bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: all_orgs
           14,240,465 sequences; 5,121,972,263 total letters





Query= Contig-9_CDS_annotation_glimmer3.pl_2_7

Length=157
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  bmd:BMD_1109  asparagine synthetase (EC:6.3.5.4)                    36.6    1.4
  pfc:PflA506_2690  membrane protein                                  35.4    3.9
  nmu:Nmul_A1213  HhH-GPD                                             34.3    8.7


> bmd:BMD_1109  asparagine synthetase (EC:6.3.5.4)
Length=248

 Score = 36.6 bits (83),  Expect = 1.4, Method: Compositional matrix adjust.
 Identities = 15/37 (41%), Positives = 22/37 (59%), Gaps = 0/37 (0%)

Query  53  KSIIGYVPRYIAYKTDIDCVDGAFLTSLTSWVTPLTI  89
           KSI+ ++ RY A  +   C D  FL S T W+TP ++
Sbjct  20  KSILKHLQRYYADSSSFWCKDSVFLGSHTRWITPESV  56


> pfc:PflA506_2690  membrane protein
Length=540

 Score = 35.4 bits (80),  Expect = 3.9, Method: Composition-based stats.
 Identities = 19/61 (31%), Positives = 35/61 (57%), Gaps = 2/61 (3%)

Query  77   LTSLTSWVTPLTIDEIVTKISLGSGTGPFTPNYGLFKVSPYVLDSIFVSQCDSTVDTDQF  136
            +TSLT+W+ P  +   +  + +   T P++P +GL  ++  +L S F+S+  + V  DQ 
Sbjct  88   VTSLTAWL-PTAVASALIVVLVYRLTAPYSPRWGLLSIAMLLLSSTFISETRA-VSLDQM  145

Query  137  L  137
            L
Sbjct  146  L  146


> nmu:Nmul_A1213  HhH-GPD
Length=297

 Score = 34.3 bits (77),  Expect = 8.7, Method: Compositional matrix adjust.
 Identities = 15/34 (44%), Positives = 20/34 (59%), Gaps = 0/34 (0%)

Query  80   LTSWVTPLTIDEIVTKISLGSGTGPFTPNYGLFK  113
            L +WV  L +D I  K+    G GP+T NYGL +
Sbjct  204  LDAWVETLPVDVIREKLEAVRGIGPWTVNYGLLR  237



Lambda      K        H        a         alpha
   0.319    0.139    0.416    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 126285309131