bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: all_orgs
           14,240,465 sequences; 5,121,972,263 total letters





Query= Contig-11_CDS_annotation_glimmer3.pl_2_8

Length=106
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  mar:MAE_45000  hypothetical protein                                 36.2    0.11
  mno:Mnod_0081  hypothetical protein                                 35.0    1.4
  gba:J421_1018  Aldose 1-epimerase                                   34.3    3.1
  bse:Bsel_1439  type II secretion system protein E                   33.1    7.8


> mar:MAE_45000  hypothetical protein
Length=55

 Score = 36.2 bits (82),  Expect = 0.11, Method: Compositional matrix adjust.
 Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 5/55 (9%)

Query  16  SVECFEGEQIEEKVRRIVNNNEPITDGAPIIFTEKKDGVRPEYNVRTDRWDIALD  70
           S+    GE + +K +R +NN   IT G  IIF EK     PE++ R+ +W + LD
Sbjct  2   SIGYISGEALMQKAKRRINNQFLIT-GFSIIFREKV----PEFSPRSLQWPVLLD  51


> mno:Mnod_0081  hypothetical protein
Length=198

 Score = 35.0 bits (79),  Expect = 1.4, Method: Compositional matrix adjust.
 Identities = 18/65 (28%), Positives = 29/65 (45%), Gaps = 4/65 (6%)

Query  35   NNEPITDGAPIIFTEKKDGVRPEYNVRTDRWDIALDAMNKIDMARKAHK----ENEVKPE  90
            N E I     ++    +D  R  + +   RW   LD +NK+  AR  H+    ++EV  E
Sbjct  102  NAEAIARCGTVLTQAVQDAFRNSFELGQKRWQSNLDGLNKLTRARSVHELAMLQSEVARE  161

Query  91   DFGNV  95
               N+
Sbjct  162  SLQNL  166


> gba:J421_1018  Aldose 1-epimerase
Length=271

 Score = 34.3 bits (77),  Expect = 3.1, Method: Compositional matrix adjust.
 Identities = 19/80 (24%), Positives = 36/80 (45%), Gaps = 3/80 (4%)

Query  3   KKTIIPGYTGRMKSVECFEGEQIEEKVRRIVNNNEPITDGAPIIFTEKKD-GVRPEYN-V  60
           +  ++P Y   + +    +GEQ+    R        I  G P++F +  D G  P++   
Sbjct  16  RAAVLP-YGAHVTAWSTADGEQLYLSPRTAYEEGSAIRGGVPVVFPQFSDRGPLPKHGFA  74

Query  61  RTDRWDIALDAMNKIDMARK  80
           RT  WD+   A + + +A +
Sbjct  75  RTRAWDVLAHAADAVTLALR  94


> bse:Bsel_1439  type II secretion system protein E
Length=555

 Score = 33.1 bits (74),  Expect = 7.8, Method: Compositional matrix adjust.
 Identities = 16/33 (48%), Positives = 22/33 (67%), Gaps = 3/33 (9%)

Query  9    GYTGRMKSVECFEGEQIEEKVRRIVNNNEPITD  41
            GY GRM   E  E   I++K+RR+V NN+P+ D
Sbjct  488  GYKGRMAIHEVLE---IDDKIRRMVMNNQPMED  517



Lambda      K        H        a         alpha
   0.312    0.133    0.388    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 125672059028