BLASTP 2.2.24 [Aug-08-2010]
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eten_1114_orf1
(213 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
14,777,732 sequences; 5,058,227,080 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|325117390|emb|CBZ52942.1| putative ATP-dependent nucleolar RN... 185 5e-45
gi|237831677|ref|XP_002365136.1| ATP-dependent nucleolar RNA hel... 183 2e-44
gi|221487015|gb|EEE25261.1| ATP-dependent nucleolar RNA helicase... 183 2e-44
gi|66359422|ref|XP_626889.1| Dbp9p, eIF4A-1-family RNA SFII heli... 154 6e-36
gi|67623801|ref|XP_668183.1| ENSANGP00000021948 [Cryptosporidium... 153 1e-35
gi|209882032|ref|XP_002142453.1| DEAD/DEAH box helicase family p... 138 4e-31
gi|154281927|ref|XP_001541776.1| hypothetical protein HCAG_03874... 114 9e-24
gi|270002128|gb|EEZ98575.1| hypothetical protein TcasGA2_TC00108... 112 3e-23
gi|195132612|ref|XP_002010737.1| GI21708 [Drosophila mojavensis]... 112 4e-23
gi|91077434|ref|XP_966623.1| PREDICTED: similar to ATP-dependent... 112 5e-23
gi|295674119|ref|XP_002797605.1| ATP-dependent RNA helicase DBP9... 111 6e-23
gi|225563337|gb|EEH11616.1| ATP-dependent RNA helicase DBP9 [Aje... 111 6e-23
gi|320035635|gb|EFW17576.1| ATP-dependent RNA helicase [Coccidio... 111 7e-23
gi|258565271|ref|XP_002583380.1| ATP-dependent helicase [Uncinoc... 111 8e-23
gi|225684674|gb|EEH22958.1| ATP-dependent RNA helicase dbp9 [Par... 111 8e-23
gi|303315147|ref|XP_003067581.1| ATP-dependent RNA helicase DBP9... 111 8e-23
gi|119190623|ref|XP_001245918.1| hypothetical protein CIMG_05359... 110 9e-23
gi|321462909|gb|EFX73929.1| hypothetical protein DAPPUDRAFT_1094... 110 1e-22
gi|240275931|gb|EER39444.1| ATP-dependent RNA helicase DBP9 [Aje... 110 1e-22
gi|325093293|gb|EGC46603.1| ATP-dependent RNA helicase DBP9 [Aje... 110 1e-22
gi|195173765|ref|XP_002027657.1| GL15985 [Drosophila persimilis]... 110 1e-22
gi|315051032|ref|XP_003174890.1| ATP-dependent RNA helicase DBP9... 110 2e-22
gi|51467996|ref|NP_001003876.1| probable ATP-dependent RNA helic... 109 2e-22
gi|95132450|gb|AAI16543.1| DEAD (Asp-Glu-Ala-Asp) box polypeptid... 109 2e-22
gi|239610502|gb|EEQ87489.1| ATP-dependent RNA helicase DBP9 [Aje... 109 2e-22
gi|326476368|gb|EGE00378.1| ATP-dependent RNA helicase DBP9 [Tri... 109 3e-22
gi|261195464|ref|XP_002624136.1| ATP-dependent RNA helicase DBP9... 109 3e-22
gi|242780444|ref|XP_002479596.1| ATP dependent RNA helicase (Dbp... 109 3e-22
gi|212526270|ref|XP_002143292.1| ATP dependent RNA helicase (Dbp... 108 4e-22
gi|156552886|ref|XP_001600943.1| PREDICTED: similar to DEAD box ... 108 5e-22
>gi|325117390|emb|CBZ52942.1| putative ATP-dependent nucleolar RNA helicase [Neospora caninum
Liverpool]
Length = 919
