bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: all_orgs
14,240,465 sequences; 5,121,972,263 total letters
Query= Contig-4_CDS_annotation_glimmer3.pl_2_4
Length=566
Score E
Sequences producing significant alignments: (Bits) Value
mmk:MU9_2817 hypothetical protein 45.1 0.043
raq:Rahaq2_0757 Bacteriophage replication gene A protein (GPA) 44.3 0.077
raa:Q7S_03365 replication protein A 43.9 0.083
rah:Rahaq_0726 replication protein A 43.9 0.083
ecm:EcSMS35_4315 replication gene A protein 43.5 0.12
clp:CPK_ORF00729 hypothetical protein 40.0 0.24
enr:H650_11925 replication protein 42.4 0.27
ecol:LY180_10875 replication protein 42.4 0.31
ell:WFL_11150 gpA; putative phage replication initiation protein 42.4 0.31
elw:ECW_m2279 gpA2; DNA replication protein 42.4 0.31
ekf:KO11_12225 gpA; putative phage replication initiation protein 42.4 0.31
eko:EKO11_1676 replication protein A 42.4 0.31
etw:ECSP_2873 phage replication initiation protein 42.4 0.32
ecf:ECH74115_3058 bacteriophage replication gene A protein 42.4 0.32
ebr:ECB_02004 Replication gene A protein 42.4 0.34
ecoh:ECRM13516_2705 Phage replication protein 42.0 0.35
seeh:SEEH1578_06395 replication protein 42.0 0.36
ssj:SSON53_23505 replication protein A 42.0 0.37
ecz:ECS88_2220 Replication gene A protein (GpA) 42.0 0.38
ecoa:APECO78_08335 replication protein A 42.0 0.39
ecoo:ECRM13514_4992 Replication gene A protein 42.0 0.39
ecv:APECO1_1184 gpA; Phage protein A 42.0 0.41
sey:SL1344_2641 putative bacteriophage replication protein 42.0 0.42
sef:UMN798_2889 bacteriophage replication protein 42.0 0.43
seb:STM474_2794 hypothetical protein 42.0 0.43
ecol:LY180_20360 replication protein 41.6 0.52
ell:WFL_20630 Replication gene A protein (GpA) 41.6 0.52
elw:ECW_m4232 gpA1; replication gene A protein 41.6 0.52
ekf:KO11_02960 Phage protein A 41.6 0.52
eko:EKO11_4433 replication protein A 41.6 0.52
sbz:A464_2745 Phage replication protein 41.6 0.52
kok:KONIH1_00500 replication protein 41.6 0.52
pmr:PMI1997 phage replication protein 41.6 0.53
ent:Ent638_3505 bacteriophage replication gene A 41.6 0.56
ena:ECNA114_4023 Putative phage replication protein 41.2 0.59
kpn:KPN_04887 putative prophage protein 41.2 0.60
hif:HIBPF01220 bacteriophage replication gene a 41.2 0.62
kok:KONIH1_21995 replication protein 41.2 0.66
kpm:KPHS_40100 gp36 41.2 0.69
csi:P262_01289 A protein 41.2 0.73
kpz:KPNIH27_08145 replication protein A 41.2 0.73
amg:AMEC673_00400 replication protein A 40.4 0.94
kln:LH22_05105 replication protein 40.8 1.00
eih:ECOK1_0937 gpA; replication gene A protein 40.4 1.0
senj:CFSAN001992_20250 Replication protein GpA 40.0 1.3
vex:VEA_003288 replication protein 40.0 1.3
seen:SE451236_19665 replication protein 40.0 1.5
sev:STMMW_32051 bacteriophage replication protein 40.0 1.5
sbg:SBG_2836 gpA; bacteriophage replication protein 40.0 1.5
yel:LC20_00404 ndoA; putative replication endonuclease from pr... 40.0 1.5
> mmk:MU9_2817 hypothetical protein
Length=770
Score = 45.1 bits (105), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 27/80 (34%), Positives = 38/80 (48%), Gaps = 16/80 (20%)
Query 189 YGVSEYGPRTYRPH------WHLLLFFNSDELTSVI-----QQFVSESWSYG----RTTC 233
YG+ YG R PH WHLLLF + VI + + G R C
Sbjct 365 YGLKVYGVRVVEPHHDGTPHWHLLLFTDKASRAQVIDIMRKKALAVDGKEQGAQKHRFKC 424
Query 234 E-LSRGGSSSYVASYVNSNV 252
E ++RGG+ SY+A Y++ N+
Sbjct 425 EHMNRGGAVSYIAKYISKNI 444
> raq:Rahaq2_0757 Bacteriophage replication gene A protein (GPA)
Length=642
Score = 44.3 bits (103), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 51/99 (52%), Gaps = 12/99 (12%)
