bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: all_orgs
14,240,465 sequences; 5,121,972,263 total letters
Query= Contig-8_CDS_annotation_glimmer3.pl_2_3
Length=450
Score E
Sequences producing significant alignments: (Bits) Value
clp:CPK_ORF00729 hypothetical protein 90.1 1e-18
cpt:CpB0227 hypothetical protein 82.4 5e-16
cpj:CPj0222 hypothetical protein 82.4 5e-16
cpa:CP0543 hypothetical protein 82.4 5e-16
cpn:CPn0222 hypothetical protein 82.4 5e-16
ecm:EcSMS35_4793 hypothetical protein 42.0 0.16
ecz:ECS88_3297 hypothetical protein 41.6 0.22
ecv:APECO1_3496 hypothetical protein 41.6 0.22
ecc:c5172 hypothetical protein 41.6 0.22
ena:ECNA114_4547 hypothetical protein 41.2 0.24
btl:BALH_0258 Rep protein 41.2 0.28
eoc:CE10_4267 hypothetical protein 40.8 0.32
ect:ECIAI39_4232 hypothetical protein 40.8 0.32
ecz:ECS88_4652 hypothetical protein 40.4 0.47
ecq:ECED1_3481 hypothetical protein 40.4 0.47
ecv:APECO1_2309 hypothetical protein 40.4 0.47
senn:SN31241_6720 Intergenic-region protein 40.0 0.60
ecw:EcE24377A_3395 hypothetical protein 39.7 0.81
ecc:c4558 hypothetical protein 39.7 0.83
elo:EC042_3214 hypothetical protein 39.7 0.89
sri:SELR_11130 hypothetical protein 39.7 0.93
rus:RBI_I01590 hypothetical phage protein 38.9 1.5
eck:EC55989_4880 hypothetical protein 38.1 2.3
eab:ECABU_c49190 hypothetical protein 38.1 2.4
elu:UM146_22130 hypothetical protein 37.7 3.2
eci:UTI89_C4981 hypothetical protein 37.7 3.2
ecp:ECP_4622 hypothetical protein 37.7 3.2
seh:SeHA_C4689 hypothetical protein 37.7 3.2
ecm:EcSMS35_3198 hypothetical protein 37.7 3.6
pse:NH8B_2279 putative phage replication protein 38.1 3.8
lsp:Bsph_3782 hypothetical protein 37.7 3.8
elh:ETEC_3936 hypothetical protein 37.4 4.1
sta:STHERM_c12000 hypothetical protein 37.4 4.9
rsd:TGRD_578 hypothetical protein 36.2 7.1
vcn:VOLCADRAFT_93739 hypothetical protein 37.4 7.2
phd:102319745 RPGR; retinitis pigmentosa GTPase regulator 37.4 8.3
> clp:CPK_ORF00729 hypothetical protein
Length=121
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/102 (45%), Positives = 65/102 (64%), Gaps = 6/102 (6%)
Query 82 FMAVPCGKCILCRDKKKREWSFRATCENVFSTSIPIFVTLTYNNKHLPKYG-VFKEEIQL 140
++ +PC KC CR + + WS+R E F+TLTY++KHLP+YG + K +QL
Sbjct 19 WVLMPCLKCRFCRTQHAKVWSYRCVHEASLYEK-NCFLTLTYDDKHLPQYGSLVKLHLQL 77
Query 141 FMKRLRIRLDRLGYKHQIRYFFCSEYGSKSGRPHYHAIFWNF 182
F+KRLR R+ H+IRYF C EYG+K RPHYH + +N+
Sbjct 78 FLKRLRDRIS----PHKIRYFGCGEYGTKLQRPHYHLLIFNY 115
> cpt:CpB0227 hypothetical protein
Length=113
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 61/99 (62%), Gaps = 6/99 (6%)
Query 82 FMAVPCGKCILCRDKKKREWSFRATCENVFSTSIPIFVTLTYNNKHLPKYG-VFKEEIQL 140
