BLASTP 2.2.24 [Aug-08-2010]
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eten_1054_orf1
(159 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
14,777,732 sequences; 5,058,227,080 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|325120018|emb|CBZ55571.1| conserved hypothetical protein [Neo... 89 2e-16
gi|221481870|gb|EEE20240.1| conserved hypothetical protein [Toxo... 84 9e-15
gi|221502368|gb|EEE28101.1| conserved hypothetical protein [Toxo... 84 9e-15
gi|237843267|ref|XP_002370931.1| hypothetical protein TGME49_016... 84 9e-15
gi|325188814|emb|CCA23343.1| U3 small nucleolar RNAassociated pr... 52 4e-05
gi|307109574|gb|EFN57812.1| hypothetical protein CHLNCDRAFT_5111... 40 0.13
gi|302794196|ref|XP_002978862.1| hypothetical protein SELMODRAFT... 38 0.61
gi|301119945|ref|XP_002907700.1| U3 small nucleolar RNA-associat... 37 0.63
gi|58270472|ref|XP_572392.1| hypothetical protein CNH02180 [Cryp... 37 0.76
gi|312217942|emb|CBX97889.1| predicted protein [Leptosphaeria ma... 36 1.6
gi|189242408|ref|XP_969008.2| PREDICTED: similar to CG4554 CG455... 36 1.7
gi|298205222|emb|CBI17281.3| unnamed protein product [Vitis vini... 35 2.4
gi|209881646|ref|XP_002142261.1| hypothetical protein [Cryptospo... 35 2.6
gi|221126608|ref|XP_002154873.1| PREDICTED: similar to down-regu... 35 3.5
gi|340716268|ref|XP_003396621.1| PREDICTED: small subunit proces... 35 5.3
gi|297802938|ref|XP_002869353.1| hypothetical protein ARALYDRAFT... 34 6.7
gi|225681130|gb|EEH19414.1| conserved hypothetical protein [Para... 34 7.6
>gi|325120018|emb|CBZ55571.1| conserved hypothetical protein [Neospora caninum Liverpool]
Length = 5715
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 91/162 (56%), Gaps = 19/162 (11%)
Query: 12 LWYQFLESCTQRLVGVKDSSLQALVLQTLMLCRELQHVVRPYFPVLEEALKTKGGAPSGL 71
LW + C QRLV + D SLQ LV+Q L L L+ + PY P+L + + K + + L
Sbjct: 2117 LWSRLPAVCAQRLVTIADVSLQQLVIQVLQLSPALRPELAPYAPLLLQLISEKSSS-NAL 2175
Query: 72 LRLVLGKAE---------VEHQLSQPSAETKEN--------VVLLNEHRSFMLPLIVRLL 114
LRL L ++E V+ ++P T+E VV+ +HR ++PL+VR+L
Sbjct: 2176 LRLRLTESEGEERKEASAVDGTQTKPETPTREKEKGTGAELVVVQEQHRHLIVPLVVRIL 2235
Query: 115 ISKIQTR-MGRSPGIVLANRRRIFGLLSSLEESEITMVLAVL 155
++K+Q R GRS V A RR +F LSS+ +E+ +++A+L
Sbjct: 2236 MAKVQHRAAGRSAAAVFAERRNVFAFLSSVAAAELPLLMAIL 2277
>gi|221481870|gb|EEE20240.1| conserved hypothetical protein [Toxoplasma gondii GT1]
Length = 5542
Score = 83.6 bits (205), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/158 (36%), Positives = 82/158 (51%), Gaps = 17/158 (10%)
Query: 6 ATEVKELWYQFLESCTQRLVGVKDSSLQALVLQTLMLCRELQHVVRPYFPVLEEALKTKG 65