Query 166 DCQKFLKRLRFHSKNKYNEE-IRFYGVSEYGPR-TYRPHWHLLLFFNSDE---LTSVIQQ 220
D Q++L + + + + ++ YGV P PHWH++LF D+ +T V+++
Sbjct 364 DAQRYLVAVWAKIRTTFKDRNLKVYGVRVVEPHHDGTPHWHMMLFTPPDQQQKVTEVMRR 423
Query 221 FVSE------SWSYGRTTCE-LSRGGSSSYVASYVNSNV 252
+ E + R C+ L+RGG++ Y+A YV N+
Sbjct 424 YALEEDPDEPGAAESRFNCKPLNRGGAAGYIAKYVAKNI 462
> raa:Q7S_03365 replication protein A
Length=630
Score = 43.9 bits (102), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 51/99 (52%), Gaps = 12/99 (12%)
Query 166 DCQKFLKRLRFHSKNKYNEE-IRFYGVSEYGPR-TYRPHWHLLLFFNSDE---LTSVIQQ 220
D Q++L + + + + ++ YGV P PHWH++LF D+ +T V+++
Sbjct 364 DAQRYLVAVWAKIRTTFKDRNLKVYGVRVVEPHHDGTPHWHMMLFTPQDQQQKVTEVMRR 423
Query 221 FVSE------SWSYGRTTCE-LSRGGSSSYVASYVNSNV 252
+ E + R C+ L+RGG++ Y+A YV N+
Sbjct 424 YALEEDSDEPGAAESRFNCKPLNRGGAAGYIAKYVAKNI 462
> rah:Rahaq_0726 replication protein A
Length=630
Score = 43.9 bits (102), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 51/99 (52%), Gaps = 12/99 (12%)
Query 166 DCQKFLKRLRFHSKNKYNEE-IRFYGVSEYGPR-TYRPHWHLLLFFNSDE---LTSVIQQ 220
D Q++L + + + + ++ YGV P PHWH++LF D+ +T V+++
Sbjct 364 DAQRYLVAVWAKIRTTFKDRNLKVYGVRVVEPHHDGTPHWHMMLFTPQDQQQKVTEVMRR 423
Query 221 FVSE------SWSYGRTTCE-LSRGGSSSYVASYVNSNV 252
+ E + R C+ L+RGG++ Y+A YV N+
Sbjct 424 YALEEDSDEPGAAESRFNCKPLNRGGAAGYIAKYVAKNI 462
> ecm:EcSMS35_4315 replication gene A protein
Length=761
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/102 (25%), Positives = 53/102 (52%), Gaps = 12/102 (12%)
Query 163 NTSDCQKFLKRLRFHSKNKYNE-EIRFYGVSEYGPR-TYRPHWHLLLFFNS---DELTSV 217
N D Q++L R+ + + + +++ YG+ P PHWH++LF NS +++ +
Sbjct 358 NPKDAQRYLCRIWSLMRTAFKDNDLQVYGLRVVEPHHDGTPHWHMMLFCNSRQRNQIIEI 417
Query 218 IQQFVSESWSYGRTTCE-------LSRGGSSSYVASYVNSNV 252
++++ + R L+RGG++ Y+A Y++ N+
Sbjct 418 MRRYALKEDGDERGAARNRFQAKHLNRGGAAGYIAKYISKNI 459
> clp:CPK_ORF00729 hypothetical protein
Length=121
Score = 40.0 bits (92), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/47 (49%), Positives = 29/47 (62%), Gaps = 4/47 (9%)
Query 168 QKFLKRLRFHSKNKYNEEIRFYGVSEYGPRTYRPHWHLLLFFNSDEL 214
Q FLKRLR +IR++G EYG + RPH+HLL+ FN D L
Sbjct 76 QLFLKRLR---DRISPHKIRYFGCGEYGTKLQRPHYHLLI-FNYDSL 118
> enr:H650_11925 replication protein
Length=742
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 47/108 (44%), Gaps = 17/108 (16%)
Query 162 CNTSDCQKFLKRLRFHSKNK-YNEEIRFYGVSEYGPR-TYRPHWHLLLFFNSDELTSVIQ 219
+ SD Q +L L + K + EEIR +G+ P PHWH+L+F +++ V +
Sbjct 345 ASPSDTQNYLTSLWARIRAKLHREEIRIFGIRVAEPHHDATPHWHMLMFMLPEDVERVRK 404
Query 220 QFVSESWS---------------YGRTTCELSRGGSSSYVASYVNSNV 252
+W + + +G ++ YVA Y++ N+
Sbjct 405 VIRDYAWQEDENELSSDKARKARFHAEAIDAEKGSATGYVAKYISKNI 452
> ecol:LY180_10875 replication protein
Length=758
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/102 (24%), Positives = 52/102 (51%), Gaps = 12/102 (12%)
Query 163 NTSDCQKFLKRLRFHSKNKYNE-EIRFYGVSEYGPR-TYRPHWHLLLFFNS---DELTSV 217
N D Q++L R+ + + + +++ YG+ P PHWH++LF N +++ +
Sbjct 358 NPKDAQRYLCRIWSLMRTAFKDNDLQVYGLRVVEPHHDGTPHWHMMLFCNPRQRNQIIEI 417
Query 218 IQQFVSESWSYGRTTCE-------LSRGGSSSYVASYVNSNV 252
++++ + R L+RGG++ Y+A Y++ N+
Sbjct 418 MRRYALKEDGDERGAARNRFQAKHLNRGGAAGYIAKYISKNI 459
> ell:WFL_11150 gpA; putative phage replication initiation protein
Length=758
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/102 (24%), Positives = 52/102 (51%), Gaps = 12/102 (12%)
Query 163 NTSDCQKFLKRLRFHSKNKYNE-EIRFYGVSEYGPR-TYRPHWHLLLFFNS---DELTSV 217
N D Q++L R+ + + + +++ YG+ P PHWH++LF N +++ +
