bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: all_orgs
14,240,465 sequences; 5,121,972,263 total letters
Query= Contig-36_CDS_annotation_glimmer3.pl_2_1
Length=422
Score E
Sequences producing significant alignments: (Bits) Value
clp:CPK_ORF00729 hypothetical protein 81.6 1e-15
cpt:CpB0227 hypothetical protein 73.2 8e-13
cpj:CPj0222 hypothetical protein 73.2 8e-13
cpa:CP0543 hypothetical protein 73.2 8e-13
cpn:CPn0222 hypothetical protein 73.2 8e-13
efd:EFD32_2281 hypothetical protein 43.9 0.034
spe:Spro_1781 hypothetical protein 40.8 0.22
ecm:EcSMS35_4793 hypothetical protein 40.4 0.44
xcp:XCR_2349 filamentous phage phiLf replication initiation pr... 40.8 0.46
xcv:XCV2471 filamentous phage phiLf replication initiation pro... 40.8 0.48
xcb:XC_2107 replication initiation protein 40.4 0.50
xcc:XCC2075 gII; replication initiation protein 40.4 0.50
xcc:XCC2058 gII; replication initiation protein 40.4 0.51
ypb:YPTS_1204 hypothetical protein 39.7 0.57
xom:XOO_2146 replication initiation protein 40.4 0.60
ecz:ECS88_4652 hypothetical protein 40.0 0.62
ecq:ECED1_3481 hypothetical protein 40.0 0.62
ecv:APECO1_2309 hypothetical protein 40.0 0.62
ecc:c4558 hypothetical protein 40.0 0.62
senn:SN31241_6720 Intergenic-region protein 39.7 0.69
rus:RBI_I01590 hypothetical phage protein 39.7 0.79
eck:EC55989_4880 hypothetical protein 39.3 0.88
vfu:vfu_A02526 phage protein 40.0 1.2
ear:ST548_p3284 FIG00947185: hypothetical protein 38.5 1.5
sri:SELR_11130 hypothetical protein 38.9 1.6
pmr:PMI3479 hypothetical protein 38.1 2.0
cca:CCA00722 hypothetical protein 36.6 2.0
pse:NH8B_2279 putative phage replication protein 38.5 2.2
plm:Plim_2985 hypothetical protein 38.9 2.5
elh:ETEC_3936 hypothetical protein 37.7 3.6
gap:GAPWK_1390 Phage replication protein 38.1 3.6
eab:ECABU_c49190 hypothetical protein 37.4 3.6
mmk:MU9_127 transposase 37.0 4.1
sauy:SAI8T7_1001590 M23 family peptidase 37.0 4.3
saux:SAI6T6_1001590 M23 family peptidase 37.0 4.3
sauw:SAI5S5_1001580 M23 family peptidase 37.0 4.3
sauv:SAI7S6_1001590 M23 family peptidase 37.0 4.3
sauq:SAI4T8_1001590 M23 family peptidase 37.0 4.3
sauk:SAI3T3_1001590 M23 family peptidase 37.0 4.3
sauj:SAI2T2_1001590 M23 family peptidase 37.0 4.3
saut:SAI1T1_2001590 M23 family peptidase 37.0 4.3
suy:SA2981_0213 M23/M37 peptidase domain protein 37.0 4.3
suc:ECTR2_173 peptidase family M23 family protein 37.0 4.3
sad:SAAV_0178 M23/M37 peptidase domain-containing protein 37.0 4.3
saj:SaurJH9_0197 peptidase M23B 37.0 4.3
sah:SaurJH1_0203 peptidase M23B 37.0 4.3
saw:SAHV_0211 hypothetical protein 37.0 4.3
sav:SAV0212 hypothetical protein 37.0 4.3
sau:SA0205 hypothetical protein 37.0 4.3
amg:AMEC673_10165 prophage 37.4 4.5
> clp:CPK_ORF00729 hypothetical protein
Length=121
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 65/108 (60%), Gaps = 6/108 (6%)
Query 68 FLIVPCHKCPLCNEKKAQQWSFRALCESYTSNKQAYFITLTYNNEHLPKNGVFPE-EIQL 126
