bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: all_orgs
           14,240,465 sequences; 5,121,972,263 total letters



Query= Contig-10_CDS_annotation_glimmer3.pl_2_1

Length=279
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  lcm:102349520  MRVI1; murine retrovirus integration site 1 homolog  38.9    1.3
  tet:TTHERM_00579040  cation channel family protein                  37.7    2.7
  dwi:Dwil_GK16620  GK16620 gene product from transcript GK16620-RA   37.0    5.3


> lcm:102349520  MRVI1; murine retrovirus integration site 1 homolog
Length=1139

 Score = 38.9 bits (89),  Expect = 1.3, Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 59/133 (44%), Gaps = 14/133 (11%)

Query  126  LDNEAKGILNKYLDQEQQLDLNVKAADYYQRMSAGYLSYAETKKALADEALAAARTRGQK  185
            L   A   + K   Q  ++D  V  A      +   LS AE+K+ALA+E L AA  R ++
Sbjct  181  LKESASETVAKSYKQVTEMDDKVSKATLMMHAAQEKLSVAESKRALAEEKLKAAMERVEE  240

Query  186  ISNEVASRIAESQIAANIAANQSSEAYHNEELKLGLSQDNA-RSKNIEEWYRSRNEKKRY  244
            +  ++ +      +A   AA + S       + LG+SQ    RS  I E +    E+++ 
Sbjct  241  VQCQLVA------LAERTAATEQS-------MDLGMSQAACTRSSKIRELHFQTKEEEKL  287

Query  245  KYYDADKWVEYGT  257
              +  D  V+Y  
Sbjct  288  VSFTVDHNVQYCC  300


> tet:TTHERM_00579040  cation channel family protein
Length=1469

 Score = 37.7 bits (86),  Expect = 2.7, Method: Composition-based stats.
 Identities = 28/83 (34%), Positives = 38/83 (46%), Gaps = 6/83 (7%)

Query  11   QSAGNGATAASSGNAVMQPFQADYSGIGSSIGNIFQYDLMQSEKSQLQGARQLSDAKAME  70
            Q+ GN  T     N    P   DYS  G S  NIFQYD   +   Q   A  L+ A+A++
Sbjct  180  QTLGNNNTF----NIWDNPITPDYSTYGPS--NIFQYDSYNNGFVQFFSAFNLTHAQAVD  233

Query  71   TLSNIDWGNLTAETRNYLRSTGL  93
             L+N+       E  NY+   G+
Sbjct  234  MLTNLSNDQFFDEQTNYISCDGV  256


> dwi:Dwil_GK16620  GK16620 gene product from transcript GK16620-RA
Length=1645

 Score = 37.0 bits (84),  Expect = 5.3, Method: Composition-based stats.
 Identities = 39/139 (28%), Positives = 59/139 (42%), Gaps = 9/139 (6%)

Query  118   RAQRSGMLLDNEAKGILNKYLDQEQQLDLNVKAADYYQRMSAGYLSYAETKKALADEALA  177
             + ++  + L   AK    K     +Q D  +K A+      AG+ S  E  K  AD+AL 
Sbjct  1366  KQKQDDIELLERAKAAFEKATKAVKQGDNTLKEANNTYNTLAGFQSDVEASKEKADQALQ  1425

Query  178   AARTRGQKISN--EVASRIAESQIAANIAANQSSEAYHNEELKLGLSQDNARSKNIEEWY  235
                +  Q+I N   + S+  E+   AN  AN++ E     + K         SK+ E   
Sbjct  1426  TVPSIEQEIQNAKHLISQADEALDGANKNANEAKENAQEAQKKYA----EQASKDAELIR  1481

Query  236   RSRNEKK---RYKYYDADK  251
             R  NE K   R   Y+AD+
Sbjct  1482  RKANETKVAARNLRYEADQ  1500



Lambda      K        H        a         alpha
   0.311    0.126    0.343    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 445107121113