Sbjct 358 NPKDAQRYLCRIWSLMRTAFKDNDLQVYGLRVVEPHHDGTPHWHMMLFCNPRQRNQIIEI 417
Query 218 IQQFVSESWSYGRTTCE-------LSRGGSSSYVASYVNSNV 252
++++ + R L+RGG++ Y+A Y++ N+
Sbjct 418 MRRYALKEDGDERGAARNRFQAKHLNRGGAAGYIAKYISKNI 459
> elw:ECW_m2279 gpA2; DNA replication protein
Length=758
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/102 (24%), Positives = 52/102 (51%), Gaps = 12/102 (12%)
Query 163 NTSDCQKFLKRLRFHSKNKYNE-EIRFYGVSEYGPR-TYRPHWHLLLFFNS---DELTSV 217
N D Q++L R+ + + + +++ YG+ P PHWH++LF N +++ +
Sbjct 358 NPKDAQRYLCRIWSLMRTAFKDNDLQVYGLRVVEPHHDGTPHWHMMLFCNPRQRNQIIEI 417
Query 218 IQQFVSESWSYGRTTCE-------LSRGGSSSYVASYVNSNV 252
++++ + R L+RGG++ Y+A Y++ N+
Sbjct 418 MRRYALKEDGDERGAARNRFQAKHLNRGGAAGYIAKYISKNI 459
> ekf:KO11_12225 gpA; putative phage replication initiation protein
Length=758
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/102 (24%), Positives = 52/102 (51%), Gaps = 12/102 (12%)
Query 163 NTSDCQKFLKRLRFHSKNKYNE-EIRFYGVSEYGPR-TYRPHWHLLLFFNS---DELTSV 217
N D Q++L R+ + + + +++ YG+ P PHWH++LF N +++ +
Sbjct 358 NPKDAQRYLCRIWSLMRTAFKDNDLQVYGLRVVEPHHDGTPHWHMMLFCNPRQRNQIIEI 417
Query 218 IQQFVSESWSYGRTTCE-------LSRGGSSSYVASYVNSNV 252
++++ + R L+RGG++ Y+A Y++ N+
Sbjct 418 MRRYALKEDGDERGAARNRFQAKHLNRGGAAGYIAKYISKNI 459
> eko:EKO11_1676 replication protein A
Length=758
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/102 (24%), Positives = 52/102 (51%), Gaps = 12/102 (12%)
Query 163 NTSDCQKFLKRLRFHSKNKYNE-EIRFYGVSEYGPR-TYRPHWHLLLFFNS---DELTSV 217
N D Q++L R+ + + + +++ YG+ P PHWH++LF N +++ +
Sbjct 358 NPKDAQRYLCRIWSLMRTAFKDNDLQVYGLRVVEPHHDGTPHWHMMLFCNPRQRNQIIEI 417
Query 218 IQQFVSESWSYGRTTCE-------LSRGGSSSYVASYVNSNV 252
++++ + R L+RGG++ Y+A Y++ N+
Sbjct 418 MRRYALKEDGDERGAARNRFQAKHLNRGGAAGYIAKYISKNI 459
> etw:ECSP_2873 phage replication initiation protein
Length=760
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 24/102 (24%), Positives = 52/102 (51%), Gaps = 12/102 (12%)
Query 163 NTSDCQKFLKRLRFHSKNKYNE-EIRFYGVSEYGPR-TYRPHWHLLLFFNS---DELTSV 217
N D Q++L R+ + + + +++ YG+ P PHWH++LF N +++ +
Sbjct 358 NPKDAQRYLCRIWSLMRTAFKDNDLQVYGLRVVEPHHDGTPHWHMMLFCNPRQRNQIIEI 417
Query 218 IQQFVSESWSYGRTTCE-------LSRGGSSSYVASYVNSNV 252
++++ + R L+RGG++ Y+A Y++ N+
Sbjct 418 MRRYALKEDGDERGAARNRFQAKHLNRGGAAGYIAKYISKNI 459
> ecf:ECH74115_3058 bacteriophage replication gene A protein
Length=760
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 24/102 (24%), Positives = 52/102 (51%), Gaps = 12/102 (12%)
Query 163 NTSDCQKFLKRLRFHSKNKYNE-EIRFYGVSEYGPR-TYRPHWHLLLFFNS---DELTSV 217
N D Q++L R+ + + + +++ YG+ P PHWH++LF N +++ +
Sbjct 358 NPKDAQRYLCRIWSLMRTAFKDNDLQVYGLRVVEPHHDGTPHWHMMLFCNPRQRNQIIEI 417
Query 218 IQQFVSESWSYGRTTCE-------LSRGGSSSYVASYVNSNV 252
++++ + R L+RGG++ Y+A Y++ N+
Sbjct 418 MRRYALKEDGDERGAARNRFQAKHLNRGGAAGYIAKYISKNI 459
> ebr:ECB_02004 Replication gene A protein
Length=763
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 24/102 (24%), Positives = 52/102 (51%), Gaps = 12/102 (12%)
Query 163 NTSDCQKFLKRLRFHSKNKYNE-EIRFYGVSEYGPR-TYRPHWHLLLFFNS---DELTSV 217
N D Q++L R+ + + + +++ YG+ P PHWH++LF N +++ +
Sbjct 361 NPKDAQRYLCRIWSLMRTAFKDNDLQVYGLRVVEPHHDGTPHWHMMLFCNPRQRNQIIEI 420
Query 218 IQQFVSESWSYGRTTCE-------LSRGGSSSYVASYVNSNV 252
++++ + R L+RGG++ Y+A Y++ N+
Sbjct 421 MRRYALKEDGDERGAARNRFQAKHLNRGGAAGYIAKYISKNI 462
> ecoh:ECRM13516_2705 Phage replication protein
Length=757
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/102 (24%), Positives = 52/102 (51%), Gaps = 12/102 (12%)
Query 163 NTSDCQKFLKRLRFHSKNKYNE-EIRFYGVSEYGPR-TYRPHWHLLLFFNS---DELTSV 217
