bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: all_orgs
           14,240,465 sequences; 5,121,972,263 total letters





Query= Contig-18_CDS_annotation_glimmer3.pl_2_4

Length=63
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  kse:Ksed_07740  succinyl-CoA synthetase subunit alpha (EC:6.2.1.5)  33.1    2.8
  hmg:101234395  uncharacterized LOC101234395                         32.3    4.2
  cgy:CGLY_09730  murF; UDP-N-acetylmuramoyl-tripeptide-D-alanyl-...  31.6    9.8


> kse:Ksed_07740  succinyl-CoA synthetase subunit alpha (EC:6.2.1.5)
Length=297

 Score = 33.1 bits (74),  Expect = 2.8, Method: Composition-based stats.
 Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 0/38 (0%)

Query  6    HTYELRKLENDDSVTTVLVLNEEPKDAKRKAADYANQH  43
            H   L   +NDD    ++++ E   DA+ +AADY  +H
Sbjct  192  HIDALEAFQNDDETDAIVMIGEIGGDAEERAADYIKEH  229


> hmg:101234395  uncharacterized LOC101234395
Length=178

 Score = 32.3 bits (72),  Expect = 4.2, Method: Compositional matrix adjust.
 Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)

Query  17   DSVTTVLVLNEEPKDAKRKAADYANQHPGLYSLRK-VEIVETYFTEK  62
            ++V  VL +NE+  +A    A YAN HP L SL   +E  +T+ + +
Sbjct  74   NNVLQVLRINEQHAEAASIKAQYANLHPSLRSLNNALEFAKTFLSNQ  120


> cgy:CGLY_09730  murF; UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine 
ligase (EC:6.3.2.10)
Length=506

 Score = 31.6 bits (70),  Expect = 9.8, Method: Composition-based stats.
 Identities = 17/40 (43%), Positives = 24/40 (60%), Gaps = 3/40 (8%)

Query  10   LRKLENDDSVTTVLVLNEEPKDAKRKAADYANQHPGLYSL  49
            +R++EN D+   VL LN EP D     A YA+   GL+S+
Sbjct  458  VRQVENADAAVNVLDLNVEPNDVVLVKASYAD---GLWSV  494



Lambda      K        H        a         alpha
   0.310    0.128    0.351    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 129459567664