bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: all_orgs
14,240,465 sequences; 5,121,972,263 total letters
Query= Contig-3_CDS_annotation_glimmer3.pl_2_3
Length=515
Score E
Sequences producing significant alignments: (Bits) Value
clp:CPK_ORF00729 hypothetical protein 38.1 0.96
stu:STH8232_0109 hypothetical protein 38.9 1.0
stw:Y1U_C0064 hypothetical protein 38.9 1.0
ste:STER_0100 hypothetical protein 38.9 1.0
stl:stu0066 hypothetical protein 38.9 1.0
stc:str0066 hypothetical protein 38.9 1.0
stj:SALIVA_0090 flavoprotein 38.9 1.3
ssr:SALIVB_0097 Oxidoreductase (EC:1.1.1.-) 38.5 1.4
ial:IALB_0426 hypothetical protein 38.9 2.1
sbi:SORBI_05g027415 SORBIDRAFT_05g027415, Sb05g027415; hypothe... 38.1 4.6
> clp:CPK_ORF00729 hypothetical protein
Length=121
Score = 38.1 bits (87), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 22/46 (48%), Positives = 28/46 (61%), Gaps = 4/46 (9%)
Query 146 IQRFIKRFRIYAKRKFNASCRYYVVGEYGTNSLRPHWHLLLF-FDS 190
+Q F+KR R R RY+ GEYGT RPH+HLL+F +DS
Sbjct 75 LQLFLKRLR---DRISPHKIRYFGCGEYGTKLQRPHYHLLIFNYDS 117
> stu:STH8232_0109 hypothetical protein
Length=181
Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 42/102 (41%), Gaps = 14/102 (14%)
Query 377 TIPSPIADVLLNLQSTFDLSEHCLHPEDFSALHDVLYASKRFCWLCSWLNMSHKQYFEIW 436
+IP P+ ++L L DLS+ P SAL D + + S N H Q F+ +
Sbjct 80 SIPGPVKNLLDWLSRALDLSD----PSGPSALQD------KIVTVSSVANGGHNQLFDAY 129
Query 437 SNFYKYINLSLYKEHYLALENDSKYFRGWFDRRFITPTAVLE 478
+I + + ND+ W D +F+ VLE
Sbjct 130 KELLPFIRTQVVGDFTATRVNDT----AWVDGKFVVTEEVLE 167
> stw:Y1U_C0064 hypothetical protein
Length=183
Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 42/102 (41%), Gaps = 14/102 (14%)
Query 377 TIPSPIADVLLNLQSTFDLSEHCLHPEDFSALHDVLYASKRFCWLCSWLNMSHKQYFEIW 436
+IP P+ ++L L DLS+ P SAL D + + S N H Q F+ +
Sbjct 80 SIPGPVKNLLDWLSRALDLSD----PSGPSALQD------KIVTVSSVANGGHNQLFDAY 129
Query 437 SNFYKYINLSLYKEHYLALENDSKYFRGWFDRRFITPTAVLE 478
+I + + ND+ W D +F+ VLE
Sbjct 130 KELLPFIRTQVVGDFTATRVNDT----AWVDGKFVVTEEVLE 167
> ste:STER_0100 hypothetical protein
Length=183
Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 42/102 (41%), Gaps = 14/102 (14%)
Query 377 TIPSPIADVLLNLQSTFDLSEHCLHPEDFSALHDVLYASKRFCWLCSWLNMSHKQYFEIW 436
+IP P+ ++L L DLS+ P SAL D + + S N H Q F+ +
Sbjct 80 SIPGPVKNLLDWLSRALDLSD----PSGPSALQD------KIVTVSSVANGGHNQLFDAY 129
Query 437 SNFYKYINLSLYKEHYLALENDSKYFRGWFDRRFITPTAVLE 478
+I + + ND+ W D +F+ VLE
Sbjct 130 KELLPFIRTQVVGDFTATRVNDT----AWVDGKFVVTEEVLE 167
> stl:stu0066 hypothetical protein
Length=183
Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 42/102 (41%), Gaps = 14/102 (14%)
Query 377 TIPSPIADVLLNLQSTFDLSEHCLHPEDFSALHDVLYASKRFCWLCSWLNMSHKQYFEIW 436
+IP P+ ++L L DLS+ P SAL D + + S N H Q F+ +
Sbjct 80 SIPGPVKNLLDWLSRALDLSD----PSGPSALQD------KIVTVSSVANGGHNQLFDAY 129
