bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: all_orgs
           14,240,465 sequences; 5,121,972,263 total letters





Query= Contig-12_CDS_annotation_glimmer3.pl_2_2

Length=136
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  mel:Metbo_1357  CCA-adding enzyme (EC:2.7.7.72)                     36.2    1.4
  tcc:TCM_009605  hypothetical protein                                35.8    1.9
  ddh:Desde_1630  methylase                                           35.4    2.4


> mel:Metbo_1357  CCA-adding enzyme (EC:2.7.7.72)
Length=461

 Score = 36.2 bits (82),  Expect = 1.4, Method: Composition-based stats.
 Identities = 23/91 (25%), Positives = 38/91 (42%), Gaps = 6/91 (7%)

Query  19   DFLFDHNADGSVTFCSDYGILFGQKAIDNMNQTQLRRYMNSLVPRSSNYTRNYNDDFLLD  78
            D L     D S      YG+  G + I  M      RY       S  Y   Y +D+ +D
Sbjct  66   DILMKFPLDTSTKLLKKYGLEIGHETIKKMEGAAEERYA------SHPYVTGYINDYYID  119

Query  79   YCKDRNIQSATEMASWLDHLLSEGQSLESDL  109
            +    +I+S  E+ S +D  L   + ++++L
Sbjct  120  FVPCYDIKSYKELKSAVDRTLLHTKYIQANL  150


> tcc:TCM_009605  hypothetical protein
Length=302

 Score = 35.8 bits (81),  Expect = 1.9, Method: Compositional matrix adjust.
 Identities = 22/78 (28%), Positives = 42/78 (54%), Gaps = 5/78 (6%)

Query  2    TSEMLAQGVL-PEPNPVGDF-LFDHNADGSVTFCSDYGILFGQKAIDNMNQTQLRRYMNS  59
              ++L+ G++ P  +P+G   LF    DGS+  C DY  L+      + +Q ++R+    
Sbjct  114  VEDLLSNGLICPNVSPLGPLVLFVRKKDGSLKLCIDYRQLYKIDLHSSYHQLKIRQ---E  170

Query  60   LVPRSSNYTRNYNDDFLL  77
             VP++  YT+  + +FL+
Sbjct  171  DVPKTGFYTKYGHYEFLV  188


> ddh:Desde_1630  methylase
Length=230

 Score = 35.4 bits (80),  Expect = 2.4, Method: Compositional matrix adjust.
 Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 3/66 (5%)

Query  5    MLAQGVLPEPNPVGDFLFDHNADGSVTFCSDYGILFGQKAIDNMNQTQLRRYMNSLVPRS  64
            M A   +PEP  V   LF+H   G    C   G++ G+ A  +  +  +RR  +S+  R+
Sbjct  118  MTAFEFVPEPEKVLQKLFNHLKPGG---CLLIGLIAGESAWSDYYEEAVRRKPDSVFARA  174

Query  65   SNYTRN  70
            + YT+ 
Sbjct  175  ALYTKE  180



Lambda      K        H        a         alpha
   0.312    0.126    0.357    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 128928985430