++++PC KC C + A+ WS+R + E+ K F+TLTY+++HLP+ G + +QL
Sbjct 19 WVLMPCLKCRFCRTQHAKVWSYRCVHEASLYEKNC-FLTLTYDDKHLPQYGSLVKLHLQL 77
Query 127 FFKRLRTKLDRRGISHNLRYIAVSEYGHWSKRPHYHIILWNFPDNFDS 174
F KRLR ++ H +RY EYG +RPHYH++++N+ D
Sbjct 78 FLKRLRDRIS----PHKIRYFGCGEYGTKLQRPHYHLLIFNYDSLLDG 121
> cpt:CpB0227 hypothetical protein
Length=113
Score = 73.2 bits (178), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 59/99 (60%), Gaps = 6/99 (6%)
Query 68 FLIVPCHKCPLCNEKKAQQWSFRALCESYTSNKQAYFITLTYNNEHLPKNGVFPE-EIQL 126
++++PC KC C + A+ WS+R + E+ K F+TLTY+++HLP+ G + +QL
Sbjct 19 WVLMPCLKCRFCRTQHAKVWSYRCVHEASLYEKNC-FLTLTYDDKHLPQYGSLVKLHLQL 77
Query 127 FFKRLRTKLDRRGISHNLRYIAVSEYGHWSKRPHYHIIL 165
F KRLR + H +RY YG +RPHYH++L
Sbjct 78 FLKRLRKMIS----PHKIRYFECGAYGTKLQRPHYHLLL 112
> cpj:CPj0222 hypothetical protein
Length=113
Score = 73.2 bits (178), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 59/99 (60%), Gaps = 6/99 (6%)
Query 68 FLIVPCHKCPLCNEKKAQQWSFRALCESYTSNKQAYFITLTYNNEHLPKNGVFPE-EIQL 126
++++PC KC C + A+ WS+R + E+ K F+TLTY+++HLP+ G + +QL
Sbjct 19 WVLMPCLKCRFCRTQHAKVWSYRCVHEASLYEKNC-FLTLTYDDKHLPQYGSLVKLHLQL 77
Query 127 FFKRLRTKLDRRGISHNLRYIAVSEYGHWSKRPHYHIIL 165
F KRLR + H +RY YG +RPHYH++L
Sbjct 78 FLKRLRKMIS----PHKIRYFECGAYGTKLQRPHYHLLL 112
> cpa:CP0543 hypothetical protein
Length=113
Score = 73.2 bits (178), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 59/99 (60%), Gaps = 6/99 (6%)
Query 68 FLIVPCHKCPLCNEKKAQQWSFRALCESYTSNKQAYFITLTYNNEHLPKNGVFPE-EIQL 126
++++PC KC C + A+ WS+R + E+ K F+TLTY+++HLP+ G + +QL
Sbjct 19 WVLMPCLKCRFCRTQHAKVWSYRCVHEASLYEKNC-FLTLTYDDKHLPQYGSLVKLHLQL 77
Query 127 FFKRLRTKLDRRGISHNLRYIAVSEYGHWSKRPHYHIIL 165
F KRLR + H +RY YG +RPHYH++L
Sbjct 78 FLKRLRKMIS----PHKIRYFECGAYGTKLQRPHYHLLL 112
> cpn:CPn0222 hypothetical protein
Length=113
Score = 73.2 bits (178), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 59/99 (60%), Gaps = 6/99 (6%)
Query 68 FLIVPCHKCPLCNEKKAQQWSFRALCESYTSNKQAYFITLTYNNEHLPKNGVFPE-EIQL 126
++++PC KC C + A+ WS+R + E+ K F+TLTY+++HLP+ G + +QL
Sbjct 19 WVLMPCLKCRFCRTQHAKVWSYRCVHEASLYEKNC-FLTLTYDDKHLPQYGSLVKLHLQL 77
Query 127 FFKRLRTKLDRRGISHNLRYIAVSEYGHWSKRPHYHIIL 165
F KRLR + H +RY YG +RPHYH++L
Sbjct 78 FLKRLRKMIS----PHKIRYFECGAYGTKLQRPHYHLLL 112
> efd:EFD32_2281 hypothetical protein
Length=271
Score = 43.9 bits (102), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 34/123 (28%), Positives = 62/123 (50%), Gaps = 20/123 (16%)
Query 78 LCNEKKAQQWSFRALCESYTSNKQAYFITLTYNNEHLP---KNGVFPEEIQLFFKRLRTK 134
L N+K++ +W A+ ++ K Y++TLTY+ +P K +++ F +++R
Sbjct 47 LTNDKRSYKWMRLAMNGNFF--KGDYYLTLTYDEGDIPPPEKAEEAKKDLSNFLRKVRNL 104
Query 135 LDRRGISHNLRYIAVSEY-----GHWSKRPHYHIILWNFPDNFDSAYARLTLIESCWCRP 189
+ + L+YI V EY G++ KR H+H+++ N N D+ IE CW
Sbjct 105 YKK--VDKELKYIWVMEYELDQEGNYLKRVHFHLVM-NQGVNRDA-------IEECWSHG 154
Query 190 TGE 192
G+
Sbjct 155 RGK 157
> spe:Spro_1781 hypothetical protein
Length=198
Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 16/86 (19%)