A E + LW + C QRLV + D SLQ LV+Q L L L+ + PY P+L + + K
Sbjct: 2017 AAESERLWTRLPAVCAQRLVTIADPSLQQLVIQVLQLSPVLRPQLAPYAPLLAQLISDKS 2076
Query: 66 GAPSGLLRLVLGKAEVEHQ----LSQPSAETKEN-----------VVLLNEHRSFMLPLI 110
+ + LLRL L + E E + A TK VV+ +HR ++PL+
Sbjct: 2077 SS-NALLRLRLAEPEEEGEDDLATDDAQATTKRKNEQGKATVAKLVVVQEQHRHLVVPLV 2135
Query: 111 VRLLISKIQTR-MGRSPGIVLANRRRIFGLLSSLEESE 147
VR+L++K+Q R GRS V A RR +F LSS+ E
Sbjct: 2136 VRILMAKVQHRAAGRSATAVFAERRNVFAFLSSVAAQE 2173
>gi|221502368|gb|EEE28101.1| conserved hypothetical protein [Toxoplasma gondii VEG]
Length = 5542
Score = 83.6 bits (205), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/158 (36%), Positives = 82/158 (51%), Gaps = 17/158 (10%)
Query: 6 ATEVKELWYQFLESCTQRLVGVKDSSLQALVLQTLMLCRELQHVVRPYFPVLEEALKTKG 65
A E + LW + C QRLV + D SLQ LV+Q L L L+ + PY P+L + + K
Sbjct: 2017 AAESERLWTRLPAVCAQRLVTIADPSLQQLVIQVLQLSPVLRPQLAPYAPLLAQLISDKS 2076
Query: 66 GAPSGLLRLVLGKAEVEHQ----LSQPSAETKEN-----------VVLLNEHRSFMLPLI 110
+ + LLRL L + E E + A TK VV+ +HR ++PL+
Sbjct: 2077 SS-NALLRLRLAEPEEEGEDDLATDDAQATTKRKNEQGKATVAKLVVVQEQHRHLVVPLV 2135
Query: 111 VRLLISKIQTR-MGRSPGIVLANRRRIFGLLSSLEESE 147
VR+L++K+Q R GRS V A RR +F LSS+ E
Sbjct: 2136 VRILMAKVQHRAAGRSATAVFAERRNVFAFLSSVAAQE 2173
>gi|237843267|ref|XP_002370931.1| hypothetical protein TGME49_016210 [Toxoplasma gondii ME49]
gi|211968595|gb|EEB03791.1| hypothetical protein TGME49_016210 [Toxoplasma gondii ME49]
Length = 5542
Score = 83.6 bits (205), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/158 (36%), Positives = 82/158 (51%), Gaps = 17/158 (10%)
Query: 6 ATEVKELWYQFLESCTQRLVGVKDSSLQALVLQTLMLCRELQHVVRPYFPVLEEALKTKG 65
A E + LW + C QRLV + D SLQ LV+Q L L L+ + PY P+L + + K
Sbjct: 2017 AAESERLWTRLPAVCAQRLVTIADPSLQQLVIQVLQLSPVLRPQLAPYAPLLAQLISDKS 2076
Query: 66 GAPSGLLRLVLGKAEVEHQ----LSQPSAETKEN-----------VVLLNEHRSFMLPLI 110
+ + LLRL L + E E + A TK VV+ +HR ++PL+
Sbjct: 2077 SS-NALLRLRLAEPEEEGEDDLATDDAQATTKRKNEQGKATVAKLVVVQEQHRHLVVPLV 2135
Query: 111 VRLLISKIQTR-MGRSPGIVLANRRRIFGLLSSLEESE 147
VR+L++K+Q R GRS V A RR +F LSS+ E
Sbjct: 2136 VRILMAKVQHRAAGRSATAVFAERRNVFAFLSSVAAQE 2173
>gi|325188814|emb|CCA23343.1| U3 small nucleolar RNAassociated protein putative [Albugo laibachii
Nc14]
Length = 2780
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 53/85 (62%), Gaps = 3/85 (3%)
Query: 75 VLGKAEVEHQLSQPSAETKENVVLLNEHRSFMLPLIVRLLISKIQTRMGRSPGIVLANRR 134
V+ + L+ SA+ K+ V+L EHRS +LP++ RLL +K ++ GR+ G +ANRR
Sbjct: 852 VMQDSTFRDTLTMFSAQ-KDAGVVLQEHRSELLPVLCRLLYAKCVSKKGRNKGDTVANRR 910
Query: 135 -RIFGLLSSLEESEITMVLAVLTLR 158
I L++LE SE+ +A LT+R
Sbjct: 911 ATILTYLAALESSELAHFIA-LTVR 934