++ +PC KC CR + + WS+R E F+TLTY++KHLP+YG + K +QL
Sbjct 19 WVLMPCLKCRFCRTQHAKVWSYRCVHEASLYEK-NCFLTLTYDDKHLPQYGSLVKLHLQL 77
Query 141 FMKRLRIRLDRLGYKHQIRYFFCSEYGSKSGRPHYHAIF 179
F+KRLR ++ H+IRYF C YG+K RPHYH +
Sbjct 78 FLKRLR----KMISPHKIRYFECGAYGTKLQRPHYHLLL 112
> cpj:CPj0222 hypothetical protein
Length=113
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 61/99 (62%), Gaps = 6/99 (6%)
Query 82 FMAVPCGKCILCRDKKKREWSFRATCENVFSTSIPIFVTLTYNNKHLPKYG-VFKEEIQL 140
++ +PC KC CR + + WS+R E F+TLTY++KHLP+YG + K +QL
Sbjct 19 WVLMPCLKCRFCRTQHAKVWSYRCVHEASLYEK-NCFLTLTYDDKHLPQYGSLVKLHLQL 77
Query 141 FMKRLRIRLDRLGYKHQIRYFFCSEYGSKSGRPHYHAIF 179
F+KRLR ++ H+IRYF C YG+K RPHYH +
Sbjct 78 FLKRLR----KMISPHKIRYFECGAYGTKLQRPHYHLLL 112
> cpa:CP0543 hypothetical protein
Length=113
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 61/99 (62%), Gaps = 6/99 (6%)
Query 82 FMAVPCGKCILCRDKKKREWSFRATCENVFSTSIPIFVTLTYNNKHLPKYG-VFKEEIQL 140
++ +PC KC CR + + WS+R E F+TLTY++KHLP+YG + K +QL
Sbjct 19 WVLMPCLKCRFCRTQHAKVWSYRCVHEASLYEK-NCFLTLTYDDKHLPQYGSLVKLHLQL 77
Query 141 FMKRLRIRLDRLGYKHQIRYFFCSEYGSKSGRPHYHAIF 179
F+KRLR ++ H+IRYF C YG+K RPHYH +
Sbjct 78 FLKRLR----KMISPHKIRYFECGAYGTKLQRPHYHLLL 112
> cpn:CPn0222 hypothetical protein
Length=113
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 61/99 (62%), Gaps = 6/99 (6%)
Query 82 FMAVPCGKCILCRDKKKREWSFRATCENVFSTSIPIFVTLTYNNKHLPKYG-VFKEEIQL 140
++ +PC KC CR + + WS+R E F+TLTY++KHLP+YG + K +QL
Sbjct 19 WVLMPCLKCRFCRTQHAKVWSYRCVHEASLYEK-NCFLTLTYDDKHLPQYGSLVKLHLQL 77
Query 141 FMKRLRIRLDRLGYKHQIRYFFCSEYGSKSGRPHYHAIF 179
F+KRLR ++ H+IRYF C YG+K RPHYH +
Sbjct 78 FLKRLR----KMISPHKIRYFECGAYGTKLQRPHYHLLL 112
> ecm:EcSMS35_4793 hypothetical protein
Length=243
Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 18/144 (13%)
Query 131 YGVFKEEIQLFMKRLRIRLDRLGYKHQIRYFFCSEYGSKSGRPHYHAIF------WNFPR 184
+ K +IQ + ++ R R ++ +RYF+C E+G + GR HYH I W P
Sbjct 59 FASLKAKIQAYQRKKR-RANKRVRATTLRYFWCREFGKEKGRKHYHVILLLNKDTWCSPG 117
Query 185 DGALSNIWNVVKMIEKAW--SYNGEP------LGFAYAVPCDKGAIGYVMKYMSKIPRIP 236
D + + ++ +I+ AW + + EP + F+ P K P +P
Sbjct 118 DFTVPS--SLATLIQLAWCSALHLEPWQGNGLVHFSRRTPFRKPTSSDARPSSDDTP-VP 174
Query 237 DNMNNVFFLSSRKDGGIGAAYARR 260
++ S +K GG + +R
Sbjct 175 GGCSDTRKDSDKKSGGSAVLWVKR 198
> ecz:ECS88_3297 hypothetical protein
Length=246
Score = 41.6 bits (96), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 5/76 (7%)
Query 131 YGVFKEEIQLFMKRLRIRLDRLGYKHQIRYFFCSEYGSKSGRPHYHAIFW----NFPRDG 186
+ K +IQ + ++ R R+ + +RYF+C E+G GR HYH I + G
Sbjct 59 FASLKAKIQAYQRKKRCANQRV-HATSLRYFWCREFGKMYGRKHYHVILLLNKDTWCSIG 117