Query 122 EEIQLFFKRLRTKLD----------RRGISHNLRYIAVSEYGHWSKRPHYHIIL------ 165
+E+ F + L+ KL RR + LRY+ V E G + R HYH +L
Sbjct 52 KEVTRFIESLKAKLKVDCQKKNRRWRRNWINQLRYVWVREIGECNHRKHYHALLLLNKDF 111
Query 166 WNFPDNFDSAYARLTLIESCWCRPTG 191
++ FDS + LI+ WC G
Sbjct 112 YHGAGKFDSDDSLAALIQQAWCSAIG 137
> ecm:EcSMS35_4793 hypothetical protein
Length=243
Score = 40.4 bits (93), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 21/66 (32%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Query 128 FKRLRTKLDRRGISHNLRYIAVSEYGHWSKRPHYHIIL------WNFPDNFDSAYARLTL 181
++R + + ++R + LRY E+G R HYH+IL W P +F + TL
Sbjct 69 YQRKKRRANKRVRATTLRYFWCREFGKEKGRKHYHVILLLNKDTWCSPGDFTVPSSLATL 128
Query 182 IESCWC 187
I+ WC
Sbjct 129 IQLAWC 134
> xcp:XCR_2349 filamentous phage phiLf replication initiation
protein II
Length=346
Score = 40.8 bits (94), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 20/93 (22%)
Query 80 NEKKAQQWSFRALCESYTSNKQAYFITLTYNNEHLPKNGVFPEEIQLFFKRLRTKLDR-- 137
++++A++ SFR YF+TLTY + + P ++ FKR+R +R
Sbjct 144 HDQEAKKGSFRGAW---------YFLTLTYRD----GSDSSPRDVSELFKRMRGHFNRLK 190
Query 138 ----RGISHNLRYIAVSEYGHWSKRPHYHIILW 166
R + RY+ V E RPHYH++LW
Sbjct 191 SGRARWNRESFRYVWVGELTQ-RFRPHYHVMLW 222
> xcv:XCV2471 filamentous phage phiLf replication initiation protein
II
Length=346
Score = 40.8 bits (94), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 20/93 (22%)
Query 80 NEKKAQQWSFRALCESYTSNKQAYFITLTYNNEHLPKNGVFPEEIQLFFKRLRTKLDR-- 137
++++A++ SFR YF+TLTY + + P ++ FKR+R +R
Sbjct 144 HDQEAKKGSFRGAW---------YFLTLTYRD----GSDSSPRDVSELFKRMRGHFNRLK 190
Query 138 ----RGISHNLRYIAVSEYGHWSKRPHYHIILW 166
R + RY+ V E RPHYH++LW
Sbjct 191 SGRARWNRESFRYVWVGELTQ-RFRPHYHVMLW 222
> xcb:XC_2107 replication initiation protein
Length=346
Score = 40.4 bits (93), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 20/93 (22%)
Query 80 NEKKAQQWSFRALCESYTSNKQAYFITLTYNNEHLPKNGVFPEEIQLFFKRLRTKLDR-- 137
++++A++ SFR YF+TLTY + + P ++ FKR+R +R
Sbjct 144 HDQEAKKGSFRGAW---------YFLTLTYRD----GSDSSPRDVSELFKRMRGHFNRLK 190
Query 138 ----RGISHNLRYIAVSEYGHWSKRPHYHIILW 166
R + RY+ V E RPHYH++LW
Sbjct 191 SGRARWNRESFRYVWVGELTQ-RFRPHYHVMLW 222
> xcc:XCC2075 gII; replication initiation protein
Length=346
Score = 40.4 bits (93), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 20/93 (22%)
Query 80 NEKKAQQWSFRALCESYTSNKQAYFITLTYNNEHLPKNGVFPEEIQLFFKRLRTKLDR-- 137
++++A++ SFR YF+TLTY + + P ++ FKR+R +R
Sbjct 144 HDQEAKKGSFRGAW---------YFLTLTYRD----GSDSSPRDVSELFKRMRGHFNRLK 190
Query 138 ----RGISHNLRYIAVSEYGHWSKRPHYHIILW 166
R + RY+ V E RPHYH++LW
Sbjct 191 SGRARWNRESFRYVWVGELTQ-RFRPHYHVMLW 222
> xcc:XCC2058 gII; replication initiation protein
Length=346
Score = 40.4 bits (93), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 20/93 (22%)
Query 80 NEKKAQQWSFRALCESYTSNKQAYFITLTYNNEHLPKNGVFPEEIQLFFKRLRTKLDR-- 137
++++A++ SFR YF+TLTY + + P ++ FKR+R +R
Sbjct 144 HDQEAKKGSFRGAW---------YFLTLTYRD----GSDSSPRDVSELFKRMRGHFNRLK 190