Score = 185 bits (469), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 88/162 (54%), Positives = 119/162 (73%), Gaps = 5/162 (3%)
Query: 1 DLLFAFGFENDTKRLLQLLPSTAARHYQTILVSATQNHELSQLQHLMLHKPLIIKIVEEE 60
DLL +FGFE++ RLL LP+TA RHYQ +LVSAT N E++QLQ ++LHK ++++I
Sbjct: 362 DLLLSFGFESEMARLLACLPATAERHYQALLVSATLNEEVAQLQQMLLHKAVMVEI---- 417
Query: 61 GSHADGSAASCISEFYFQVPTEAEKWLVAYAFLRLGLVPLKCLVFCKDVSSVYALRLFLD 120
A+S +SEFY +P +KW+V YAFL+L LVP KCL+F VSS YA+R+FL+
Sbjct: 418 -DDTLQQASSQLSEFYLSLPKPGDKWVVLYAFLKLDLVPRKCLIFTSGVSSAYAVRIFLE 476
Query: 121 RFGIASGVLSPTLPVAAREQQIQAFNQGLIDILITNDGQFME 162
RFGI+ GVLSPTL + +R+ IQAFN+GL++ILIT DG + E
Sbjct: 477 RFGISCGVLSPTLSLESRQSLIQAFNKGLLEILITTDGAWDE 518
>gi|237831677|ref|XP_002365136.1| ATP-dependent nucleolar RNA helicase, putative [Toxoplasma gondii
ME49]
gi|211962800|gb|EEA97995.1| ATP-dependent nucleolar RNA helicase, putative [Toxoplasma gondii
ME49]
gi|221506698|gb|EEE32315.1| ATP-dependent nucleolar RNA helicase, putative [Toxoplasma gondii
VEG]
Length = 888
Score = 183 bits (464), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 116/160 (72%), Gaps = 5/160 (3%)
Query: 1 DLLFAFGFENDTKRLLQLLPSTAARHYQTILVSATQNHELSQLQHLMLHKPLIIKIVEEE 60
DLL +FGFEN+ RLL LP+TA RHYQ +L+SAT N E+++LQ ++LHK ++++I
Sbjct: 358 DLLLSFGFENEMNRLLACLPATAERHYQALLLSATLNEEVAKLQQMLLHKAVMVEI---- 413
Query: 61 GSHADGSAASCISEFYFQVPTEAEKWLVAYAFLRLGLVPLKCLVFCKDVSSVYALRLFLD 120
A+S +SEFY +P +KW+V YAFL+L LVP KCL+F VSS Y +R+FL+
Sbjct: 414 -DDTLQQASSQLSEFYLSLPKAGDKWVVLYAFLKLNLVPRKCLIFTSGVSSAYGVRIFLE 472
Query: 121 RFGIASGVLSPTLPVAAREQQIQAFNQGLIDILITNDGQF 160
RFGI GVLSPTL + +R+ IQAFN+GL++ILIT DG +
Sbjct: 473 RFGIGCGVLSPTLSIESRQSLIQAFNKGLLEILITTDGAW 512
>gi|221487015|gb|EEE25261.1| ATP-dependent nucleolar RNA helicase, putative [Toxoplasma gondii
GT1]
Length = 888
Score = 183 bits (464), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 116/160 (72%), Gaps = 5/160 (3%)
Query: 1 DLLFAFGFENDTKRLLQLLPSTAARHYQTILVSATQNHELSQLQHLMLHKPLIIKIVEEE 60
DLL +FGFEN+ RLL LP+TA RHYQ +L+SAT N E+++LQ ++LHK ++++I
Sbjct: 358 DLLLSFGFENEMNRLLACLPATAERHYQALLLSATLNEEVAKLQQMLLHKAVMVEI---- 413
Query: 61 GSHADGSAASCISEFYFQVPTEAEKWLVAYAFLRLGLVPLKCLVFCKDVSSVYALRLFLD 120
A+S +SEFY +P +KW+V YAFL+L LVP KCL+F VSS Y +R+FL+
Sbjct: 414 -DDTLQQASSQLSEFYLSLPKAGDKWVVLYAFLKLNLVPRKCLIFTSGVSSAYGVRIFLE 472
Query: 121 RFGIASGVLSPTLPVAAREQQIQAFNQGLIDILITNDGQF 160
RFGI GVLSPTL + +R+ IQAFN+GL++ILIT DG +
Sbjct: 473 RFGIGCGVLSPTLSIESRQSLIQAFNKGLLEILITTDGAW 512
>gi|66359422|ref|XP_626889.1| Dbp9p, eIF4A-1-family RNA SFII helicase, DEXDc+HELICc
[Cryptosporidium parvum Iowa II]
gi|46228356|gb|EAK89255.1| Dbp9p, eIF4A-1-family RNA SFII helicase, DEXDc+HELICc
[Cryptosporidium parvum Iowa II]
Length = 664
Score = 154 bits (390), Expect = 6e-36, Method: Composition-based stats.
