bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: all_orgs
           14,240,465 sequences; 5,121,972,263 total letters





Query= Contig-7_CDS_annotation_glimmer3.pl_2_7

Length=91
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  pop:POPTR_0006s00370g  POPTRDRAFT_801661; hypothetical protein      32.7    8.1
  fpa:FPR_06170  amino acid ABC transporter substrate-binding pro...  32.3    9.7


> pop:POPTR_0006s00370g  POPTRDRAFT_801661; hypothetical protein
Length=686

 Score = 32.7 bits (73),  Expect = 8.1, Method: Composition-based stats.
 Identities = 18/61 (30%), Positives = 37/61 (61%), Gaps = 3/61 (5%)

Query  17   INDFYDYLSAHPESDSFLKSRTVG-FVCPPKENISFWNDLNTTLSSLKNSVTQRIFQKVK  75
            IND+ D+L A   + + ++  + G + CP   +I  +N+ + T+  L+NS++  + +KVK
Sbjct  550  INDYLDFLCASGYNSTMIEPFSDGPYKCPESTSIFDFNNPSITIRQLRNSMS--VIRKVK  607

Query  76   H  76
            +
Sbjct  608  N  608


> fpa:FPR_06170  amino acid ABC transporter substrate-binding protein, 
PAAT family (TC 3.A.1.3.-)
Length=275

 Score = 32.3 bits (72),  Expect = 9.7, Method: Composition-based stats.
 Identities = 16/49 (33%), Positives = 27/49 (55%), Gaps = 5/49 (10%)

Query  20   FYDYLSAHPESDSFLKSRT-----VGFVCPPKENISFWNDLNTTLSSLK  63
            FYDYL+ HP++D  L ++T     V       E+ ++ + LNT +  L+
Sbjct  206  FYDYLNVHPDADFKLVAQTAEASHVAIPVLKSEDTAYLDALNTAIEELR  254



Lambda      K        H        a         alpha
   0.320    0.135    0.412    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 127599116940