Query 437 SNFYKYINLSLYKEHYLALENDSKYFRGWFDRRFITPTAVLE 478
+I + + ND+ W D +F+ VLE
Sbjct 130 KELLPFIRTQVVGDFTATRVNDT----AWVDGKFVVTEEVLE 167
> stc:str0066 hypothetical protein
Length=183
Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 42/102 (41%), Gaps = 14/102 (14%)
Query 377 TIPSPIADVLLNLQSTFDLSEHCLHPEDFSALHDVLYASKRFCWLCSWLNMSHKQYFEIW 436
+IP P+ ++L L DLS+ P SAL D + + S N H Q F+ +
Sbjct 80 SIPGPVKNLLDWLSRALDLSD----PSGPSALQD------KIVTVSSVANGGHNQLFDAY 129
Query 437 SNFYKYINLSLYKEHYLALENDSKYFRGWFDRRFITPTAVLE 478
+I + + ND+ W D +F+ VLE
Sbjct 130 KELLPFIRTQVVGDFTATRVNDT----AWVDGKFVVTEEVLE 167
> stj:SALIVA_0090 flavoprotein
Length=181
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 43/102 (42%), Gaps = 14/102 (14%)
Query 377 TIPSPIADVLLNLQSTFDLSEHCLHPEDFSALHDVLYASKRFCWLCSWLNMSHKQYFEIW 436
+IP P+ ++L L DLS+ P SAL D + + S N H Q F+ +
Sbjct 80 SIPGPVKNLLDWLSRALDLSD----PSGPSALQD------KIVTVSSVANGGHNQLFDAY 129
Query 437 SNFYKYINLSLYKEHYLALENDSKYFRGWFDRRFITPTAVLE 478
+ +I + + ND+ W D +F+ VLE
Sbjct 130 KDLLPFIRTQVVGDFTATRVNDT----AWADGKFLATEEVLE 167
> ssr:SALIVB_0097 Oxidoreductase (EC:1.1.1.-)
Length=181
Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 43/102 (42%), Gaps = 14/102 (14%)
Query 377 TIPSPIADVLLNLQSTFDLSEHCLHPEDFSALHDVLYASKRFCWLCSWLNMSHKQYFEIW 436
+IP P+ ++L L DLS+ P SAL D + + S N H Q F+ +
Sbjct 80 SIPGPVKNLLDWLSRALDLSD----PSGPSALQD------KIVTVSSVANGGHNQLFDAY 129
Query 437 SNFYKYINLSLYKEHYLALENDSKYFRGWFDRRFITPTAVLE 478
+ +I + + ND+ W D +F+ VLE
Sbjct 130 KDLLPFIRTQVVGDFTATRVNDT----AWADGKFLATEEVLE 167
> ial:IALB_0426 hypothetical protein
Length=360
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 36/134 (27%), Positives = 60/134 (45%), Gaps = 7/134 (5%)
Query 171 GEYGTNSLRPHWHLLLFFDSDELAQDLERCYHPTDKELRK----DPDLRFYNDHDCAECL 226
GE G + + L L F D++ DL ++ DK +K D L+F N+ + E
Sbjct 41 GELGQGK-QFSFGLPLIFTPDDIEIDLTNNFYICDKFSKKIFKYDSSLKFINEINIPEEK 99
Query 227 RTLWKFGFATSERTNKSAYYYVSGYV-TSTSRFPLCLSALSRPHSLHSRFFGQTLAEEEI 285
R+ W G ++ + N Y+ + V T T+ F L L +G+ L E EI
Sbjct 100 RS-WNKGNRSNNKINNELYFEIDMEVDTETNLFVLVKRRSFFERLLKFDKYGKFLKEFEI 158
Query 286 QRAIVSQDFEYFRV 299
Q + ++ + FR+
Sbjct 159 QELLTNRRIDGFRI 172
> sbi:SORBI_05g027415 SORBIDRAFT_05g027415, Sb05g027415; hypothetical
protein
Length=513
Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 32/87 (37%), Positives = 47/87 (54%), Gaps = 7/87 (8%)
Query 94 DKYFEPY-IVDYDVDLEKSIGQLC--EQRDEYSRLYSRSHKFVPHDVIYLLHYPDI--QR 148
DK+F+PY I + L+K +G LC +Q E++ + +H+F + LLH+P I Q
Sbjct 169 DKFFQPYRIQQQRIMLDKHMGILCHGDQGGEFT-VADLTHRFRTEVHLCLLHHPPIQCQW 227
Query 149 FIKRFRIYAKRKFN-ASCRYYVVGEYG 174
IKR +I K N +S R VV G
Sbjct 228 SIKRLQIPPDMKINISSWRNDVVVPIG 254
Lambda K H a alpha
0.325 0.140 0.451 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 1139469107413