Identities = 68/165 (41%), Positives = 109/165 (66%), Gaps = 8/165 (4%)
Query: 1 DLLFAFGFENDTKRLLQLLPSTAARHYQTILVSATQNHELSQLQHLMLHKPLIIKI---- 56
DLLFAFG++ D ++L LLP++ R YQ IL+SAT N E+ L+ ++LH+P+ + I
Sbjct: 181 DLLFAFGYDKDMSKVLDLLPNSQDRKYQCILLSATLNKEVDSLKKMVLHRPIFVDIKPEI 240
Query: 57 ----VEEEGSHADGSAASCISEFYFQVPTEAEKWLVAYAFLRLGLVPLKCLVFCKDVSSV 112
++EG+ + + +SE+Y + +KWL+ Y L++ ++P KCL+F +V +
Sbjct: 241 KEDYFDQEGNDSKCQTSGLLSEYYTICDSMVDKWLMLYILLKMNVIPRKCLIFVSEVDTA 300
Query: 113 YALRLFLDRFGIASGVLSPTLPVAAREQQIQAFNQGLIDILITND 157
Y+++LFL+RFG++ GVL+P +P A R IQ FNQG DIL+T+D
Sbjct: 301 YSIKLFLERFGMSCGVLTPIIPAATRRMLIQCFNQGSYDILVTSD 345
>gi|67623801|ref|XP_668183.1| ENSANGP00000021948 [Cryptosporidium hominis TU502]
gi|54659367|gb|EAL37947.1| ENSANGP00000021948 [Cryptosporidium hominis]
Length = 661
Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats.
Identities = 69/165 (41%), Positives = 107/165 (64%), Gaps = 8/165 (4%)
Query: 1 DLLFAFGFENDTKRLLQLLPSTAARHYQTILVSATQNHELSQLQHLMLHKPLIIKIVEE- 59
DLLFAFG++ D ++L LLP++ R YQ IL+SAT N E+ L+ ++LH+P+ + I E
Sbjct: 178 DLLFAFGYDKDMSKVLDLLPNSQDRKYQCILLSATLNKEVDSLKKMVLHRPIFVDIKPEI 237
Query: 60 -------EGSHADGSAASCISEFYFQVPTEAEKWLVAYAFLRLGLVPLKCLVFCKDVSSV 112
EG+ + + +SE+Y +KWL+ Y L++ ++P KCL+F +V +
Sbjct: 238 KEDDFNQEGNDSKYQTSGLLSEYYTICDNMVDKWLMLYILLKMNVIPRKCLIFVSEVDTA 297
Query: 113 YALRLFLDRFGIASGVLSPTLPVAAREQQIQAFNQGLIDILITND 157
Y+++LFL+RFG++ GVL+P +P A R IQ FNQG DIL+T+D
Sbjct: 298 YSIKLFLERFGMSCGVLTPIIPAATRRMLIQCFNQGSYDILVTSD 342
>gi|209882032|ref|XP_002142453.1| DEAD/DEAH box helicase family protein [Cryptosporidium muris RN66]
gi|209558059|gb|EEA08104.1| DEAD/DEAH box helicase family protein [Cryptosporidium muris RN66]
Length = 615
Score = 138 bits (348), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 79/216 (36%), Positives = 116/216 (53%), Gaps = 25/216 (11%)
Query: 1 DLLFAFGFENDTKRLLQLLPSTAARHYQTILVSATQNHELSQLQHLMLHKPLIIKIVEE- 59
DLLFAFG+E + +L+LLP++A + YQ I SAT + L L +LHKP+ + + +
Sbjct: 160 DLLFAFGYEKYMEIILELLPNSAGKKYQCIFCSATLSKNLKLLNSKLLHKPICVNEISQA 219
Query: 60 -EGSHADGSAASCI-SEFYFQVPTEAEKWLVAYAFLRLGLVPLKCLVFCKDVSSVYALRL 117
E S D S+ I E+Y EKWL+ Y ++ ++P+KCL+F + Y++RL
Sbjct: 220 NEKSVLDKSSIEGILKEYYVNCSNITEKWLMLYVLFKMQVIPIKCLIFASSIDMAYSIRL 279