Query 138 ----RGISHNLRYIAVSEYGHWSKRPHYHIILW 166
R + RY+ V E RPHYH++LW
Sbjct 191 SGRARWNRESFRYVWVGELTQ-RFRPHYHVMLW 222
> ypb:YPTS_1204 hypothetical protein
Length=194
Score = 39.7 bits (91), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 24/90 (27%), Positives = 42/90 (47%), Gaps = 16/90 (18%)
Query 118 GVFPEEIQLFFKRLRTKLD----------RRGISHNLRYIAVSEYGHWSKRPHYHIIL-- 165
G +E+ F + L+ KL +R ++ LRY+ V E G + R HYH++L
Sbjct 44 GDSNKEVTRFIESLKAKLLVDHQRKNRRWKRNWTNRLRYVWVREVGELNHRKHYHVLLLL 103
Query 166 ----WNFPDNFDSAYARLTLIESCWCRPTG 191
++ N+++ + LI+ WC G
Sbjct 104 NKDFYHGAGNYNADDSLYALIQQAWCSALG 133
> xom:XOO_2146 replication initiation protein
Length=346
Score = 40.4 bits (93), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 20/93 (22%)
Query 80 NEKKAQQWSFRALCESYTSNKQAYFITLTYNNEHLPKNGVFPEEIQLFFKRLRTKLDR-- 137
++++A++ SFR YF+TLTY + + P ++ FKR+R +R
Sbjct 144 HDQEAKKGSFRGAW---------YFLTLTYRD----GSDSSPGDVSELFKRMRGHFNRLK 190
Query 138 ----RGISHNLRYIAVSEYGHWSKRPHYHIILW 166
R + RY+ V E RPHYH++LW
Sbjct 191 SGRARWNRESFRYVWVGELTQ-RFRPHYHVMLW 222
> ecz:ECS88_4652 hypothetical protein
Length=243
Score = 40.0 bits (92), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 21/66 (32%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Query 128 FKRLRTKLDRRGISHNLRYIAVSEYGHWSKRPHYHIIL------WNFPDNFDSAYARLTL 181
++R + + ++R + LRY E+G R HYH+IL W P +F + TL
Sbjct 69 YQRHKRRANKRVRATTLRYFWCREFGKEKGRKHYHVILLLNKDTWCSPGDFTVPSSLATL 128
Query 182 IESCWC 187
I+ WC
Sbjct 129 IQLAWC 134
> ecq:ECED1_3481 hypothetical protein
Length=243
Score = 40.0 bits (92), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 21/66 (32%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Query 128 FKRLRTKLDRRGISHNLRYIAVSEYGHWSKRPHYHIIL------WNFPDNFDSAYARLTL 181
++R + + ++R + LRY E+G R HYH+IL W P +F + TL
Sbjct 69 YQRHKRRANKRVRATTLRYFWCREFGKEKGRKHYHVILLLNKDTWCSPGDFTVPSSLATL 128
Query 182 IESCWC 187
I+ WC
Sbjct 129 IQLAWC 134
> ecv:APECO1_2309 hypothetical protein
Length=243
Score = 40.0 bits (92), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 21/66 (32%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Query 128 FKRLRTKLDRRGISHNLRYIAVSEYGHWSKRPHYHIIL------WNFPDNFDSAYARLTL 181
++R + + ++R + LRY E+G R HYH+IL W P +F + TL
Sbjct 69 YQRHKRRANKRVRATTLRYFWCREFGKEKGRKHYHVILLLNKDTWCSPGDFTVPSSLATL 128
Query 182 IESCWC 187
I+ WC
Sbjct 129 IQLAWC 134
> ecc:c4558 hypothetical protein
Length=243
Score = 40.0 bits (92), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 21/66 (32%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Query 128 FKRLRTKLDRRGISHNLRYIAVSEYGHWSKRPHYHIIL------WNFPDNFDSAYARLTL 181
++R + + ++R + LRY E+G R HYH+IL W P +F + TL
Sbjct 69 YQRHKRRANKRVRATTLRYFWCREFGKEKGRKHYHVILLLNKDTWCSPGDFTVPSSLATL 128
Query 182 IESCWC 187
I+ WC
Sbjct 129 IQLAWC 134
> senn:SN31241_6720 Intergenic-region protein
Length=243