>gi|307109574|gb|EFN57812.1| hypothetical protein CHLNCDRAFT_51116 [Chlorella variabilis]
Length = 2897
Score = 39.7 bits (91), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 91 ETKENVVLLNEHRSFMLPLIVRLLISKIQTRMGR--SPGIVLANRRRIFGLLSSLEESEI 148
E + + LL EHR+ ++PL++RLL K++ R GR G + R I L++ E E+
Sbjct: 1149 EDEGKLALLAEHRAGVVPLLIRLLFPKMRKRSGRLGGKGAPGSARAAILNFLAAAEPGEL 1208
Query: 149 TMVL 152
+L
Sbjct: 1209 RPLL 1212
>gi|302794196|ref|XP_002978862.1| hypothetical protein SELMODRAFT_444016 [Selaginella moellendorffii]
gi|300153180|gb|EFJ19819.1| hypothetical protein SELMODRAFT_444016 [Selaginella moellendorffii]
Length = 2273
Score = 37.7 bits (86), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 35/65 (53%)
Query: 92 TKENVVLLNEHRSFMLPLIVRLLISKIQTRMGRSPGIVLANRRRIFGLLSSLEESEITMV 151
+KE+ + NEHR+ ++P++VR+L K+ R + R I LS LE E+
Sbjct: 748 SKEDQQVANEHRTELMPVLVRILYPKLSKRNAKLGKSASHMRSSILTFLSCLEAKELETF 807
Query: 152 LAVLT 156
+++T
Sbjct: 808 FSLIT 812
>gi|301119945|ref|XP_002907700.1| U3 small nucleolar RNA-associated protein, putative [Phytophthora
infestans T30-4]
gi|262106212|gb|EEY64264.1| U3 small nucleolar RNA-associated protein, putative [Phytophthora
infestans T30-4]
Length = 2932
Score = 37.4 bits (85), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 27/38 (71%)
Query: 97 VLLNEHRSFMLPLIVRLLISKIQTRMGRSPGIVLANRR 134
V+L EHR +LP+++R+L SK ++ GR+ G +A RR
Sbjct: 994 VVLREHRPELLPVLLRVLYSKCVSKKGRNNGDTVAARR 1031
>gi|58270472|ref|XP_572392.1| hypothetical protein CNH02180 [Cryptococcus neoformans var.
neoformans JEC21]
gi|134117938|ref|XP_772350.1| hypothetical protein CNBL2180 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50254963|gb|EAL17703.1| hypothetical protein CNBL2180 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57228650|gb|AAW45085.1| hypothetical protein CNH02180 [Cryptococcus neoformans var.
neoformans JEC21]
Length = 2638
Score = 37.4 bits (85), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 60/129 (46%), Gaps = 8/129 (6%)
Query: 32 LQALVLQTLMLCRELQHVVRPYFPVLEEALKTKGGAPSGLLRLVLGKAEVEHQLSQPSAE 91
LQ L L+ LM + + + PY LE L L RL LG ++ L+ +E
Sbjct: 923 LQGLALKCLMTYKSPK--LTPYEEPLENLL-VDSKFRDELARLRLGVDSQDYALAARDSE 979
Query: 92 ---TKENVVLLNEHRSFMLPLIVRLLISKIQTRMGRSPGIVLANRRR--IFGLLSSLEES 146
T VV+ HR LP+I+RLL I +R GRS R+ + L+ ES
Sbjct: 980 ATGTTRVVVIEPTHRDEALPVIIRLLYGVITSRRGRSSNSQGQGARKQAVLSALNGCSES 1039
Query: 147 EITMVLAVL 155
E+ +++ ++
Sbjct: 1040 ELGVLVDLM 1048
>gi|312217942|emb|CBX97889.1| predicted protein [Leptosphaeria maculans]
Length = 947
Score = 36.2 bits (82), Expect = 1.6, Method: Composition-based stats.
