BLASTP 2.2.24 [Aug-08-2010]
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eace_0395_orf2
(281 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
14,777,732 sequences; 5,058,227,080 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|118490764|ref|XP_001238691.1| hypothetical protein [Eimeria t... 45 0.011
gi|118490816|ref|XP_001238717.1| hypothetical protein [Eimeria t... 40 0.43
gi|321477630|gb|EFX88588.1| hypothetical protein DAPPUDRAFT_3108... 39 1.0
gi|118490798|ref|XP_001238708.1| hypothetical protein [Eimeria t... 38 1.5
gi|118490772|ref|XP_001238695.1| hypothetical protein [Eimeria t... 37 2.9
gi|212721162|ref|NP_001131503.1| hypothetical protein LOC1001928... 37 4.7
gi|118490788|ref|XP_001238703.1| hypothetical protein [Eimeria t... 36 6.7
>gi|118490764|ref|XP_001238691.1| hypothetical protein [Eimeria tenella]
gi|109238474|emb|CAK51438.1| hypothetical protein e2017b09.tmp0041 [Eimeria tenella]
Length = 1009
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 69/156 (44%), Gaps = 7/156 (4%)
Query: 17 LTMFAQLIRDIQGTWGTPVSLPRGKAIQQIEANLAISTGALKHYGAVLEGLVRLTELLRG 76
L +L+ +I+ W P K +++ + +A + LK+ +VL+GL E
Sbjct: 284 LRELIRLVNEIKQPWYVKQEKPPDKYKKKMISIMATADVILKNCMSVLQGLRVFHEDSSQ 343
Query: 77 K--PPAVVVEQQLRVLEALCNIRSIQVARETAXXXXXXXXXXXXXXXXXXDIGFMTPEHK 134
K PP VVV QQL V++AL ++ + VAR+ +
Sbjct: 344 KKLPPEVVV-QQLEVIKALYHVHANYVARDGSLRAHMLECQKRTRVYALFRHEHYELSRG 402
Query: 135 RLQPLAVALHELEHAVASAGGIFVPPQ----RHPHG 166
R+ P+ H+++ AV +AGG+ P Q H HG
Sbjct: 403 RIVPVKELYHQVDEAVRAAGGLLQPEQASAWEHEHG 438
>gi|118490816|ref|XP_001238717.1| hypothetical protein [Eimeria tenella]
gi|109238500|emb|CAK51464.1| hypothetical protein e2017b09.tmp0281 [Eimeria tenella]
Length = 1461
Score = 40.0 bits (92), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 47/101 (46%)
Query: 57 LKHYGAVLEGLVRLTELLRGKPPAVVVEQQLRVLEALCNIRSIQVARETAXXXXXXXXXX 116
LK+ VL+GL++ + + PP VV+QQL V++AL + S +AR+
Sbjct: 1080 LKYCLGVLDGLLQRSYGQQSAPPEAVVQQQLNVIKALYRVHSDHIARDAEVCEHILRTQQ 1139
Query: 117 XXXXXXXXDIGFMTPEHKRLQPLAVALHELEHAVASAGGIF 157
D + + + L ++++ AV SAGG+
Sbjct: 1140 QTGIYELLDSQQASLNNVSISKLVQLKNKIKDAVRSAGGLL 1180
>gi|321477630|gb|EFX88588.1| hypothetical protein DAPPUDRAFT_310813 [Daphnia pulex]
Length = 558
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 29/57 (50%)
Query: 41 KAIQQIEANLAISTGALKHYGAVLEGLVRLTELLRGKPPAVVVEQQLRVLEALCNIR 97
K I + +N A+ST K G V+EG V+L R A V E R ++ LCN R
Sbjct: 291 KGISTVISNQAVSTVPHKKRGCVVEGEVQLNYFTRYSQSACVAECTTRKMQRLCNCR 347
>gi|118490798|ref|XP_001238708.1| hypothetical protein [Eimeria tenella]
gi|109238491|emb|CAK51455.1| hypothetical protein e2017b09.tmp0201 [Eimeria tenella]
Length = 721
Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 52/113 (46%), Gaps = 3/113 (2%)
Query: 57 LKHYGAVLEGLVRL-TELLRGKPPAVVVEQQLRVLEALCNIRSIQVARETAXXXXXXXXX 115
+K+ VL+GL+RL T+ + P+ VVEQQL VL+ + + S VA++