Query: 118 FLDRFGIASGVLSPTLPVAAREQQIQAFNQGLIDILITNDGQFMEGKNPPADXXXXXXXX 177
FLD+F I++G++SP LP + R+ IQ FNQG IDILIT D + D
Sbjct: 280 FLDKFDISAGIMSPILPFSTRQLIIQYFNQGTIDILITADITNELDEISTKDIL------ 333
Query: 178 XXXXXXXXXKRRREDQTKAKDSEFAGHRGLDMQGVA 213
+ AK E +RG+D QGV+
Sbjct: 334 ----------------SSAKSKEAVAYRGIDYQGVS 353
>gi|154281927|ref|XP_001541776.1| hypothetical protein HCAG_03874 [Ajellomyces capsulatus NAm1]
gi|160380634|sp|A6R2L6.1|DBP9_AJECN RecName: Full=ATP-dependent RNA helicase DBP9
gi|150411955|gb|EDN07343.1| hypothetical protein HCAG_03874 [Ajellomyces capsulatus NAm1]
Length = 625
Score = 114 bits (285), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 112/232 (48%), Gaps = 29/232 (12%)
Query: 1 DLLFAFGFENDTKRLLQLLPSTAARHYQTILVSATQNHELSQLQHLMLHKPLIIKIVEEE 60
DL+ ++G+E D + L + +P R QT L+SAT E+ L+ L P+++K+ E+E
Sbjct: 184 DLVLSYGYEEDMQSLAKAVP----RGVQTFLMSATFTSEVDTLKGLFCRNPVVLKLEEKE 239
Query: 61 GSHADGSAASCISEFYFQVPTEAEKWLVAYAFLRLGLVPLKCLVFCKDVSSVYALRLFLD 120
A IS+F + E EK+L+ Y +L LV KC++F DV Y L+LFL+
Sbjct: 240 DEGAG------ISQFVVRRCAEDEKFLLTYVIFKLQLVKGKCIIFVGDVDRCYRLKLFLE 293
Query: 121 RFGIASGVLSPTLPVAAREQQIQAFNQGLIDILITNDGQFMEG---KNPPADXXXXXXXX 177
+FGI S VL+ LPV +R +Q FN+G+ DI+I D Q + G KN
Sbjct: 294 QFGIRSCVLNSELPVNSRIHVVQEFNKGVYDIIIAVDDQEVLGELRKNSKKQPRKSDQCS 353
Query: 178 XXXXXXXXXKRRREDQ----------------TKAKDSEFAGHRGLDMQGVA 213
R DQ AK+ ++ RG+D Q VA
Sbjct: 354 RDSEYDGAQTSRNNDQYSSEDDAETQPSKRPKKSAKEKDYGISRGIDFQNVA 405
>gi|270002128|gb|EEZ98575.1| hypothetical protein TcasGA2_TC001089 [Tribolium castaneum]
Length = 550
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 100/169 (59%), Gaps = 10/169 (5%)
Query: 1 DLLFAFGFENDTKRLLQLLPSTAARHYQTILVSATQNHELSQLQHLMLHKPLIIKIVEEE 60
DL+F+FG+E++ K LL+ LPS YQ IL SAT + ++ L+ L+LH P+I+K+ E E
Sbjct: 170 DLVFSFGYESEVKELLERLPSI----YQAILASATLSEDVKNLKSLVLHNPVILKLEEPE 225
Query: 61 GSHADGSAASCISEFYFQVPTEAEKWLVAYAFLRLGLVPLKCLVFCKDVSSVYALRLFLD 120
+ AS +S ++ + E +K + YA L+L L+ K ++F V Y ++L+L+
Sbjct: 226 IA-----PASQLSHYHL-MAEEMDKATILYALLKLHLIRGKTIIFVNTVDKCYKIKLYLE 279
Query: 121 RFGIASGVLSPTLPVAAREQQIQAFNQGLIDILITNDGQFMEGKNPPAD 169
+FGI + VL+ LP R + FNQG+ D ++ +D + +E P D
Sbjct: 280 QFGIPTCVLNSELPAKIRCHSVNQFNQGIYDTIVASDEKALEQPGNPND 328
>gi|195132612|ref|XP_002010737.1| GI21708 [Drosophila mojavensis]