Score = 39.7 bits (91), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 21/66 (32%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Query 128 FKRLRTKLDRRGISHNLRYIAVSEYGHWSKRPHYHIIL------WNFPDNFDSAYARLTL 181
++R + + ++R + LRY E+G R HYH+IL W P +F + TL
Sbjct 69 YQRHKRRANKRVRATTLRYFWCREFGKEKGRKHYHVILLLNKDTWCSPGDFTVPSSLATL 128
Query 182 IESCWC 187
I+ WC
Sbjct 129 IKLAWC 134
> rus:RBI_I01590 hypothetical phage protein
Length=271
Score = 39.7 bits (91), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 37/62 (60%), Gaps = 2/62 (3%)
Query 105 ITLTYNNEHLPKNG-VFPEEIQLFFKRLRTKLDRRGISHNLRYIAVSEYGHWSKRPHYHI 163
I LTYN +HLP N ++ + F RL+ + G+ +L+Y++V+E G + R H+H
Sbjct 69 IHLTYNGDHLPGNDEAVKKQFRNFIARLKRYRKKHGLP-SLKYMSVTERGSRNGRYHHHT 127
Query 164 IL 165
I+
Sbjct 128 IV 129
> eck:EC55989_4880 hypothetical protein
Length=243
Score = 39.3 bits (90), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 42/96 (44%), Gaps = 20/96 (21%)
Query 112 EHLPKNGVFPEE----IQLFFKRLRTKL----------DRRGISHNLRYIAVSEYGHWSK 157
EH+P + P+ I FF+ L+ K+ ++R + L Y E+G
Sbjct 39 EHMPVTIMDPDPDSAVISRFFESLKAKIQAYQRKKRRTNKRVRATTLHYFWCREFGKEKG 98
Query 158 RPHYHIIL------WNFPDNFDSAYARLTLIESCWC 187
R HYH+IL W P +F + TLI+ WC
Sbjct 99 RKHYHVILLLNKDTWCSPGDFTVPSSLATLIQLAWC 134
> vfu:vfu_A02526 phage protein
Length=967
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/101 (35%), Positives = 50/101 (50%), Gaps = 24/101 (24%)
Query 91 ALCESYTS-----NKQAYFITLT----YNNEH-----LPK-NGVFPEEIQLF----FKRL 131
A C Y N Q F+TLT Y+N + +P NG P++ Q + ++R+
Sbjct 373 ARCRGYEDIGSLLNLQGMFLTLTAPGKYHNSYQSGGFIPHWNGASPKQTQGYLNNVWQRI 432
Query 132 RTKLDRRGIS-HNLRYIAVSEYGHWSKRPHYHIILWNFPDN 171
R KLDR GI LR V+E H PH+H++LW P +
Sbjct 433 RAKLDREGIRWFGLR---VAEPHH-DGTPHWHLLLWVRPQD 469
> ear:ST548_p3284 FIG00947185: hypothetical protein
Length=194
Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 44/99 (44%), Gaps = 25/99 (25%)
Query 115 PKN---GVFPEEIQLFFKRLRTKL----------DRRGISHNLRYIAVSEYGHWSKRPHY 161
P+N G +E+ F + L+ KL +R S+ LRY V E G ++R HY
Sbjct 38 PRNYQYGDSNKEVTRFIESLKAKLLVDCQRKNRRWKRNRSNRLRYAWVREVGELNRRKHY 97
Query 162 HIILWNFPDNF---------DSAYARLTLIESCWCRPTG 191
H++L D + DS YA LI+ WC G
Sbjct 98 HVLLLLNKDFYHGVGSYNADDSLYA---LIQQAWCSALG 133
> sri:SELR_11130 hypothetical protein
Length=288
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/87 (30%), Positives = 53/87 (61%), Gaps = 4/87 (5%)
Query 80 NEKKAQQWSFRALCESYTSNKQAYFITLTYNNEHLPKN-GVFPEEIQLFFKRLRTKLDRR 138
NEK+++++ F AL S +K +T+TY++E+ P + + + ++ + +RL +
Sbjct 54 NEKRSKRY-FEALVLS-NFHKDDLHVTVTYDDENRPADLKMAMKAVENYIRRLNYTRSKA 111
Query 139 GISHNLRYIAVSEYGHWSKRPHYHIIL 165
G+S ++RY+ V+E G + R H+H I+
Sbjct 112 GLS-SVRYVCVTEEGATNGRIHHHFIM 137
> pmr:PMI3479 hypothetical protein
Length=195
Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/69 (32%), Positives = 30/69 (43%), Gaps = 7/69 (10%)
Query 130 RLRTKLDRRGISHNLRYIAVSEYGHWSKRPHYHIIL-------WNFPDNFDSAYARLTLI 182
R + K+ R S L Y+ V E+G S R HYH++L W D + LI
Sbjct 67 RRKNKVWARNYSCPLSYVWVREFGEISSRKHYHLLLLVNKDVYWGLGDYTKTEGTLYALI 126
Query 183 ESCWCRPTG 191