Query 187 ALSNIWNVVKMIEKAW 202
S ++ MI++AW
Sbjct 118 DFSEPSSLATMIQEAW 133
> ecv:APECO1_3496 hypothetical protein
Length=246
Score = 41.6 bits (96), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 5/76 (7%)
Query 131 YGVFKEEIQLFMKRLRIRLDRLGYKHQIRYFFCSEYGSKSGRPHYHAIFW----NFPRDG 186
+ K +IQ + ++ R R+ + +RYF+C E+G GR HYH I + G
Sbjct 59 FASLKAKIQAYQRKKRCANQRV-HATSLRYFWCREFGKMYGRKHYHVILLLNKDTWCSIG 117
Query 187 ALSNIWNVVKMIEKAW 202
S ++ MI++AW
Sbjct 118 DFSEPSSLATMIQEAW 133
> ecc:c5172 hypothetical protein
Length=246
Score = 41.6 bits (96), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 5/76 (7%)
Query 131 YGVFKEEIQLFMKRLRIRLDRLGYKHQIRYFFCSEYGSKSGRPHYHAIFW----NFPRDG 186
+ K +IQ + ++ R R+ + +RYF+C E+G GR HYH I + G
Sbjct 59 FASLKAKIQAYQRKKRCANQRV-HATSLRYFWCREFGKMYGRKHYHVILLLNKDTWCSIG 117
Query 187 ALSNIWNVVKMIEKAW 202
S ++ MI++AW
Sbjct 118 DFSEPSSLATMIQEAW 133
> ena:ECNA114_4547 hypothetical protein
Length=246
Score = 41.2 bits (95), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (51%), Gaps = 7/77 (9%)
Query 131 YGVFKEEIQLFMKRLRIRLDRLGYKHQIRYFFCSEYGSKSGRPHYHAIFWNFPRD----- 185
+ K +IQ + ++ R R+ + +RYF+C E+G GR HYH I +D
Sbjct 59 FASLKAKIQAYQRKKRCANQRV-HATSLRYFWCREFGKMYGRKHYHVILL-LNKDTWCSL 116
Query 186 GALSNIWNVVKMIEKAW 202
G S ++ MI++AW
Sbjct 117 GDFSEPSSLATMIQEAW 133
> btl:BALH_0258 Rep protein
Length=276
Score = 41.2 bits (95), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 43/135 (32%), Positives = 57/135 (42%), Gaps = 24/135 (18%)
Query 118 FVTLTYNNKHLPKYGVFKEEIQLFMKRLRIRLDRLGYKHQIRYFFCSEYGSKSGRPHYHA 177
FVTLT+ K++ +E + F++RL RL K ++Y E K G HYH
Sbjct 97 FVTLTFR-KNVESIDYANDEFRKFIQRLNYRL-YCTKKATLKYLATWE-KQKRGSIHYHV 153
Query 178 IFWNFP--RDGALSNIWNVVKMIEKAWSYNGEPLGFAYAVPCD---KGAIG-YVMKYMSK 231
IF+N P ++ L NIW GF D K G YV KY SK
Sbjct 154 IFFNLPFIKNLELKNIW---------------KHGFVKINKIDVDSKDNRGRYVSKYFSK 198
Query 232 IPRIPDNMNNVFFLS 246
I ++ FF S
Sbjct 199 DLEIKEHKKKAFFKS 213
> eoc:CE10_4267 hypothetical protein
Length=243
Score = 40.8 bits (94), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (51%), Gaps = 7/77 (9%)
Query 131 YGVFKEEIQLFMKRLRIRLDRLGYKHQIRYFFCSEYGSKSGRPHYHAIFWNFPRD----- 185
+ K +IQ + ++ R R+ + +RYF+C E+G GR HYH I +D
Sbjct 59 FASLKAKIQAYQRKKRWANQRV-HATSLRYFWCREFGKMYGRKHYHVILL-LNKDTWCSL 116
Query 186 GALSNIWNVVKMIEKAW 202
G S ++ MI++AW
Sbjct 117 GDFSEPSSLATMIQEAW 133
> ect:ECIAI39_4232 hypothetical protein
Length=243
Score = 40.8 bits (94), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (51%), Gaps = 7/77 (9%)
Query 131 YGVFKEEIQLFMKRLRIRLDRLGYKHQIRYFFCSEYGSKSGRPHYHAIFWNFPRD----- 185