N D Q++L R+ + + + +++ YG+ P PHWH++LF N +++ +
Sbjct 358 NPKDAQRYLCRIWSLMRTAFKDNDLQVYGLRVVEPHHDGTPHWHMMLFCNPRQRNQIIEI 417
Query 218 IQQFVSESWSYGRTTCE-------LSRGGSSSYVASYVNSNV 252
++++ + R L+RGG++ Y+A Y++ N+
Sbjct 418 MRRYALKEDGDERGAARNRFQAKHLNRGGAAGYIAKYISKNI 459
> seeh:SEEH1578_06395 replication protein
Length=762
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 24/102 (24%), Positives = 52/102 (51%), Gaps = 12/102 (12%)
Query 163 NTSDCQKFLKRLRFHSKNKYNE-EIRFYGVSEYGPR-TYRPHWHLLLFFNS---DELTSV 217
N D Q++L R+ + + + +++ YG+ P PHWH++LF N +++ +
Sbjct 358 NPKDAQRYLCRIWSLMRTAFKDNDLQVYGLRVVEPHHDGTPHWHMMLFCNPRQRNQIIEI 417
Query 218 IQQFVSESWSYGRTTCE-------LSRGGSSSYVASYVNSNV 252
++++ + R L+RGG++ Y+A Y++ N+
Sbjct 418 MRRYALKEDGDERGAARNRFQAKHLNRGGAAGYIAKYISKNI 459
> ssj:SSON53_23505 replication protein A
Length=765
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 24/102 (24%), Positives = 52/102 (51%), Gaps = 12/102 (12%)
Query 163 NTSDCQKFLKRLRFHSKNKYNE-EIRFYGVSEYGPR-TYRPHWHLLLFFNS---DELTSV 217
N D Q++L R+ + + + +++ YG+ P PHWH++LF N +++ +
Sbjct 358 NPKDAQRYLCRIWSLMRTAFKDNDLQVYGLRVVEPHHDGTPHWHMMLFCNPRQRNQIIEI 417
Query 218 IQQFVSESWSYGRTTCE-------LSRGGSSSYVASYVNSNV 252
++++ + R L+RGG++ Y+A Y++ N+
Sbjct 418 MRRYALKEDGDERGAARNRFQAKHLNRGGAAGYIAKYISKNI 459
> ecz:ECS88_2220 Replication gene A protein (GpA)
Length=774
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 24/102 (24%), Positives = 52/102 (51%), Gaps = 12/102 (12%)
Query 163 NTSDCQKFLKRLRFHSKNKYNE-EIRFYGVSEYGPR-TYRPHWHLLLFFNS---DELTSV 217
N D Q++L R+ + + + +++ YG+ P PHWH++LF N +++ +
Sbjct 372 NPKDAQRYLCRIWSLMRTAFKDNDLQVYGLRVVEPHHDGTPHWHMMLFCNPRQRNQIIEI 431
Query 218 IQQFVSESWSYGRTTCE-------LSRGGSSSYVASYVNSNV 252
++++ + R L+RGG++ Y+A Y++ N+
Sbjct 432 MRRYALKEDGDERGAARNRFQAKHLNRGGAAGYIAKYISKNI 473
> ecoa:APECO78_08335 replication protein A
Length=761
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 24/102 (24%), Positives = 52/102 (51%), Gaps = 12/102 (12%)
Query 163 NTSDCQKFLKRLRFHSKNKYNE-EIRFYGVSEYGPR-TYRPHWHLLLFFNS---DELTSV 217
N D Q++L R+ + + + +++ YG+ P PHWH++LF N +++ +
Sbjct 358 NPKDAQRYLCRIWSLMRTAFKDNDLQVYGLRVVEPHHDGTPHWHMMLFCNPRQRNQIIEI 417
Query 218 IQQFVSESWSYGRTTCE-------LSRGGSSSYVASYVNSNV 252
++++ + R L+RGG++ Y+A Y++ N+
Sbjct 418 MRRYALKEDGDERGAARNRFQAKHLNRGGAAGYIAKYISKNI 459
> ecoo:ECRM13514_4992 Replication gene A protein
Length=768
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 24/102 (24%), Positives = 52/102 (51%), Gaps = 12/102 (12%)
Query 163 NTSDCQKFLKRLRFHSKNKYNE-EIRFYGVSEYGPR-TYRPHWHLLLFFNS---DELTSV 217
N D Q++L R+ + + + +++ YG+ P PHWH++LF N +++ +
Sbjct 358 NPKDAQRYLCRIWSLMRTAFKDNDLQVYGLRVVEPHHDGTPHWHMMLFCNPHQRNQIIEI 417
Query 218 IQQFVSESWSYGRTTCE-------LSRGGSSSYVASYVNSNV 252
++++ + R L+RGG++ Y+A Y++ N+
Sbjct 418 MRRYALKEDGDERGAARNRFQAKHLNRGGAAGYIAKYISKNI 459
> ecv:APECO1_1184 gpA; Phage protein A
Length=751
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 24/102 (24%), Positives = 52/102 (51%), Gaps = 12/102 (12%)
Query 163 NTSDCQKFLKRLRFHSKNKYNE-EIRFYGVSEYGPR-TYRPHWHLLLFFNS---DELTSV 217
N D Q++L R+ + + + +++ YG+ P PHWH++LF N +++ +
Sbjct 358 NPKDAQRYLCRIWSLMRTAFKDNDLQAYGLRVVEPHHDGTPHWHMMLFCNPRQRNQIIEI 417
Query 218 IQQFVSESWSYGRTTCE-------LSRGGSSSYVASYVNSNV 252
++++ + R L+RGG++ Y+A Y++ N+
Sbjct 418 MRRYALKEDGDERGAARNRFQAKHLNRGGAAGYIAKYISKNI 459
> sey:SL1344_2641 putative bacteriophage replication protein
Length=927
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 46/108 (43%), Gaps = 17/108 (16%)
