bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: all_orgs
14,240,465 sequences; 5,121,972,263 total letters
Query= Contig-9_CDS_annotation_glimmer3.pl_2_3
Length=561
Score E
Sequences producing significant alignments: (Bits) Value
ava:Ava_2310 phospholipid/glycerol acyltransferase 41.6 0.44
xtr:780137 lmod3; leiomodin 3 (fetal) 40.4 1.1
serr:Ser39006_3080 UPF0061 protein ydiU 38.5 4.5
ana:all5052 hypothetical protein 38.1 5.0
> ava:Ava_2310 phospholipid/glycerol acyltransferase
Length=458
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 31/115 (27%), Positives = 53/115 (46%), Gaps = 8/115 (7%)
Query 385 LRSIYSMSSRSVEDFLSIENQLYTCYYYARLESPTTDVRSDDLFDSDCMRLYRLFSCVGK 444
L S+Y E LS+ Q YT +Y+ +L SP T+ SD+ ++ +RL L + +
Sbjct 242 LESLYPRLLTLAEHLLSLMEQFYTRFYHLKL-SPVTEGASDNRNEALKLRLQALLNAALE 300
Query 445 FI-SFWDITPSSSYEYIYRTVDLSKWYYSRLSYHMLRSQYTDLVGLVDLDEELVD 498
++++ P R V+ + W Y + R Y D+ GL ++ L D
Sbjct 301 IAEQYFNLQPKGQLSDRCRRVEQAGWNY------IFREDYKDIKGLSAVERALGD 349
> xtr:780137 lmod3; leiomodin 3 (fetal)
Length=611
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/130 (27%), Positives = 59/130 (45%), Gaps = 31/130 (24%)
Query 273 KPYSRFSNGFATSCFFDAKEAVRDSISRPIEETPLSPFLNGVPSLINGKLLAIRPPRSV- 331
K SN TS D IS P+E TP P N NGK+ + P+ +
Sbjct 194 KTVQEISNSVQTS----------DDISDPVENTPEKPPENKP----NGKVGKLNLPKKLT 239
Query 332 VDSCFLRYACNGRLSSHELYWLVRSVSTTLSRSFQTVRRDNPDATLMDVCRLHLRSIYSM 391
+DS F++ + R S ++ T L ++ Q++R +NP DV ++L +I ++
Sbjct 240 LDSSFIKMSA--RPSGNQ---------TNLDKTLQSIRENNP-----DVKEVNLNNIENI 283
Query 392 SSRSVEDFLS 401
+ DF++
Sbjct 284 PKEMLVDFVN 293
> serr:Ser39006_3080 UPF0061 protein ydiU
Length=483
Score = 38.5 bits (88), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 25/113 (22%), Positives = 51/113 (45%), Gaps = 6/113 (5%)
Query 52 SLQKSLSKYTYFINPSYDQKYVPKCQIFKVHPDDPDSTLYELVVKPRRRGDYKMVQKVYS 111
+LQ++L +Y + ++ ++ K +F V +D D + L + R + DY ++ S
Sbjct 312 TLQRALERYEPVLMQAFGERMRAKLGLFTVQAEDNDILVGLLRLMQREKADYTRTFRLLS 371
Query 112 KKYKKVIKKEVDAPLSYTDDFSYYFNA------SEEYIRDFREQATLNVNGKY 158
++ ++ + F +FN E+Y R+Q ++VN KY
Sbjct 372 ATEQQSVQSPLRDEFIDRPVFDQWFNTYRRRLMIEDYDDSHRQQVMMSVNPKY 424
> ana:all5052 hypothetical protein
Length=458
Score = 38.1 bits (87), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 28/104 (27%), Positives = 49/104 (47%), Gaps = 8/104 (8%)
Query 396 VEDFLSIENQLYTCYYYARLESPTTDVRSDDLFDSDCMRLYRLFSCVGKFI-SFWDITPS 454
E LS+ Q YT +Y+ +L SP T+ SD+ ++ +RL L + + ++++ P
Sbjct 253 AEHLLSLMEQFYTRFYHLKL-SPVTEGLSDNRNEALKLRLQALLNASLEIAEQYFNLQPK 311
Query 455 SSYEYIYRTVDLSKWYYSRLSYHMLRSQYTDLVGLVDLDEELVD 498
R V+ + W Y + R Y D+ GL ++ L D
Sbjct 312 GQLSDRCRRVEQAGWNY------IFREDYKDIKGLSAVERALGD 349
Lambda K H a alpha
0.322 0.137 0.418 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 1271755612608