bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: all_orgs
           14,240,465 sequences; 5,121,972,263 total letters





Query= Contig-27_CDS_annotation_glimmer3.pl_2_3

Length=65
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  cic:CICLE_v10024062mg  hypothetical protein                         37.0    0.13
  pstu:UIB01_21105  lytic transglycosylase                            37.4    0.14
  cic:CICLE_v10024495mg  hypothetical protein                         36.6    0.25
  psh:Psest_4145  lytic murein transglycosylase                       36.2    0.27
  tru:101062501  lysosomal-trafficking regulator-like                 32.0    8.4


> cic:CICLE_v10024062mg  hypothetical protein
Length=303

 Score = 37.0 bits (84),  Expect = 0.13, Method: Composition-based stats.
 Identities = 20/58 (34%), Positives = 34/58 (59%), Gaps = 3/58 (5%)

Query  2    DFSQTMEIIDQVYQDMFVETVLKFEVLEK--SVDVGSAGRMAHQERLDGMRKLYTKLI  57
            +F+QT+E +  + +DM +E      +LEK  ++++  AG  AH   LD  R+ Y K+I
Sbjct  89   NFNQTLEYVKDI-RDMRMEVCCTLGMLEKQQAIELKKAGLTAHNHNLDTSREYYPKII  145


> pstu:UIB01_21105  lytic transglycosylase
Length=373

 Score = 37.4 bits (85),  Expect = 0.14, Method: Composition-based stats.
 Identities = 18/55 (33%), Positives = 32/55 (58%), Gaps = 2/55 (4%)

Query  5   QTMEIIDQVYQDMFVETVLKFEVLEKSVDVGSAGRMAHQERLDGMRKLYTKLIKE  59
           Q +E++ + ++ MF++ +LK   + K+ DV SAG       LD MR  Y +++ E
Sbjct  26  QQLEMVSEQFEAMFLQQILK--QMRKAGDVLSAGNPMRSRELDTMRDFYDEVLAE  78


> cic:CICLE_v10024495mg  hypothetical protein
Length=372

 Score = 36.6 bits (83),  Expect = 0.25, Method: Composition-based stats.
 Identities = 20/58 (34%), Positives = 34/58 (59%), Gaps = 3/58 (5%)

Query  2    DFSQTMEIIDQVYQDMFVETVLKFEVLEK--SVDVGSAGRMAHQERLDGMRKLYTKLI  57
            +F+QT+E +  + +DM +E      +LEK  ++++  AG  AH   LD  R+ Y K+I
Sbjct  143  NFNQTLEYVKDI-RDMGMEVCCTLGMLEKQQAIELKKAGLTAHNHNLDTSREYYPKII  199


> psh:Psest_4145  lytic murein transglycosylase
Length=370

 Score = 36.2 bits (82),  Expect = 0.27, Method: Composition-based stats.
 Identities = 18/55 (33%), Positives = 32/55 (58%), Gaps = 2/55 (4%)

Query  5   QTMEIIDQVYQDMFVETVLKFEVLEKSVDVGSAGRMAHQERLDGMRKLYTKLIKE  59
           Q +E++ + ++ MF++ +LK   + K+ DV SAG       LD MR  Y +++ E
Sbjct  26  QQLEMVSEQFEAMFLQQILK--QMRKAGDVLSAGNPMRSRELDTMRDFYDEVLAE  78


> tru:101062501  lysosomal-trafficking regulator-like
Length=3764

 Score = 32.0 bits (71),  Expect = 8.4, Method: Composition-based stats.
 Identities = 19/51 (37%), Positives = 27/51 (53%), Gaps = 6/51 (12%)

Query  3    FSQTMEIIDQVYQ----DMFVETVLKFEVLEKSVDVGSAGRMAHQERLDGM  49
            FSQ +E+I +  Q    D+F  TVL+ E L ++ D    G     ERL G+
Sbjct  427  FSQALELIHEFVQHCGLDLFETTVLRLEGLSRATDTEIVGEAT--ERLRGL  475



Lambda      K        H        a         alpha
   0.321    0.136    0.366    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 128662101624