Query 162 CNTSDCQKFLKRLRFHSKNK-YNEEIRFYGVSEYGPR-TYRPHWHLLLFFNSDELTSVIQ 219
+ SD Q +L L + K + EEIR +G+ P PHWH+L+F +++ V
Sbjct 362 ASPSDTQNYLTGLWARIRAKLHREEIRIFGIRVAEPHHDGTPHWHMLMFMLPEDVERVRL 421
Query 220 QFVSESWSYGR---------------TTCELSRGGSSSYVASYVNSNV 252
+W R + +G ++ YVA Y++ N+
Sbjct 422 IIRDYAWEEDRHELKSDKAKKARFHAEAIDPEKGSATGYVAKYISKNI 469
> sef:UMN798_2889 bacteriophage replication protein
Length=909
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 46/108 (43%), Gaps = 17/108 (16%)
Query 162 CNTSDCQKFLKRLRFHSKNK-YNEEIRFYGVSEYGPR-TYRPHWHLLLFFNSDELTSVIQ 219
+ SD Q +L L + K + EEIR +G+ P PHWH+L+F +++ V
Sbjct 344 ASPSDTQNYLTGLWARIRAKLHREEIRIFGIRVAEPHHDGTPHWHMLMFMLPEDVERVRL 403
Query 220 QFVSESWSYGR---------------TTCELSRGGSSSYVASYVNSNV 252
+W R + +G ++ YVA Y++ N+
Sbjct 404 IIRDYAWEEDRHELKSDKAKKARFHAEAIDPEKGSATGYVAKYISKNI 451
> seb:STM474_2794 hypothetical protein
Length=909
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 46/108 (43%), Gaps = 17/108 (16%)
Query 162 CNTSDCQKFLKRLRFHSKNK-YNEEIRFYGVSEYGPR-TYRPHWHLLLFFNSDELTSVIQ 219
+ SD Q +L L + K + EEIR +G+ P PHWH+L+F +++ V
Sbjct 344 ASPSDTQNYLTGLWARIRAKLHREEIRIFGIRVAEPHHDGTPHWHMLMFMLPEDVERVRL 403
Query 220 QFVSESWSYGR---------------TTCELSRGGSSSYVASYVNSNV 252
+W R + +G ++ YVA Y++ N+
Sbjct 404 IIRDYAWEEDRHELKSDKAKKARFHAEAIDPEKGSATGYVAKYISKNI 451
> ecol:LY180_20360 replication protein
Length=761
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 24/102 (24%), Positives = 52/102 (51%), Gaps = 12/102 (12%)
Query 163 NTSDCQKFLKRLRFHSKNKYNE-EIRFYGVSEYGPR-TYRPHWHLLLFFNS---DELTSV 217
N D Q++L R+ + + + +++ YG+ P PHWH++LF N +++ +
Sbjct 358 NPKDAQRYLCRIWSLMRTAFKDNDLQAYGLRVVEPHHDGTPHWHMMLFCNPRQRNQIIEI 417
Query 218 IQQFVSESWSYGRTTCE-------LSRGGSSSYVASYVNSNV 252
++++ + R L+RGG++ Y+A Y++ N+
Sbjct 418 MRRYALKEDGDERGAARNRFQAKHLNRGGAAGYIAKYISKNI 459
> ell:WFL_20630 Replication gene A protein (GpA)
Length=761
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 24/102 (24%), Positives = 52/102 (51%), Gaps = 12/102 (12%)
Query 163 NTSDCQKFLKRLRFHSKNKYNE-EIRFYGVSEYGPR-TYRPHWHLLLFFNS---DELTSV 217
N D Q++L R+ + + + +++ YG+ P PHWH++LF N +++ +
Sbjct 358 NPKDAQRYLCRIWSLMRTAFKDNDLQAYGLRVVEPHHDGTPHWHMMLFCNPRQRNQIIEI 417
Query 218 IQQFVSESWSYGRTTCE-------LSRGGSSSYVASYVNSNV 252
++++ + R L+RGG++ Y+A Y++ N+
Sbjct 418 MRRYALKEDGDERGAARNRFQAKHLNRGGAAGYIAKYISKNI 459
> elw:ECW_m4232 gpA1; replication gene A protein
Length=761
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 24/102 (24%), Positives = 52/102 (51%), Gaps = 12/102 (12%)
Query 163 NTSDCQKFLKRLRFHSKNKYNE-EIRFYGVSEYGPR-TYRPHWHLLLFFNS---DELTSV 217
N D Q++L R+ + + + +++ YG+ P PHWH++LF N +++ +
Sbjct 358 NPKDAQRYLCRIWSLMRTAFKDNDLQAYGLRVVEPHHDGTPHWHMMLFCNPRQRNQIIEI 417
Query 218 IQQFVSESWSYGRTTCE-------LSRGGSSSYVASYVNSNV 252
++++ + R L+RGG++ Y+A Y++ N+
Sbjct 418 MRRYALKEDGDERGAARNRFQAKHLNRGGAAGYIAKYISKNI 459
> ekf:KO11_02960 Phage protein A
Length=761
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 24/102 (24%), Positives = 52/102 (51%), Gaps = 12/102 (12%)
Query 163 NTSDCQKFLKRLRFHSKNKYNE-EIRFYGVSEYGPR-TYRPHWHLLLFFNS---DELTSV 217
N D Q++L R+ + + + +++ YG+ P PHWH++LF N +++ +
Sbjct 358 NPKDAQRYLCRIWSLMRTAFKDNDLQAYGLRVVEPHHDGTPHWHMMLFCNPRQRNQIIEI 417
Query 218 IQQFVSESWSYGRTTCE-------LSRGGSSSYVASYVNSNV 252
++++ + R L+RGG++ Y+A Y++ N+
Sbjct 418 MRRYALKEDGDERGAARNRFQAKHLNRGGAAGYIAKYISKNI 459
> eko:EKO11_4433 replication protein A
Length=761
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 24/102 (24%), Positives = 52/102 (51%), Gaps = 12/102 (12%)