Sbjct: 339 MKNCLGVLKGLLRLRTDTSEKRLPSKVVEQQLSVLKTVYHTHSYYVAKDGTLRLHILESQ 398
Query: 116 XXXXXXXXXDIGFMTPEHKRLQPLAVALHELEHAVASAGGIFVPPQRHPHGGQ 168
+ + PL +E++ AV +AGG+ P + P G+
Sbjct: 399 KSTAVFSLLGTQHFSVFQGVIAPLKDLQNEIDEAVRAAGGLL--PSQEPETGE 449
>gi|118490772|ref|XP_001238695.1| hypothetical protein [Eimeria tenella]
gi|109238478|emb|CAK51442.1| hypothetical protein e2017b09.tmp0075 [Eimeria tenella]
Length = 747
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 50/118 (42%), Gaps = 1/118 (0%)
Query: 50 LAISTGALKHYGAVLEGLVRLTELLRGKP-PAVVVEQQLRVLEALCNIRSIQVARETAXX 108
LA + LK+ VL+GL L E K P VVEQQL V++ + ++ + +AR+
Sbjct: 318 LATAEMVLKNCLRVLDGLALLRENTSAKKLPPQVVEQQLNVMKWMYDVHADHIARDGCLR 377
Query: 109 XXXXXXXXXXXXXXXXDIGFMTPEHKRLQPLAVALHELEHAVASAGGIFVPPQRHPHG 166
D + + PL +++ A+ +AGG+ Q P G
Sbjct: 378 AHIIECQKRTRVFALLDRECFSVATAVILPLKELQNQITEAIRAAGGLLPSQQTPPRG 435
>gi|212721162|ref|NP_001131503.1| hypothetical protein LOC100192840 [Zea mays]
gi|194691710|gb|ACF79939.1| unknown [Zea mays]
Length = 303
Score = 36.6 bits (83), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 4/91 (4%)
Query: 13 FIVQLTMFAQLIRDIQGTWGTPVSLPRGKAIQQIEANLAISTGALKHYGAVLEGLVRL-- 70
FIV++ F ++R Q T + LP + + + A+ T + H V+E L RL
Sbjct: 175 FIVKVFAFFHIVRSQQETRVNNL-LPPAEPELISDDHPAVETFNVDHISPVIERLQRLEG 233
Query: 71 -TELLRGKPPAVVVEQQLRVLEALCNIRSIQ 100
+ L KPPA+ VE++ +LE+ I+ I+
Sbjct: 234 KVDELGSKPPAIPVEKERSLLESWDRIKCIE 264
>gi|118490788|ref|XP_001238703.1| hypothetical protein [Eimeria tenella]
gi|109238486|emb|CAK51450.1| hypothetical protein e2017b09.tmp0155 [Eimeria tenella]
Length = 718
Score = 35.8 bits (81), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 61/123 (49%), Gaps = 11/123 (8%)
Query: 41 KAIQQIEANLAISTGALKHYGAVLEGLVRL-TELLRGKPPAVVVEQQLRVLEALCNIRSI 99
K +++ A LA + ALK+ VL GL++L ++ G+ P +VEQQ+ VL+++ + +
Sbjct: 315 KYKRKMIAILATAEVALKNCLGVLNGLLQLRQDISGGQLPPQIVEQQIEVLKSIFRVHAD 374
Query: 100 QVARETAXXXXXXXXXXXXXXXXXXDIGFMTPEHKRLQPLAVA-----LHELEHAVASAG 154
+AR+ + +T +H ++ A+A ++ + AV +AG
Sbjct: 375 HLARDGSLRQHILHCQKRTGV-----YALLTADHFKVSSDAIAPVKELINRILEAVRAAG 429
Query: 155 GIF 157
G+
Sbjct: 430 GLL 432
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
Posted date: Jul 22, 2011 4:42 PM
Number of letters in database: 5,058,227,080
Number of sequences in database: 14,777,732
Lambda K H
0.314 0.128 0.367
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 14777732
Number of Hits to DB: 2,380,413,738
Number of extensions: 79614300
Number of successful extensions: 200275
Number of sequences better than 10.0: 25
Number of HSP's gapped: 202771
Number of HSP's successfully gapped: 25
Length of query: 281
Length of database: 5,058,227,080
Length adjustment: 137
Effective length of query: 144
Effective length of database: 3,033,677,796
Effective search space: 436849602624
Effective search space used: 436849602624
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 80 (35.4 bits)