+ K +IQ + ++ R R+ + +RYF+C E+G GR HYH I +D
Sbjct 59 FASLKAKIQAYQRKKRWANQRV-HATSLRYFWCREFGKMYGRKHYHVILL-LNKDTWCSL 116
Query 186 GALSNIWNVVKMIEKAW 202
G S ++ MI++AW
Sbjct 117 GDFSEPSSLATMIQEAW 133
> ecz:ECS88_4652 hypothetical protein
Length=243
Score = 40.4 bits (93), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 9/78 (12%)
Query 131 YGVFKEEIQLFMKRLRIRLDRLGYKHQIRYFFCSEYGSKSGRPHYHAIF------WNFPR 184
+ K +IQ + + R R ++ +RYF+C E+G + GR HYH I W P
Sbjct 59 FASLKAKIQAYQRHKR-RANKRVRATTLRYFWCREFGKEKGRKHYHVILLLNKDTWCSPG 117
Query 185 DGALSNIWNVVKMIEKAW 202
D + + ++ +I+ AW
Sbjct 118 DFTVPS--SLATLIQLAW 133
> ecq:ECED1_3481 hypothetical protein
Length=243
Score = 40.4 bits (93), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 9/78 (12%)
Query 131 YGVFKEEIQLFMKRLRIRLDRLGYKHQIRYFFCSEYGSKSGRPHYHAIF------WNFPR 184
+ K +IQ + + R R ++ +RYF+C E+G + GR HYH I W P
Sbjct 59 FASLKAKIQAYQRHKR-RANKRVRATTLRYFWCREFGKEKGRKHYHVILLLNKDTWCSPG 117
Query 185 DGALSNIWNVVKMIEKAW 202
D + + ++ +I+ AW
Sbjct 118 DFTVPS--SLATLIQLAW 133
> ecv:APECO1_2309 hypothetical protein
Length=243
Score = 40.4 bits (93), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 9/78 (12%)
Query 131 YGVFKEEIQLFMKRLRIRLDRLGYKHQIRYFFCSEYGSKSGRPHYHAIF------WNFPR 184
+ K +IQ + + R R ++ +RYF+C E+G + GR HYH I W P
Sbjct 59 FASLKAKIQAYQRHKR-RANKRVRATTLRYFWCREFGKEKGRKHYHVILLLNKDTWCSPG 117
Query 185 DGALSNIWNVVKMIEKAW 202
D + + ++ +I+ AW
Sbjct 118 DFTVPS--SLATLIQLAW 133
> senn:SN31241_6720 Intergenic-region protein
Length=243
Score = 40.0 bits (92), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 9/78 (12%)
Query 131 YGVFKEEIQLFMKRLRIRLDRLGYKHQIRYFFCSEYGSKSGRPHYHAIF------WNFPR 184
+ K +IQ + + R R ++ +RYF+C E+G + GR HYH I W P
Sbjct 59 FASLKAKIQAYQRHKR-RANKRVRATTLRYFWCREFGKEKGRKHYHVILLLNKDTWCSPG 117
Query 185 DGALSNIWNVVKMIEKAW 202
D + + ++ +I+ AW
Sbjct 118 DFTVPS--SLATLIKLAW 133
> ecw:EcE24377A_3395 hypothetical protein
Length=243
Score = 39.7 bits (91), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 7/77 (9%)
Query 131 YGVFKEEIQLFMKRLRIRLDRLGYKHQIRYFFCSEYGSKSGRPHYHAIFWNFPRD----- 185
+ K +IQ + ++ R R+ + +RYF+C E+G GR HYH I +D
Sbjct 59 FASLKAKIQAYQRKKRCANQRV-HATSLRYFWCREFGKMYGRKHYHVILL-LNKDTWCSL 116
Query 186 GALSNIWNVVKMIEKAW 202
G S ++ MI +AW
Sbjct 117 GDFSEPSSLATMILEAW 133
> ecc:c4558 hypothetical protein
Length=243
Score = 39.7 bits (91), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 23/75 (31%), Positives = 38/75 (51%), Gaps = 9/75 (12%)
Query 134 FKEEIQLFMKRLRIRLDRLGYKHQIRYFFCSEYGSKSGRPHYHAIF------WNFPRDGA 187
K +IQ + + R R ++ +RYF+C E+G + GR HYH I W P D
Sbjct 62 LKAKIQAYQRHKR-RANKRVRATTLRYFWCREFGKEKGRKHYHVILLLNKDTWCSPGDFT 120