Query 163 NTSDCQKFLKRLRFHSKNKYNE-EIRFYGVSEYGPR-TYRPHWHLLLFFNS---DELTSV 217
N D Q++L R+ + + + +++ YG+ P PHWH++LF N +++ +
Sbjct 358 NPKDAQRYLCRIWSLMRTAFKDNDLQAYGLRVVEPHHDGTPHWHMMLFCNPRQRNQIIEI 417
Query 218 IQQFVSESWSYGRTTCE-------LSRGGSSSYVASYVNSNV 252
++++ + R L+RGG++ Y+A Y++ N+
Sbjct 418 MRRYALKEDGDERGAARNRFQAKHLNRGGAAGYIAKYISKNI 459
> sbz:A464_2745 Phage replication protein
Length=690
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 46/108 (43%), Gaps = 17/108 (16%)
Query 162 CNTSDCQKFLKRLRFHSKNK-YNEEIRFYGVSEYGPR-TYRPHWHLLLFFNSDELTSVIQ 219
+ SD Q +L L + K + EEIR +G+ P PHWH+L+F +++ V
Sbjct 294 ASPSDTQSYLTGLWARIRAKLHREEIRIFGIRVAEPHHDGTPHWHMLMFMLPEDVERVRL 353
Query 220 QFVSESWSYGR---------------TTCELSRGGSSSYVASYVNSNV 252
+W R + +G ++ YVA Y++ N+
Sbjct 354 IIRDYAWEEDRHELRSDKAKKARFHAEAIDSEKGSATGYVAKYISKNI 401
> kok:KONIH1_00500 replication protein
Length=871
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 14/100 (14%)
Query 167 CQKFLKRLRFHSKNKYN-EEIRFYGVSEYGPR-TYRPHWHLLLFFNSDEL---TSVIQQF 221
QK+L ++ + K+ E+IR +G P PHWHLLLF +E+ T + ++
Sbjct 369 TQKYLCKVWARVRAKWGREKIRTFGFRVAEPHHDATPHWHLLLFLRPEEVELATDIFHEY 428
Query 222 V---------SESWSYGRTTCELSRGGSSSYVASYVNSNV 252
+E + + E G ++ Y+A Y++ N+
Sbjct 429 ALKEDGHEPGAEEYRFTAKPIEAEHGSATGYIAKYISKNI 468
> pmr:PMI1997 phage replication protein
Length=792
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 50/99 (51%), Gaps = 12/99 (12%)
Query 166 DCQKFLKRLRFHSKNKYNEE-IRFYGVSEYGPR-TYRPHWHLLLFFNSDELTSVIQ---Q 220
D Q++L ++ + + ++ I +YG+ P PHWH+++F + + S I+ +
Sbjct 366 DGQRYLVKIWAKIRTAFKDKGINYYGIRVVEPHHDATPHWHMMMFLDKSQRASAIEIMRK 425
Query 221 FVSESWSYGRTTCE-------LSRGGSSSYVASYVNSNV 252
+ E R + L++GG++ Y+A Y++ N+
Sbjct 426 YALEEDGEERGAKKHRFEAKHLNKGGATGYLAKYISKNI 464
> ent:Ent638_3505 bacteriophage replication gene A
Length=740
Score = 41.6 bits (96), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 46/108 (43%), Gaps = 17/108 (16%)
Query 162 CNTSDCQKFLKRLRFHSKNK-YNEEIRFYGVSEYGPR-TYRPHWHLLLFFNSDELTSVIQ 219
+ SD Q +L L + K + EEIR +G+ P PHWH+L+F +++ V
Sbjct 344 ASPSDTQGYLTGLWARIRAKLHREEIRIFGIRVAEPHHDGTPHWHMLMFMLPEDVERVRL 403
Query 220 QFVSESWSYGR---------------TTCELSRGGSSSYVASYVNSNV 252
+W R + +G ++ YVA Y++ N+
Sbjct 404 IIRDYAWEEDRHELRSDKAKKARFHAEAIDPEKGSATGYVAKYISKNI 451
> ena:ECNA114_4023 Putative phage replication protein
Length=759
Score = 41.2 bits (95), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 24/102 (24%), Positives = 52/102 (51%), Gaps = 12/102 (12%)
Query 163 NTSDCQKFLKRLRFHSKNKYNE-EIRFYGVSEYGPR-TYRPHWHLLLFFNS---DELTSV 217
N D Q++L R+ + + + +++ YG+ P PHWH++LF N +++ +
Sbjct 358 NPKDAQRYLCRIWSLMRTAFKDNDLQAYGLRVVEPHHDGTPHWHMMLFCNPRQRNQIIEI 417
Query 218 IQQFVSESWSYGRTTCE-------LSRGGSSSYVASYVNSNV 252
++++ + R L+RGG++ Y+A Y++ N+
Sbjct 418 MRRYALKEDGDERGAARNRFQAKHLNRGGAAGYIAKYISKNI 459
> kpn:KPN_04887 putative prophage protein
Length=606
Score = 41.2 bits (95), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 46/108 (43%), Gaps = 17/108 (16%)
Query 162 CNTSDCQKFLKRLRFHSKNK-YNEEIRFYGVSEYGPR-TYRPHWHLLLFFNSDELTSVIQ 219
+ SD Q +L L + K + EEIR +G+ P PHWH+L+F +++ V
Sbjct 209 ASPSDTQSYLTGLWARIRAKLHREEIRIFGIRVAEPHHDGTPHWHMLMFMLPEDVERVRL 268
Query 220 QFVSESWSYGR---------------TTCELSRGGSSSYVASYVNSNV 252
+W R + +G ++ YVA Y++ N+
Sbjct 269 IIRDYAWEEDRHELRSDKAKKARFHAEAIDPEKGSATGYVAKYISKNI 316
> hif:HIBPF01220 bacteriophage replication gene a
Length=779
Score = 41.2 bits (95), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 30/135 (22%), Positives = 58/135 (43%), Gaps = 24/135 (18%)