+ WC G
Sbjct 127 QQAWCSAIG 135
> cca:CCA00722 hypothetical protein
Length=117
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/61 (33%), Positives = 34/61 (56%), Gaps = 2/61 (3%)
Query 72 PCHKCPLCNEKKAQQWSFRALCESYTSNKQAYFITLTYNNEHLPKNG-VFPEEIQLFFKR 130
P HK + A+ WS+R + E+ + Q F+TLTY + +LP+ G + +++LF R
Sbjct 31 PMHKNEVLVHGSAKVWSYRCIHEA-SLYGQNSFLTLTYEDRNLPEKGSLVRRDVRLFLMR 89
Query 131 L 131
Sbjct 90 F 90
> pse:NH8B_2279 putative phage replication protein
Length=351
Score = 38.5 bits (88), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 49/109 (45%), Gaps = 9/109 (8%)
Query 61 TGETFPMFLIVPCHKCPLCNEKKAQQWSFRALCESYTSNK---QAYFITLTYNNEHLPKN 117
T T + +V + L K+A S R E+ T ++ +TLTY ++
Sbjct 47 TSATQDGWHLVDAQRARLKRMKQAVITSGRLHQENATRRGFLTKSAMLTLTYRDD----V 102
Query 118 GVFPEEIQLFFKRLRTKLDRRGISHNLRYIAVSEYGHWSKRPHYHIILW 166
P + +RLR L RRG+ RY+ V E RPHYH+I+W
Sbjct 103 EWSPRHVSDLLERLRKWLKRRGVK-ACRYVWVLELTK-RGRPHYHLIVW 149
> plm:Plim_2985 hypothetical protein
Length=1173
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 60/150 (40%), Gaps = 21/150 (14%)
Query 138 RGISHNLRYIAVSEYGHWSKRPHYHIILWNFPD-------NFDSAYARLTLIESCWCRPT 190
+GI N R A+++ W +H N D NF + R ++ W
Sbjct 467 KGIEVNPRAAAIADLVLWIGYLQWHTRTRNLDDISEPIIQNFHNIECRDAVL--AWDAIE 524
Query 191 GEYNSDGSPVTRSIGFAYCL-PVI------DGGINYVMKYMGKREKS-PEGM----NPTF 238
+ G PVTR G PV D V+KY+ R+ P+ NP F
Sbjct 525 EVRDEHGQPVTRWDGRTMKKHPVTGEDVPDDTARVPVVKYINPRKAEWPKAEYIVGNPPF 584
Query 239 MLASRKNGGIGSAYAEQLRPFYEQQPDTCD 268
+ SR +G YAE +R Y + P+TCD
Sbjct 585 IGNSRMRHALGDGYAECIRQTYNRLPETCD 614
> elh:ETEC_3936 hypothetical protein
Length=243
Score = 37.7 bits (86), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 6/66 (9%)
Query 128 FKRLRTKLDRRGISHNLRYIAVSEYGHWSKRPHYHIIL------WNFPDNFDSAYARLTL 181
++R + + ++R + L Y E+G R HYH+IL W P +F + TL
Sbjct 69 YQRHKRRANKRVRATTLHYFWCREFGKEKGRKHYHVILLLNKDTWCSPGDFTVPSSLATL 128
Query 182 IESCWC 187
I+ WC
Sbjct 129 IQLAWC 134
> gap:GAPWK_1390 Phage replication protein
Length=717
Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 85/236 (36%), Gaps = 40/236 (17%)
Query 14 HPHASKLVQKYRTFTMPSGTYHGSVLHVNKNHVNKNNIDKYTIVNPVTGETFPMFLIV-- 71
H H + V + + P + + + N+ ++K I N TGE P+ L V
Sbjct 252 HEHFAIAVGQVQKKASPYASRSCQMQWQEQKRRNQKYLEKMAIENQETGEQLPLELQVYK 311
Query 72 -----PCHKCPLCNEKKAQQWSFRALCESYTSNKQAYFITLT----YNNEHLPKN----- 117
+ L + F L + Q FITLT Y++ H
Sbjct 312 SVANPAIRRVELMTRMRG----FEDLADQL--GYQGAFITLTAPAKYHSTHAKGGFVENW 365
Query 118 -GVFPEEIQLF----FKRLRTKLDRRGISHNLRYIA--VSEYGHWSKRPHYHIILWNFPD 170
G P E Q + + R+R KL+R N+++ V+E H PH+HI+++ P+
Sbjct 366 QGNTPRETQAYLCKVWSRIRAKLNR----ENIQFFGFRVAEPHH-DGTPHWHILIFMRPE 420
Query 171 NFDSAYARLTLIESCWCRPTGEYNSDGSPVTRSIGFAYCLPVIDGGINYVMKYMGK 226
+ A+ S W E + F Y+ KY+ K
Sbjct 421 DIQKAFY------SMWIYAMDEDGDEKGAAINRFEFKDIDKQKGSATGYIAKYIAK 470
> eab:ECABU_c49190 hypothetical protein
Length=243
Score = 37.4 bits (85), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 6/66 (9%)