Query 188 LSNIWNVVKMIEKAW 202
+ + ++ +I+ AW
Sbjct 121 VPS--SLATLIQLAW 133
> elo:EC042_3214 hypothetical protein
Length=243
Score = 39.7 bits (91), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 7/77 (9%)
Query 131 YGVFKEEIQLFMKRLRIRLDRLGYKHQIRYFFCSEYGSKSGRPHYHAIFWNFPRD----- 185
+ K +IQ + ++ R R+ + +RYF+C E+G GR HYH I +D
Sbjct 59 FASLKAKIQAYQRKKRCANQRV-HATSLRYFWCREFGKMYGRKHYHVILL-LNKDTWCSL 116
Query 186 GALSNIWNVVKMIEKAW 202
G S ++ MI +AW
Sbjct 117 GDFSEPSSLATMILEAW 133
> sri:SELR_11130 hypothetical protein
Length=288
Score = 39.7 bits (91), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 35/127 (28%), Positives = 58/127 (46%), Gaps = 30/127 (24%)
Query 117 IFVTLTYNNKHLPKYGVFKEEIQLFMKRLRIRLDRLGYKHQ------IRYFFCSEYGSKS 170
+ VT+TY++++ P ++++ MK + + RL Y +RY +E G+ +
Sbjct 75 LHVTVTYDDENRPA------DLKMAMKAVENYIRRLNYTRSKAGLSSVRYVCVTEEGATN 128
Query 171 GRPHYHAIFWNFPRDGALSNIWNVVKMIEKAWSYNGEPLGFAYA---VPCDKGAIGYVMK 227
GR H+H I DG L +EK W LG+ A P K I ++
Sbjct 129 GRIHHHFIM-----DGDLDR-----DTVEKRWG-----LGYCNADRIQPNRKNDIAPLIG 173
Query 228 YMSKIPR 234
Y+SK P+
Sbjct 174 YLSKDPK 180
> rus:RBI_I01590 hypothetical phage protein
Length=271
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/69 (35%), Positives = 35/69 (51%), Gaps = 6/69 (9%)
Query 113 TSIPIFVTLTYNNKHLPKYGVFKEEIQLFMKRLRIRLDRLGYKH---QIRYFFCSEYGSK 169
TS + + LTYN HLP E ++ + RL R KH ++Y +E GS+
Sbjct 63 TSSDLCIHLTYNGDHLPGN---DEAVKKQFRNFIARLKRYRKKHGLPSLKYMSVTERGSR 119
Query 170 SGRPHYHAI 178
+GR H+H I
Sbjct 120 NGRYHHHTI 128
> eck:EC55989_4880 hypothetical protein
Length=243
Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 38/75 (51%), Gaps = 9/75 (12%)
Query 134 FKEEIQLFMKRLRIRLDRLGYKHQIRYFFCSEYGSKSGRPHYHAIF------WNFPRDGA 187
K +IQ + ++ R R ++ + YF+C E+G + GR HYH I W P D
Sbjct 62 LKAKIQAYQRKKR-RTNKRVRATTLHYFWCREFGKEKGRKHYHVILLLNKDTWCSPGDFT 120
Query 188 LSNIWNVVKMIEKAW 202
+ + ++ +I+ AW
Sbjct 121 VPS--SLATLIQLAW 133
> eab:ECABU_c49190 hypothetical protein
Length=243
Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 38/78 (49%), Gaps = 9/78 (12%)
Query 131 YGVFKEEIQLFMKRLRIRLDRLGYKHQIRYFFCSEYGSKSGRPHYHAIF------WNFPR 184
+ K +IQ + + R R ++ + YF+C E+G + GR HYH I W P
Sbjct 59 FASLKAKIQAYQRHKR-RANKRVRATTLHYFWCREFGKEKGRKHYHVILLLNKDTWCSPG 117
Query 185 DGALSNIWNVVKMIEKAW 202
D + + ++ +I+ AW
Sbjct 118 DFTVPS--SLATLIQLAW 133
> elu:UM146_22130 hypothetical protein
Length=243
Score = 37.7 bits (86), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 38/75 (51%), Gaps = 9/75 (12%)
Query 134 FKEEIQLFMKRLRIRLDRLGYKHQIRYFFCSEYGSKSGRPHYHAIF------WNFPRDGA 187