Identities = 32/98 (32%), Positives = 44/98 (44%), Gaps = 18/98 (18%)
Query: 57 LEEALKTKGGAPSGLLRLVLGKAEVEHQLSQPSAETKENVVLLNEHRSFMLPLIVRLLIS 116
L+E L+ G P R L K E++ L QPS T + + RS PLI
Sbjct: 327 LKETLQHLEGPPK---RGPLSKKELDEILRQPSPRTPSSTANGAKRRSISSPLI------ 377
Query: 117 KIQTRMGRSPGIVLANRRRIFGLLSSLEESEITMVLAV 154
R + PG + ANRRRI LEE+ + +L +
Sbjct: 378 ---ARTDQLPGSLRANRRRI------LEEAAKSTLLGL 406
>gi|189242408|ref|XP_969008.2| PREDICTED: similar to CG4554 CG4554-PA [Tribolium castaneum]
gi|270016279|gb|EFA12725.1| hypothetical protein TcasGA2_TC002360 [Tribolium castaneum]
Length = 2666
Score = 36.2 bits (82), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 54/123 (43%), Gaps = 26/123 (21%)
Query: 5 RATEVKELWYQFLESCTQRLVGVKDSSLQALVLQTLMLCRELQHVVRPYFPVLEEALKTK 64
R E+ +L++ FL+ K+S +Q L L +M + + PY L + K
Sbjct: 866 REPELAKLYFDFLQH--------KNSQVQKLALDCIMTYK--HKFLTPYKDHLYNLVDDK 915
Query: 65 GGAPSGLLRLVLGKAEVEHQLSQPSAETKENVVLLNEHRSFMLPLIVRLLISKIQTRMGR 124
+ L +++ KE+ + EHR ++PLI+R++ SK+ T+ G
Sbjct: 916 N------FKNELAAFQID----------KESGTIQEEHRDDLVPLIIRIVFSKMSTKTGL 959
Query: 125 SPG 127
G
Sbjct: 960 RTG 962
>gi|298205222|emb|CBI17281.3| unnamed protein product [Vitis vinifera]
Length = 2629
Score = 35.4 bits (80), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 31/144 (21%), Positives = 70/144 (48%), Gaps = 21/144 (14%)
Query: 15 QFLESCTQ-RLVGVKDSSLQALVLQTLMLCRELQHVVRPYFPVLEEALKTKGGAPSGLLR 73
QFL+ Q RL+ D+ +Q VL L+ ++ + + PY L+ + +K
Sbjct: 891 QFLKDVLQNRLLDENDAEIQMQVLDCLLFWKD--NFLLPYDQHLKNLISSKN-------- 940
Query: 74 LVLGKAEVEHQLSQPSAETKENVVLLNEHRSFMLPLIVRLLISKIQ--TRMGRSPGIVLA 131
+ +L+ S + N+V +HR+ ++P+++RLL+ K++ + +
Sbjct: 941 -------LREELTTWSLSRESNLVE-EQHRTCLVPVVIRLLVPKVRKLKTLASRKHTSVH 992
Query: 132 NRRRIFGLLSSLEESEITMVLAVL 155
+R+ + ++ L+ +E+ + A+L
Sbjct: 993 HRKAVLAFIAQLDVNELALFFAML 1016
>gi|209881646|ref|XP_002142261.1| hypothetical protein [Cryptosporidium muris RN66]
gi|209557867|gb|EEA07912.1| hypothetical protein, conserved [Cryptosporidium muris RN66]
Length = 3748
Score = 35.4 bits (80), Expect = 2.6, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 9/64 (14%)
Query: 101 EHRSFMLPLIVRLLISKI---------QTRMGRSPGIVLANRRRIFGLLSSLEESEITMV 151
EHR ++PL++RL++SK+ + R G + R+ +F LS L +EI ++
Sbjct: 1288 EHRLVVIPLVIRLILSKLSKSRECVGNKNRGGVKTINRKSGRKLLFSYLSQLPNNEIGLI 1347
Query: 152 LAVL 155
L++L
Sbjct: 1348 LSIL 1351
>gi|221126608|ref|XP_002154873.1| PREDICTED: similar to down-regulated in metastasis [Hydra
magnipapillata]
Length = 2543
Score = 35.0 bits (79), Expect = 3.5, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 93 KENVVLLNEHRSFMLPLIVRLLISKI--QTRMGRSPGIVLANRRRIFGLLSSLEESEITM 150