Query 128 FKRLRTKLDRRGISHNLRYIAVSEYGHWSKRPHYHIIL------WNFPDNFDSAYARLTL 181
++R + + ++R + L Y E+G R HYH+IL W P +F + TL
Sbjct 69 YQRHKRRANKRVRATTLHYFWCREFGKEKGRKHYHVILLLNKDTWCSPGDFTVPSSLATL 128
Query 182 IESCWC 187
I+ WC
Sbjct 129 IQLAWC 134
> mmk:MU9_127 transposase
Length=195
Score = 37.0 bits (84), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 35/85 (41%), Gaps = 17/85 (20%)
Query 124 IQLFFKRLRTKLDR----------RGISHNLRYIAVSEYGHWSKRPHYHIIL-------W 166
I F + L+ K+D R S L Y+ V E+G S R HYH++L W
Sbjct 51 ITRFIESLKAKIDADLKRKNKVWDRNYSCPLSYVWVREFGEISCRKHYHLLLLVNKDVYW 110
Query 167 NFPDNFDSAYARLTLIESCWCRPTG 191
+ D + LI+ WC G
Sbjct 111 SLGDYTRTEGTLYALIQQAWCSAIG 135
> sauy:SAI8T7_1001590 M23 family peptidase
Length=196
Score = 37.0 bits (84), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 3/46 (7%)
Query 220 VMKYMGKREKSPEGMNPTFMLASRKNGGIGSAYAEQLRPFYEQQPD 265
++ Y G K G + F R GG+G+AYAE +PF EQ PD
Sbjct 146 IIAYSGNTGKQTTGAHLHF---QRMKGGVGNAYAEDPKPFIEQLPD 188
> saux:SAI6T6_1001590 M23 family peptidase
Length=196
Score = 37.0 bits (84), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 3/46 (7%)
Query 220 VMKYMGKREKSPEGMNPTFMLASRKNGGIGSAYAEQLRPFYEQQPD 265
++ Y G K G + F R GG+G+AYAE +PF EQ PD
Sbjct 146 IIAYSGNTGKQTTGAHLHF---QRMKGGVGNAYAEDPKPFIEQLPD 188
> sauw:SAI5S5_1001580 M23 family peptidase
Length=196
Score = 37.0 bits (84), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 3/46 (7%)
Query 220 VMKYMGKREKSPEGMNPTFMLASRKNGGIGSAYAEQLRPFYEQQPD 265
++ Y G K G + F R GG+G+AYAE +PF EQ PD
Sbjct 146 IIAYSGNTGKQTTGAHLHF---QRMKGGVGNAYAEDPKPFIEQLPD 188
> sauv:SAI7S6_1001590 M23 family peptidase
Length=196
Score = 37.0 bits (84), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 3/46 (7%)
Query 220 VMKYMGKREKSPEGMNPTFMLASRKNGGIGSAYAEQLRPFYEQQPD 265
++ Y G K G + F R GG+G+AYAE +PF EQ PD
Sbjct 146 IIAYSGNTGKQTTGAHLHF---QRMKGGVGNAYAEDPKPFIEQLPD 188
> sauq:SAI4T8_1001590 M23 family peptidase
Length=196
Score = 37.0 bits (84), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 3/46 (7%)
Query 220 VMKYMGKREKSPEGMNPTFMLASRKNGGIGSAYAEQLRPFYEQQPD 265
++ Y G K G + F R GG+G+AYAE +PF EQ PD
Sbjct 146 IIAYSGNTGKQTTGAHLHF---QRMKGGVGNAYAEDPKPFIEQLPD 188
> sauk:SAI3T3_1001590 M23 family peptidase
Length=196
Score = 37.0 bits (84), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 3/46 (7%)
Query 220 VMKYMGKREKSPEGMNPTFMLASRKNGGIGSAYAEQLRPFYEQQPD 265
++ Y G K G + F R GG+G+AYAE +PF EQ PD
Sbjct 146 IIAYSGNTGKQTTGAHLHF---QRMKGGVGNAYAEDPKPFIEQLPD 188
> sauj:SAI2T2_1001590 M23 family peptidase
Length=196
Score = 37.0 bits (84), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 3/46 (7%)
Query 220 VMKYMGKREKSPEGMNPTFMLASRKNGGIGSAYAEQLRPFYEQQPD 265
++ Y G K G + F R GG+G+AYAE +PF EQ PD
Sbjct 146 IIAYSGNTGKQTTGAHLHF---QRMKGGVGNAYAEDPKPFIEQLPD 188
> saut:SAI1T1_2001590 M23 family peptidase
Length=196
Score = 37.0 bits (84), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 3/46 (7%)
