bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: all_orgs
           14,240,465 sequences; 5,121,972,263 total letters





Query= Contig-11_CDS_annotation_glimmer3.pl_2_5

Length=76
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  kct:CDEE_0726  2-oxoglutarate dehydrogenase E2 component            32.7    4.8
  kci:CKCE_0178  odhB; dihydrolipoamide succinyltransferase           32.7    4.8
  dse:Dsec_GM10292  GM10292 gene product from transcript GM10292-RA   31.2    6.7
  dpo:Dpse_GA22302  GA22302 gene product from transcript GA22302-RA   32.3    7.4
  amr:AM1_3429  16S ribosomal RNA methyltransferase RsmE              32.0    8.0


> kct:CDEE_0726  2-oxoglutarate dehydrogenase E2 component
Length=404

 Score = 32.7 bits (73),  Expect = 4.8, Method: Composition-based stats.
 Identities = 21/50 (42%), Positives = 31/50 (62%), Gaps = 2/50 (4%)

Query  17   IEIVRAISTMIIA--IITTLCTQACTMSLSVSKNNSNSTQKTEQTSTSSV  64
            IEIVR  S+ +I+  +I  + T A   S+ VSKN SN ++ + QTS  +V
Sbjct  58   IEIVRGDSSTVISGELIAKIDTAAKATSVDVSKNVSNPSETSNQTSNHNV  107


> kci:CKCE_0178  odhB; dihydrolipoamide succinyltransferase
Length=404

 Score = 32.7 bits (73),  Expect = 4.8, Method: Composition-based stats.
 Identities = 21/50 (42%), Positives = 31/50 (62%), Gaps = 2/50 (4%)

Query  17   IEIVRAISTMIIA--IITTLCTQACTMSLSVSKNNSNSTQKTEQTSTSSV  64
            IEIVR  S+ +I+  +I  + T A   S+ VSKN SN ++ + QTS  +V
Sbjct  58   IEIVRGDSSTVISGELIAKIDTAAKATSVDVSKNVSNPSETSNQTSNHNV  107


> dse:Dsec_GM10292  GM10292 gene product from transcript GM10292-RA
Length=92

 Score = 31.2 bits (69),  Expect = 6.7, Method: Compositional matrix adjust.
 Identities = 17/64 (27%), Positives = 34/64 (53%), Gaps = 4/64 (6%)

Query  17  IEIVRAISTMIIAIITTLCTQACTMSLSVSKNNSNSTQK----TEQTSTSSVDSTHININ  72
           + +VR     +IA   T C+ + T+  +V+  + NST+K     E+ ++S  D  ++ ++
Sbjct  16  VRVVRCWWWWLIAPALTSCSSSETLLQTVAPAHGNSTRKRDARRERATSSGEDPKNVLLD  75

Query  73  PKNY  76
           P  Y
Sbjct  76  PSQY  79


> dpo:Dpse_GA22302  GA22302 gene product from transcript GA22302-RA
Length=442

 Score = 32.3 bits (72),  Expect = 7.4, Method: Composition-based stats.
 Identities = 13/44 (30%), Positives = 26/44 (59%), Gaps = 0/44 (0%)

Query  31  ITTLCTQACTMSLSVSKNNSNSTQKTEQTSTSSVDSTHININPK  74
           + TLC  AC ++ S++ +N+ S+ +    S S++D     +NP+
Sbjct  4   LRTLCLMACLVAASMANSNTGSSSRHRSNSLSNIDQPSNWVNPR  47


> amr:AM1_3429  16S ribosomal RNA methyltransferase RsmE
Length=263

 Score = 32.0 bits (71),  Expect = 8.0, Method: Composition-based stats.
 Identities = 16/62 (26%), Positives = 35/62 (56%), Gaps = 5/62 (8%)

Query  13   GNQWIEIVRAISTMIIAIITTLCTQACTMSLSVSKNNSNSTQKTEQTSTSSVDSTHININ  72
            GN + ++VR+++ + ++ I  L +Q   +     K +SN  Q+ ++ +T + + +H  I 
Sbjct  91   GNHFDQVVRSVTELGVSYIVPLISQRTLL-----KPSSNRIQRWQRIATEAAEQSHRQII  145

Query  73   PK  74
            PK
Sbjct  146  PK  147



Lambda      K        H        a         alpha
   0.310    0.118    0.320    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 129127441832