KEN VL EHRS ++P+++RLL K+ ++ +G S A R I LS+ ++ +
Sbjct: 852 KENEVLKEEHRSDLMPILIRLLYGKLLRKSGLGASGKSKSARRNVIMQFLSNCSKTSKDI 911
Query: 151 VLAV 154
+ V
Sbjct: 912 IYEV 915
>gi|340716268|ref|XP_003396621.1| PREDICTED: small subunit processome component 20 homolog [Bombus
terrestris]
Length = 2788
Score = 34.7 bits (78), Expect = 5.3, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 37/62 (59%), Gaps = 5/62 (8%)
Query: 93 KENVVLLNEHRSFMLPLIVRL----LISKIQTRMGRSPGIVLANRRRIFGLLSSLEESEI 148
KE+ ++L EHR+ +P+++R+ +I+K R G G L R+ I LS ++E+E+
Sbjct: 978 KESNIILEEHRNDFIPILMRIIYAKMIAKTGMRTGGKAGGTL-KRKMILRFLSGIQENEM 1036
Query: 149 TM 150
+
Sbjct: 1037 II 1038
>gi|297802938|ref|XP_002869353.1| hypothetical protein ARALYDRAFT_353720 [Arabidopsis lyrata subsp.
lyrata]
gi|297315189|gb|EFH45612.1| hypothetical protein ARALYDRAFT_353720 [Arabidopsis lyrata subsp.
lyrata]
Length = 2855
Score = 34.3 bits (77), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 64/144 (44%), Gaps = 25/144 (17%)
Query: 15 QFLESCTQ-RLVGVKDSSLQALVLQTLMLCRELQHVVRPYFPVLEEALKTKGGAPSGLLR 73
QFL Q R + D+ +Q VL+ L+L + + P+ L +K K LR
Sbjct: 871 QFLNDVLQNRFLDDNDAEIQTNVLECLLLTNDF---LLPHRQRLLNLIKPKE------LR 921
Query: 74 LVLGKAEVEHQLSQPSAETKENVVLLNEHRSFMLPLIVRLLISKIQT--RMGRSPGIVLA 131
L + + +P HRS++ L++R+L+ K++T + +
Sbjct: 922 EELTTWNLSEDIGEP-------------HRSYIFSLVIRILMPKVRTLKNLASRKHTSIR 968
Query: 132 NRRRIFGLLSSLEESEITMVLAVL 155
+R+ + +S L+ +E+ + A+L
Sbjct: 969 HRKAVLCFISQLDVNELALFFALL 992
>gi|225681130|gb|EEH19414.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Length = 2619
Score = 33.9 bits (76), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 75 VLGKAEVEHQLSQPSAETKENVVLLNEHRSFMLPLIVRLLISKIQTRMGR--SPGIVLAN 132
++ A +LS ++EN + +HR + PL++RLL K+ R G G
Sbjct: 947 IVDDARFRDELSVFVNASQENSTIKEDHRPDIFPLLLRLLYGKMVARGGSRGGQGTQEGR 1006
Query: 133 RRRIFGLLSSLEESEI 148
R+ I ++S L E++
Sbjct: 1007 RKTILRIISQLSENDF 1022
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
Posted date: Jul 22, 2011 4:42 PM
Number of letters in database: 5,058,227,080
Number of sequences in database: 14,777,732
Lambda K H
0.321 0.136 0.373
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 14777732
Number of Hits to DB: 1,338,575,586
Number of extensions: 46476034
Number of successful extensions: 113281
Number of sequences better than 10.0: 33
Number of HSP's gapped: 114545
Number of HSP's successfully gapped: 33
Length of query: 159
Length of database: 5,058,227,080
Length adjustment: 121
Effective length of query: 38
Effective length of database: 3,270,121,508
Effective search space: 124264617304
Effective search space used: 124264617304
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 76 (33.9 bits)