K +IQ + ++ R R ++ + YF+C E+G + GR HYH I W P D
Sbjct 62 LKAKIQAYQRKKR-RANKRVRATTLHYFWCREFGKEKGRKHYHVILLLNKDTWCSPGDFT 120
Query 188 LSNIWNVVKMIEKAW 202
+ + ++ +I+ AW
Sbjct 121 VPS--SLATLIKLAW 133
> eci:UTI89_C4981 hypothetical protein
Length=243
Score = 37.7 bits (86), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 38/75 (51%), Gaps = 9/75 (12%)
Query 134 FKEEIQLFMKRLRIRLDRLGYKHQIRYFFCSEYGSKSGRPHYHAIF------WNFPRDGA 187
K +IQ + ++ R R ++ + YF+C E+G + GR HYH I W P D
Sbjct 62 LKAKIQAYQRKKR-RANKRVRATTLHYFWCREFGKEKGRKHYHVILLLNKDTWCSPGDFT 120
Query 188 LSNIWNVVKMIEKAW 202
+ + ++ +I+ AW
Sbjct 121 VPS--SLATLIKLAW 133
> ecp:ECP_4622 hypothetical protein
Length=243
Score = 37.7 bits (86), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 38/75 (51%), Gaps = 9/75 (12%)
Query 134 FKEEIQLFMKRLRIRLDRLGYKHQIRYFFCSEYGSKSGRPHYHAIF------WNFPRDGA 187
K +IQ + ++ R R ++ + YF+C E+G + GR HYH I W P D
Sbjct 62 LKAKIQAYQRKKR-RANKRVRATTLHYFWCREFGKEKGRKHYHVILLLNKDTWCSPGDFT 120
Query 188 LSNIWNVVKMIEKAW 202
+ + ++ +I+ AW
Sbjct 121 VPS--SLATLIKLAW 133
> seh:SeHA_C4689 hypothetical protein
Length=243
Score = 37.7 bits (86), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 38/78 (49%), Gaps = 9/78 (12%)
Query 131 YGVFKEEIQLFMKRLRIRLDRLGYKHQIRYFFCSEYGSKSGRPHYHAIF------WNFPR 184
+ K +IQ + + R R ++ + YF+C E+G + GR HYH I W P
Sbjct 59 FASLKAKIQAYQRHKR-RANKRVRATTLHYFWCREFGKEKGRKHYHVILLLNKDTWCSPG 117
Query 185 DGALSNIWNVVKMIEKAW 202
D + + ++ +I+ AW
Sbjct 118 DFTVPS--SLATLIKLAW 133
> ecm:EcSMS35_3198 hypothetical protein
Length=243
Score = 37.7 bits (86), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 17/46 (37%), Positives = 26/46 (57%), Gaps = 1/46 (2%)
Query 134 FKEEIQLFMKRLRIRLDRLGYKHQIRYFFCSEYGSKSGRPHYHAIF 179
K +IQ + + R R ++ +RYF+C E+G + GR HYH I
Sbjct 62 LKAKIQAYQRHKR-RANKRVRATTLRYFWCREFGKEKGRKHYHVIL 106
> pse:NH8B_2279 putative phage replication protein
Length=351
Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 59/140 (42%), Gaps = 22/140 (16%)
Query 118 FVTLTYNN--KHLPKYGVFKEEIQLFMKRLRIRLDRLGYKHQIRYFFCSEYGSKSGRPHY 175
+TLTY + + P++ + ++RLR L R G K RY + E +K GRPHY
Sbjct 93 MLTLTYRDDVEWSPRH------VSDLLERLRKWLKRRGVK-ACRYVWVLEL-TKRGRPHY 144
Query 176 HAIFWNFPRDGALSNIWNVVKMIEKAWSYNGEPLGFAYAVPCDKGAIGYVMKYMSKIPRI 235
H I W L + K ++ W +G + K +GY+ KY SK +
Sbjct 145 HLIVW-------LPKGLTMPKPDKQGWWPHG-----MTKIEWAKRPVGYLAKYASKGQNV 192
Query 236 PDNMNNVFFLSSRKDGGIGA 255
N + + G+G
Sbjct 193 DAEGNELRMPDGARIYGVGG 212
> lsp:Bsph_3782 hypothetical protein
Length=310
Score = 37.7 bits (86), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/83 (28%), Positives = 48/83 (58%), Gaps = 8/83 (10%)
