bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: all_orgs
           14,240,465 sequences; 5,121,972,263 total letters



Query= Contig-4_CDS_annotation_glimmer3.pl_2_1

Length=155
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  xtr:100489162  lamc2; laminin, gamma 2                              38.5
  fve:101297601  minor spike protein H-like                           35.8    1.3


> xtr:100489162  lamc2; laminin, gamma 2
Length=1172

 Score = 38.5 bits (88),  Expect = 0.41, Method: Composition-based stats.
 Identities = 34/106 (32%), Positives = 48/106 (45%), Gaps = 12/106 (11%)

Query  45   AEKARQFQLDMWNKTNEYNSASAQRSRLEEAGLNPYLMMNGGSAGTAQSSGSSTPASASS  104
            + K   ++  +   T E N  S  R  LEE        M    A  AQ     + A+  +
Sbjct  612  STKLNLYKRQLLKLTGENNGQSPARGELEE-------RMRKAEAA-AQGLQRDSEAANGA  663

Query  105  PLSMQRQDFSGLSNTLASALQISNQTKETNANVQTLQSQKSLYDAQ  150
             LS+QRQ FSGL  T +    + +Q KE    +Q LQ+QK+ Y  Q
Sbjct  664  ALSLQRQ-FSGLQGTQSDTQNVLDQAKE---KLQGLQTQKNQYQGQ  705


> fve:101297601  minor spike protein H-like
Length=139

 Score = 35.8 bits (81),  Expect = 1.3, Method: Compositional matrix adjust.
 Identities = 27/82 (33%), Positives = 44/82 (54%), Gaps = 7/82 (9%)

Query  27   NNANMAVNRMNNEFNAAEAEKARQFQLDMWNKTNEYNSASAQRSRLEEAGLNPYL--MMN  84
            N  N A+   + E + AEA++ R+FQ  + N     ++   Q + L  AGLNP L  +  
Sbjct  8    NATNEAIANQSTETSMAEAQRNREFQERLSN-----SAYQRQVADLSSAGLNPMLAYIKG  62

Query  85   GGSAGTAQSSGSSTPASASSPL  106
            GG++  + S+G  T A  +SP+
Sbjct  63   GGASTPSGSTGQVTSAQYTSPI  84



Lambda      K        H        a         alpha
   0.306    0.118    0.310    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 127339103541