttata atctcctcga 
     3061 cgtctaggtt tgacaacaag ctcgtaaaga gttgaatcag gatcatcagg atgaacctta 
     3121 aaaatttgac acttcggcac atatttttga tcataagaag gattaatgaa ataagtgtac 
     3181 tttgataagg acttttgtaa acttactcgc atagagcgaa tagacgcctt gcgagtaaga 
     3241 caagcgggac attcgccgca tggttggtac ataacttgcc ctgtataagg gtttataacg 
     3301 tttttaccat ggtaacagcg tttagccaaa tattttatgg taccaacctt atccatacta 
     3361 ctgccctgct agaattgttc ctaacgaagt taacaaagaa acgatcgcag aaatgattgc 
     3421 ggaccaaatt ttgttctttt tgtcagttgt agccataaat caattattta aagaattaga 
     3481 cttagaaata gatttccgaa aagaatctaa ttgagattga aaaacaatag gatcataaac 
     3541 taaaacagat tgaaaaataa ccggaggagg agtagacaaa aatttactag aatgatgttg 
     3601 caaaaaacat tgaagatcag aagaattaac aatataaaat ttcttctcct taccaaaatc 
     3661 aacgatagca agtaattttt catccattaa ctcaaaatct tttgtttcca tagtaccaac 
     3721 ttttaaaatt aatatttcat tgcaagtata gtaaaaaaaa agatatgtta caacggtgtc 
     3781 acttgtgggt aattatgaca agagaaaacc tttgcagggt gataacctgc aaatccttcg 
     3841 gacacaagta tttagatttc atagttaaag taacttaaat aatttaaacg ctgccttcca 
     3901 gttccctgca actcccaaag ggagattgga gggaaatagg aaggtcaggc agctaaatgg 
     3961 tgactcgagt gctcgccgca gggcaggagg atgaggaaat ccgagacctg gaattctata 
     4021 tttgaatgaa caggacgtaa aaagaaaaga gttacattac tgcaactctt tcggaatatc 
     4081 caatacatca attccaacaa cagaattaaa atatgttact ctttccaaga atacttcgga 
     4141 gttttcggat tttcaccgta cttatactct ttccaagaat acttcgaagt tttaccgtac 
     4201 ttaggcttaa aaatattaac agacttacca agcttaccag cgacagtaaa catagcagca 
     4261 gcatcaagca aaggaccaag ggcagaagac acgggaacga tattcttttg aatccaacga 
     4321 ttaccaggag tatccttcgt gtaacgctcg aattcagcca tgatattcgc aacctcagag 
     4381 gctttaagat cggcagacat ttgactagtc ttataaaagt ctcgaacagg agtccaagca 
     4441 gcagacgaac gagcgtgaat gccacggtaa cgattttcct cgttagtagc aataatcaaa 
     4501 cgctcagcag tctgttcagc aatataatta gaaatcttaa gaccacgagc acgagcagaa 
     4561 acctcaattt cctcagcaat agccttacga gtctgagcag acaacaattc acgctgagtt 
     4621 ttcatcgtag caagttcacc aatcttgaga aataaagaaa gttgctggcc agcatccaga 
     4681 tatttattca aaatctcttt ctctttagcc tgcaaattaa ccaaagcaga atcagcataa 
     4741 gacttagcag tagaagcacg aatattatca atttcagcct cagtcttgcc aaggcttaac 
     4801 cgataagcac gatcaccata cgtagccttt aaagcattat caaggccata accttcagta 
     4861 ataacatcac gctgtttatt ctcaaaataa gaattcacag cagacgaaag ttgagcaaaa 
     4921 ccagtaccat aatctggacg ttgtaagttc aaaggaagag ctgacgcacc agacggggac 
     4981 gcaggagaag gagcagaagc cgaagacgga gaagaggcag cctgtccaac agaagagcca 
     5041 ccttgcatag caagagccgg gttgatctgg gctgctagaa gacgtgcttt tcgattcacg 
     5101 ggaagattgt attcattctc acgattccat tgctccaaat tccactgatt cgccttagac 
     5161 atcatctctt cagaccaatc acgaccaagt tgagcttgtt cagattgaaa tctttgctgt 
     5221 tcctgtaaag cccatttatt atacttgata ctctttttat tcatcttgcc agaagcaatg 
     5281 ccagaagcaa ctgaacttcc aagaccggct ccagcagaga taatagcacc taagactgta 
     5341 ggatccatga ttattcagat ttagattcaa cagtttcaat agattcagaa gattcggatt 
     5401 cagaagcctt catttcttct aatttagcct taacttcatc agaaatttgt tcctgcttat 
     5461 caagcatatc acgaacccat tcacgaactt cagaaggaga ttgaacataa cgagatttaa 
     5521 tctcggtcat caattgctcg tcggtaaatt tagcatcctt ataaggagaa gaaggattaa 
     5581 cctgtaattg acgaatgaaa ttacgataat tatcctcacc aatatcattt ataatacgct 
     5641 gctcatttaa aagcaacgtg gcatcagaaa caaaacgaat agaaccgtca agttcttcaa 
     5701 caaaacgcaa ttcatcaata ggacgaacag tagtgaattc agagttcgaa agaacattta 
     5761 taatatctct tttttccata acaaacaaat tttagattaa tacggcatac cattataatc 
     5821 aagattctga acaagcttca catcaaagaa agattcaacg aggaactgat ccgtatcaac 
     5881 agtactatca cactgagaaa caaaaataga atctaaaaca taaggtgaaa ctttaaaaag 
     5941 accataatta ggagtaaaag gaccagtacc agaaccaaga gaaatcttgg taacaatctc 
     6001 atcaatagtc aaaggagtaa cccaagacgt taaagaagtc aagaaagcac catctacaca 
     6061 atcaatatcc gtcttataag ctatataacg aggaacataa cctataatag atttcacagt 
     6121 aacattatta ggctgagtag caacagcatc attcacaaaa gtaaaatacg gaagagcttc 
     6181 caatccaaga ttatctaact cgggttgagg aaggtcagta gcataagtgt tcaaaagctg 
     6241 aagatcagga ccagttaatt gataatccaa aacaggaccg ca 
//