Query 117 IFVTLTYNNKHLPK-YGVFKEEIQLFMKRLRIRLDRLG--YKHQIRYFFCSEYGSKSG-- 171
+++T TY++KH+PK Y K+++ +KR++ L + +++Y + +E+ +++G
Sbjct 103 LYMTYTYSDKHVPKDYEQAKKDMSNLIKRMKYWLKKQEKYADFELKYLYTTEH-TRNGQK 161
Query 172 -RPHYHAIFWNFPRDGALSNIWN 193
R H+H + NFP +WN
Sbjct 162 VRAHHHMVT-NFPDREVAEELWN 183
> elh:ETEC_3936 hypothetical protein
Length=243
Score = 37.4 bits (85), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 9/75 (12%)
Query 134 FKEEIQLFMKRLRIRLDRLGYKHQIRYFFCSEYGSKSGRPHYHAIF------WNFPRDGA 187
K +IQ + + R R ++ + YF+C E+G + GR HYH I W P D
Sbjct 62 LKAKIQAYQRHKR-RANKRVRATTLHYFWCREFGKEKGRKHYHVILLLNKDTWCSPGDFT 120
Query 188 LSNIWNVVKMIEKAW 202
+ + ++ +I+ AW
Sbjct 121 VPS--SLATLIQLAW 133
> sta:STHERM_c12000 hypothetical protein
Length=248
Score = 37.4 bits (85), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 47/110 (43%), Gaps = 15/110 (14%)
Query 44 WKYRFPEWLFSARKCGVTLDNIDDFQIINLRTGEISPMFMAVPCGKCILCRDKKKREWSF 103
W YR LF + + +F + RT EI+ F +P R+K R W+
Sbjct 11 WTYRHWAGLFYPEDLPSS--QLLEFYSRHFRTVEINSSFYHLP-------REKTCRNWAG 61
Query 104 RATCENVFSTSIPIFVTLTYNNKHLPKYGVFKEEIQLFMKRLRIRLDRLG 153
R +FS +T HL K G +EEI+ F+ R + DRLG
Sbjct 62 RVPEGFLFSMKASRVIT------HLRKLGDVEEEIERFLSRAALLGDRLG 105
> rsd:TGRD_578 hypothetical protein
Length=175
Score = 36.2 bits (82), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 31/52 (60%), Gaps = 6/52 (12%)
Query 126 KHLPKYGVFKE-EIQLFMKRLRIRLDRLGYKH--QIRYFFCSEYGSKSGRPH 174
+ L KY F++ ++Q F+K LR D L Y +IR F+C EYG+ RPH
Sbjct 123 RELNKYSTFRKLDVQTFIKDLR---DYLSYHRNLKIRCFYCGEYGNILDRPH 171
> vcn:VOLCADRAFT_93739 hypothetical protein
Length=677
Score = 37.4 bits (85), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 5/78 (6%)
Query 18 KDLLPVFGSYRTPNGLYDLTPSQSHTWKYRFPEWLFSARKCGVTLDNIDDFQIINLRTGE 77
KDL +F +R N L + TP TW + PE + +TL I+ R+G
Sbjct 41 KDLAKIFQGWRGVNKLSEPTPHHFFTWYWSRPEAMHH-----LTLKQRQQLLILTARSGS 95
Query 78 ISPMFMAVPCGKCILCRD 95
+ + A+ C L D
Sbjct 96 LENLQAAIMAAGCCLVED 113
> phd:102319745 RPGR; retinitis pigmentosa GTPase regulator
Length=581
Score = 37.4 bits (85), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 57/114 (50%), Gaps = 8/114 (7%)
Query 257 YARRLMPFYRANSQCLDITVCDPYSGMSTTVTLPEYFK-RLYYPANSSVLSKEVRDAFKK 315
++ L+PF + S L+ T+C+ + M P+YF+ ++ ++ LS E ++ +
Sbjct 396 FSPHLIPFSMSASNLLEKTICENENSMPPME--PDYFQHKMTKEKDTDSLSAEDSESLGE 453
Query 316 LCDCISDRYTIHCAGNYTDKLRFSDIEKK---VLRKYSFLSPKICKYPIGKKMD 366
D ++ + +H N +KL+ S I+K+ L K + L + KY KK D
Sbjct 454 TADVLNMTHMLHL--NSNEKLKLSPIQKQKDHELFKNADLVEETDKYTERKKKD 505
Lambda K H a alpha
0.325 0.140 0.448 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 947274830776