Query 186 IRFYGVSEYGP-RTYRPHWHLLLFFNSDELTSVIQQFVSESWSYGRT------------T 232
I+FYG+ P + PHWH L + ++ VI+ F ++
Sbjct 442 IKFYGMRVAEPHKDGTPHWHALFYVQAEHKEEVIRLFKQKALELDGNEKGAAEHRCKVEE 501
Query 233 CELSRGGSSSYVASYVNSNV---CL--------PSLYLQHKEIRARSLHSKGYGNNYVFP 281
C+ ++G +++Y+A Y+ N+ L P+L L +R R+ S+ + F
Sbjct 502 CDKTKGSATAYIAKYIAKNIDGFALAGEVSDEDPTLSLHDNALRVRAWASRWGIRQFQFY 561
Query 282 TQATIHEFDKMYSLL 296
A+I + ++ L+
Sbjct 562 GGASISVWRELRRLI 576
> kok:KONIH1_21995 replication protein
Length=689
Score = 41.2 bits (95), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 46/108 (43%), Gaps = 17/108 (16%)
Query 162 CNTSDCQKFLKRLRFHSKNK-YNEEIRFYGVSEYGPR-TYRPHWHLLLFFNSDELTSVIQ 219
+ SD Q +L L + K + EEIR +G+ P PHWH+L+F +++ V
Sbjct 294 ASPSDTQSYLTGLWARIRAKLHREEIRIFGIRVAEPHHDGTPHWHMLMFMLPEDVERVRL 353
Query 220 QFVSESWSYGR---------------TTCELSRGGSSSYVASYVNSNV 252
+W R + +G ++ YVA Y++ N+
Sbjct 354 IIRDYAWEEDRHELRSDKAQKARFHAEAIDPEKGSATGYVAKYISKNI 401
> kpm:KPHS_40100 gp36
Length=687
Score = 41.2 bits (95), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 46/108 (43%), Gaps = 17/108 (16%)
Query 162 CNTSDCQKFLKRLRFHSKNK-YNEEIRFYGVSEYGPR-TYRPHWHLLLFFNSDELTSVIQ 219
+ SD Q +L L + K + EEIR +G+ P PHWH+L+F +++ V
Sbjct 294 ASPSDTQSYLTGLWARIRAKLHREEIRIFGIRVAEPHHDGTPHWHMLMFMLPEDVERVRL 353
Query 220 QFVSESWSYGR---------------TTCELSRGGSSSYVASYVNSNV 252
+W R + +G ++ YVA Y++ N+
Sbjct 354 IIRDYAWEEDRHELRSDKAKKARFHAEAIDPEKGSATGYVAKYISKNI 401
> csi:P262_01289 A protein
Length=748
Score = 41.2 bits (95), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 28/108 (26%), Positives = 51/108 (47%), Gaps = 17/108 (16%)
Query 162 CNTSDCQKFLKRLRFHSKNK-YNEEIRFYGVSEYGPR-TYRPHWHLLLFF---NSDELTS 216
+ +D Q++L L + K + ++IR +G+ P PHWH+L+F + D + +
Sbjct 344 ASPADTQRYLTGLWARIRAKLHRDDIRIFGIRVAEPHHDATPHWHMLMFMLPEDVDRVRA 403
Query 217 VIQQFV---------SESWSYGRTTCEL---SRGGSSSYVASYVNSNV 252
VI ++ SE R E +G ++ YVA Y++ N+
Sbjct 404 VISRYAREEDHHELKSEKAREARFHAEAIDPDKGSATGYVAKYISKNI 451
> kpz:KPNIH27_08145 replication protein A
Length=661
Score = 41.2 bits (95), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 24/105 (23%), Positives = 50/105 (48%), Gaps = 17/105 (16%)
Query 165 SDCQKFLKRLRFHSKNK-YNEEIRFYGVSEYGPR-TYRPHWHLLLFFNSDELTSVI---- 218
+D Q +L+++ + K + E++R +G+ P PHWH+LLF +E+ V
Sbjct 327 ADTQGYLRKIWGRIRAKLHREDLRVFGIRVAEPHHDGTPHWHMLLFMRPEEVEQVRGILR 386
Query 219 --------QQFVSESWSYGR---TTCELSRGGSSSYVASYVNSNV 252
+ +++ R + + +G ++ YVA Y++ N+
Sbjct 387 DYAMDEDHGELITDKARKARFHAESIDPEKGSATGYVAKYISKNI 431
> amg:AMEC673_00400 replication protein A
Length=547
Score = 40.4 bits (93), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 23/64 (36%), Positives = 31/64 (48%), Gaps = 12/64 (19%)
Query 201 PHWHLLLFFN---SDELTSVIQQFV----SESWSYGRTTCEL-----SRGGSSSYVASYV 248
PHWH+LLF N SD SVI + + C+ SRG ++ Y+A YV
Sbjct 338 PHWHMLLFINPIHSDPFKSVINHYALQEDGDKAGAQENRCDFKDIDYSRGSATGYIAKYV 397
Query 249 NSNV 252
+ NV
Sbjct 398 SKNV 401
> kln:LH22_05105 replication protein
Length=749
Score = 40.8 bits (94), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 28/105 (27%), Positives = 50/105 (48%), Gaps = 17/105 (16%)
Query 165 SDCQKFLKRLRFHSKNK-YNEEIRFYGVSEYGPR-TYRPHWHLLLFF---NSDELTSVIQ 219
SD Q++L + + K + E+IR +G+ P PHWH+L+F N D++ +I+
Sbjct 349 SDTQRYLCTVWQKIRAKLHREDIRIFGIRVAEPHHDGTPHWHMLMFMLPENVDQVRQIIR 408
Query 220 QFVSESWSYGRTT------------CELSRGGSSSYVASYVNSNV 252
+ S TT + +G ++ YVA Y++ N+
Sbjct 409 DYAYHEDSGELTTYKARKARFHAEAIDPEKGSATGYVAKYISKNI 453
> eih:ECOK1_0937 gpA; replication gene A protein
Length=761