Query 220 VMKYMGKREKSPEGMNPTFMLASRKNGGIGSAYAEQLRPFYEQQPD 265
++ Y G K G + F R GG+G+AYAE +PF EQ PD
Sbjct 146 IIAYSGNTGKQTTGAHLHF---QRMKGGVGNAYAEDPKPFIEQLPD 188
> suy:SA2981_0213 M23/M37 peptidase domain protein
Length=192
Score = 37.0 bits (84), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 3/46 (7%)
Query 220 VMKYMGKREKSPEGMNPTFMLASRKNGGIGSAYAEQLRPFYEQQPD 265
++ Y G K G + F R GG+G+AYAE +PF EQ PD
Sbjct 142 IIAYSGNTGKQTTGAHLHF---QRMKGGVGNAYAEDPKPFIEQLPD 184
> suc:ECTR2_173 peptidase family M23 family protein
Length=192
Score = 37.0 bits (84), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 3/46 (7%)
Query 220 VMKYMGKREKSPEGMNPTFMLASRKNGGIGSAYAEQLRPFYEQQPD 265
++ Y G K G + F R GG+G+AYAE +PF EQ PD
Sbjct 142 IIAYSGNTGKQTTGAHLHF---QRMKGGVGNAYAEDPKPFIEQLPD 184
> sad:SAAV_0178 M23/M37 peptidase domain-containing protein
Length=192
Score = 37.0 bits (84), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 3/46 (7%)
Query 220 VMKYMGKREKSPEGMNPTFMLASRKNGGIGSAYAEQLRPFYEQQPD 265
++ Y G K G + F R GG+G+AYAE +PF EQ PD
Sbjct 142 IIAYSGNTGKQTTGAHLHF---QRMKGGVGNAYAEDPKPFIEQLPD 184
> saj:SaurJH9_0197 peptidase M23B
Length=192
Score = 37.0 bits (84), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 3/46 (7%)
Query 220 VMKYMGKREKSPEGMNPTFMLASRKNGGIGSAYAEQLRPFYEQQPD 265
++ Y G K G + F R GG+G+AYAE +PF EQ PD
Sbjct 142 IIAYSGNTGKQTTGAHLHF---QRMKGGVGNAYAEDPKPFIEQLPD 184
> sah:SaurJH1_0203 peptidase M23B
Length=192
Score = 37.0 bits (84), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 3/46 (7%)
Query 220 VMKYMGKREKSPEGMNPTFMLASRKNGGIGSAYAEQLRPFYEQQPD 265
++ Y G K G + F R GG+G+AYAE +PF EQ PD
Sbjct 142 IIAYSGNTGKQTTGAHLHF---QRMKGGVGNAYAEDPKPFIEQLPD 184
> saw:SAHV_0211 hypothetical protein
Length=192
Score = 37.0 bits (84), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 3/46 (7%)
Query 220 VMKYMGKREKSPEGMNPTFMLASRKNGGIGSAYAEQLRPFYEQQPD 265
++ Y G K G + F R GG+G+AYAE +PF EQ PD
Sbjct 142 IIAYSGNTGKQTTGAHLHF---QRMKGGVGNAYAEDPKPFIEQLPD 184
> sav:SAV0212 hypothetical protein
Length=192
Score = 37.0 bits (84), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 3/46 (7%)
Query 220 VMKYMGKREKSPEGMNPTFMLASRKNGGIGSAYAEQLRPFYEQQPD 265
++ Y G K G + F R GG+G+AYAE +PF EQ PD
Sbjct 142 IIAYSGNTGKQTTGAHLHF---QRMKGGVGNAYAEDPKPFIEQLPD 184
> sau:SA0205 hypothetical protein
Length=192
Score = 37.0 bits (84), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 3/46 (7%)
Query 220 VMKYMGKREKSPEGMNPTFMLASRKNGGIGSAYAEQLRPFYEQQPD 265
++ Y G K G + F R GG+G+AYAE +PF EQ PD
Sbjct 142 IIAYSGNTGKQTTGAHLHF---QRMKGGVGNAYAEDPKPFIEQLPD 184
> amg:AMEC673_10165 prophage
Length=232
Score = 37.4 bits (85), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
Query 128 FKR-LRTKLDRRGISH--NLRYIAVSEYGHWSKRPHYHIILW 166
FKR LR LD G+SH +L+Y+A EY + PHYH+ ++
Sbjct 84 FKRHLRASLDSLGLSHKHSLKYVAAREYDRFVNIPHYHVAIF 125
Lambda K H a alpha
0.322 0.137 0.436 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 867951345240