bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: all_orgs
           14,240,465 sequences; 5,121,972,263 total letters





Query= Contig-24_CDS_annotation_glimmer3.pl_2_3

Length=97
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  nfi:NFIA_037130  SET and WW domain protein                          35.4    1.1
  bsc:COCSADRAFT_40358  hypothetical protein                          34.7    2.1
  bor:COCMIDRAFT_6491  hypothetical protein                           34.3    2.2
  bze:COCCADRAFT_23883  hypothetical protein                          34.3    2.3
  adl:AURDEDRAFT_170104  FAD/NAD(P)-binding domain-containing pro...  33.9    3.5
  fli:Fleli_3163  hypothetical protein                                33.9    3.5


> nfi:NFIA_037130  SET and WW domain protein
Length=967

 Score = 35.4 bits (80),  Expect = 1.1, Method: Compositional matrix adjust.
 Identities = 21/68 (31%), Positives = 39/68 (57%), Gaps = 4/68 (6%)

Query  22   VLNGSGSVEVLPGRPDVQASDSDFRKGEDYDPPLDFDPNSFSRIDKFDGLESGQGVIDDF  81
            + NG  +VE +    DV+ SD +  K E+ D  +D DP    +  + D ++ G+G  ++ 
Sbjct  800  MTNGHNTVEDV----DVKLSDGEAEKVEENDTFMDSDPQGILKRKREDEMDIGEGAAEEA  855

Query  82   LERQRSSS  89
            ++RQ+SS+
Sbjct  856  MKRQKSST  863


> bsc:COCSADRAFT_40358  hypothetical protein
Length=388

 Score = 34.7 bits (78),  Expect = 2.1, Method: Composition-based stats.
 Identities = 21/56 (38%), Positives = 25/56 (45%), Gaps = 0/56 (0%)

Query  25   GSGSVEVLPGRPDVQASDSDFRKGEDYDPPLDFDPNSFSRIDKFDGLESGQGVIDD  80
             S SV   P RP     DSD+    DY PPLD  P   S+I K +       + DD
Sbjct  250  ASVSVSPKPARPATNRDDSDYNAIPDYSPPLDTLPKGNSKILKAEWKGQALSLADD  305


> bor:COCMIDRAFT_6491  hypothetical protein
Length=389

 Score = 34.3 bits (77),  Expect = 2.2, Method: Composition-based stats.
 Identities = 21/56 (38%), Positives = 25/56 (45%), Gaps = 0/56 (0%)

Query  25   GSGSVEVLPGRPDVQASDSDFRKGEDYDPPLDFDPNSFSRIDKFDGLESGQGVIDD  80
             S SV   P RP     DSD+    DY PPLD  P   S+I K +       + DD
Sbjct  251  ASVSVSPKPARPATNRDDSDYNAIPDYSPPLDTLPKGNSKILKAEWKGQALSLADD  306


> bze:COCCADRAFT_23883  hypothetical protein
Length=392

 Score = 34.3 bits (77),  Expect = 2.3, Method: Composition-based stats.
 Identities = 21/56 (38%), Positives = 25/56 (45%), Gaps = 0/56 (0%)

Query  25   GSGSVEVLPGRPDVQASDSDFRKGEDYDPPLDFDPNSFSRIDKFDGLESGQGVIDD  80
             S SV   P RP     DSD+    DY PPLD  P   S+I K +       + DD
Sbjct  254  ASVSVSPKPARPATNRDDSDYNAIPDYSPPLDTLPKGNSKILKAEWKGQALSLADD  309


> adl:AURDEDRAFT_170104  FAD/NAD(P)-binding domain-containing protein
Length=583

 Score = 33.9 bits (76),  Expect = 3.5, Method: Composition-based stats.
 Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 1/47 (2%)

Query  10   PEYRSRGERIMSVLNGSGSVEVLPG-RPDVQASDSDFRKGEDYDPPL  55
            PEY  RG+R+  + NGS +++VLP  +P+V    +  R      PPL
Sbjct  191  PEYDLRGKRVGLIGNGSSAIQVLPAIQPEVSHLTTFIRGATWIAPPL  237


> fli:Fleli_3163  hypothetical protein
Length=1118

 Score = 33.9 bits (76),  Expect = 3.5, Method: Composition-based stats.
 Identities = 18/41 (44%), Positives = 22/41 (54%), Gaps = 0/41 (0%)

Query  42   DSDFRKGEDYDPPLDFDPNSFSRIDKFDGLESGQGVIDDFL  82
            D+ F       P  DF P SF R D+F   E+  G+IDDFL
Sbjct  750  DATFEHSVTGRPDYDFAPGSFIRQDEFAFDENLDGIIDDFL  790



Lambda      K        H        a         alpha
   0.311    0.135    0.378    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 125035833240