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/102 (25%), Positives = 49/102 (48%), Gaps = 12/102 (12%)
Query 163 NTSDCQKFLKRLRFHSKNKYNE-EIRFYGVSEYGPR-TYRPHWHLLLFFNSDELTSVIQQ 220
N D Q++L R+ + + + +++ YG+ P PHWH++LF N + +I+
Sbjct 358 NPKDAQRYLCRIWSLMRTAFKDNDLQVYGLRVVEPHHDGTPHWHMMLFCNPRQRNQIIET 417
Query 221 FV-------SESWSYGRTTCE---LSRGGSSSYVASYVNSNV 252
+ R + L+RGG++ Y+A Y++ N+
Sbjct 418 MRRYALKEDGDERGAERNRFQAKHLNRGGAAGYIAKYISKNI 459
> senj:CFSAN001992_20250 Replication protein GpA
Length=741
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 46/108 (43%), Gaps = 17/108 (16%)
Query 162 CNTSDCQKFLKRLRFHSKNK-YNEEIRFYGVSEYGPR-TYRPHWHLLLFFNSDELTSVIQ 219
+ SD Q +L L + K + EEIR +G+ P PHWH+L+F +++ V
Sbjct 345 ASPSDTQSYLTGLWARIRAKLHREEIRIFGIRVAEPHHDGTPHWHMLIFMLPEDVERVRL 404
Query 220 QFVSESWS---------------YGRTTCELSRGGSSSYVASYVNSNV 252
+W + + +G ++ YVA Y++ N+
Sbjct 405 IIRDYAWEEDHHELKSDKAKKARFHAEAIDPEKGSATGYVAKYISKNI 452
> vex:VEA_003288 replication protein
Length=514
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/101 (26%), Positives = 45/101 (45%), Gaps = 14/101 (14%)
Query 166 DCQKFLKRLRFHSKNKYNE-EIRFYGVSEYGPR-TYRPHWHLLLFFNSDELTSVIQQF-- 221
D Q +L ++K N +RFYG P+ PHWHLLLF + + ++ Q
Sbjct 267 DGQSYLNETWKLIRSKLNRLGVRFYGFRVAEPQHDGTPHWHLLLFVEAKDYETMTQTMRE 326
Query 222 ----------VSESWSYGRTTCELSRGGSSSYVASYVNSNV 252
+E + + S+G ++ Y+A Y++ N+
Sbjct 327 YSMREDGDEKGAEQHRFTEVKIDPSKGSATGYIAKYISKNI 367
> seen:SE451236_19665 replication protein
Length=744
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 46/108 (43%), Gaps = 17/108 (16%)
Query 162 CNTSDCQKFLKRLRFHSKNK-YNEEIRFYGVSEYGPR-TYRPHWHLLLFFNSDELTSVIQ 219
+ SD Q +L L + K + EEIR +G+ P PHWH+L+F +++ V
Sbjct 347 ASPSDTQSYLTGLWARIRAKLHREEIRIFGIRVAEPHHDGTPHWHMLMFMLPEDVERVRL 406
Query 220 QFVSESWS---------------YGRTTCELSRGGSSSYVASYVNSNV 252
+W + + +G ++ YVA Y++ N+
Sbjct 407 IIRDYAWEEDHHELRSDKAKKARFHAEAIDPEKGSATGYVAKYISKNI 454
> sev:STMMW_32051 bacteriophage replication protein
Length=747
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 46/108 (43%), Gaps = 17/108 (16%)
Query 162 CNTSDCQKFLKRLRFHSKNK-YNEEIRFYGVSEYGPR-TYRPHWHLLLFFNSDELTSVIQ 219
+ SD Q +L L + K + EEIR +G+ P PHWH+L+F +++ V
Sbjct 345 ASPSDTQSYLTGLWARIRAKLHREEIRIFGIRVAEPHHDGTPHWHMLIFMLPEDVERVRL 404
Query 220 QFVSESWS---------------YGRTTCELSRGGSSSYVASYVNSNV 252
+W + + +G ++ YVA Y++ N+
Sbjct 405 IIRDYAWEEDHHELKSDKAKKARFHAEAIDPEKGSATGYVAKYISKNI 452
> sbg:SBG_2836 gpA; bacteriophage replication protein
Length=739
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 46/108 (43%), Gaps = 17/108 (16%)
Query 162 CNTSDCQKFLKRLRFHSKNK-YNEEIRFYGVSEYGPR-TYRPHWHLLLFFNSDELTSVIQ 219
+ SD Q +L L + K + +EIR +G+ P PHWH+L+F +++ V
Sbjct 344 ASPSDTQSYLTGLWARIRAKLHRKEIRIFGIRVAEPHHDGTPHWHMLMFMLPEDVERVRL 403
Query 220 QFVSESWSYGR---------------TTCELSRGGSSSYVASYVNSNV 252
+W R + +G ++ YVA Y++ N+
Sbjct 404 IIRDYAWEEDRHELKSDKAKKARFHAEAIDPEKGSATGYVAKYISKNI 451
> yel:LC20_00404 ndoA; putative replication endonuclease from
prophage-like region
Length=801
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 51/108 (47%), Gaps = 17/108 (16%)
Query 162 CNTSDCQKFLKRLRFHSKNK-YNEEIRFYGVSEYGPR-TYRPHWHLLLFF---NSDELTS 216
+ + Q++L+ + + K + E+IR +G+ P PHWH+LLF + D++
Sbjct 351 ADPARTQRYLRGVWSRVRAKLHREDIRVFGIRVAEPHHDGTPHWHMLLFMLPESVDQVRK 410
Query 217 VIQQFVSES------------WSYGRTTCELSRGGSSSYVASYVNSNV 252
V++ + SE + + +G ++ Y+A Y++ N+
Sbjct 411 VLRDYASEEDEGELYSAKARKARFHAEAIDPEKGSATGYIAKYISKNI 458
Lambda K H a alpha
0.324 0.138 0.428 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 1287041136798