gi|193907525|gb|EDW06392.1| GI21708 [Drosophila mojavensis]
Length = 566
Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 111/212 (52%), Gaps = 30/212 (14%)
Query: 1 DLLFAFGFENDTKRLLQLLPSTAARHYQTILVSATQNHELSQLQHLMLHKPLIIKIVEEE 60
DL+FAFG+E D K+L++LLP YQ +LVSAT + ++++++ L LH + +K+ E +
Sbjct: 166 DLIFAFGYEKDFKKLIKLLPPI----YQAVLVSATISDDVARMKGLCLHNAVTLKLEEPD 221
Query: 61 GSHADGSAASCISEFYFQVPTEAEKWLVAYAFLRLGLVPLKCLVFCKDVSSVYALRLFLD 120
D + I + E EK + YA L+L L+ K ++F +V Y +RLFL+
Sbjct: 222 LVSLDQLSHHRI------LAEENEKPAILYALLKLMLIQGKSIIFVNNVDRCYKVRLFLE 275
Query: 121 RFGIASGVLSPTLPVAAREQQIQAFNQGLIDILITNDGQFMEGKNPPADXXXXXXXXXXX 180
+FGI S VL+ LP R I FN+G+ DI+I +D +E PA
Sbjct: 276 QFGIRSCVLNSELPANIRIHTINQFNRGVYDIIIASDEHLLEK---PAG----------- 321
Query: 181 XXXXXXKRRREDQTKAKDSEFAGHRGLDMQGV 212
K + + + D E + RG+D QGV
Sbjct: 322 ------KTKNKGGQQKNDHESSASRGIDFQGV 347
>gi|91077434|ref|XP_966623.1| PREDICTED: similar to ATP-dependent RNA helicase DBP9 [Tribolium
castaneum]
Length = 647
Score = 112 bits (279), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 100/169 (59%), Gaps = 10/169 (5%)
Query: 1 DLLFAFGFENDTKRLLQLLPSTAARHYQTILVSATQNHELSQLQHLMLHKPLIIKIVEEE 60
DL+F+FG+E++ K LL+ LPS YQ IL SAT + ++ L+ L+LH P+I+K+ E E
Sbjct: 170 DLVFSFGYESEVKELLERLPSI----YQAILASATLSEDVKNLKSLVLHNPVILKLEEPE 225
Query: 61 GSHADGSAASCISEFYFQVPTEAEKWLVAYAFLRLGLVPLKCLVFCKDVSSVYALRLFLD 120
+ AS +S ++ + E +K + YA L+L L+ K ++F V Y ++L+L+
Sbjct: 226 IA-----PASQLSHYHL-MAEEMDKATILYALLKLHLIRGKTIIFVNTVDKCYKIKLYLE 279
Query: 121 RFGIASGVLSPTLPVAAREQQIQAFNQGLIDILITNDGQFMEGKNPPAD 169
+FGI + VL+ LP R + FNQG+ D ++ +D + +E P D
Sbjct: 280 QFGIPTCVLNSELPAKIRCHSVNQFNQGIYDTIVASDEKALEQPGNPND 328
>gi|295674119|ref|XP_002797605.1| ATP-dependent RNA helicase DBP9 [Paracoccidioides brasiliensis
Pb01]
gi|226280255|gb|EEH35821.1| ATP-dependent RNA helicase DBP9 [Paracoccidioides brasiliensis
Pb01]
Length = 607
Score = 111 bits (278), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 98/166 (59%), Gaps = 11/166 (6%)
Query: 1 DLLFAFGFENDTKRLLQLLPSTAARHYQTILVSATQNHELSQLQHLMLHKPLIIKIVEEE 60
DL+ ++G+E D + L + +P R QT L+SAT + E+ L+ L P+I+K+ E++
Sbjct: 161 DLVLSYGYEQDMQNLAKAVP----RGVQTFLMSATFSSEVDTLKGLFCRNPVILKLEEKD 216
Query: 61 GSHADGSAASCISEFYFQVPTEAEKWLVAYAFLRLGLVPLKCLVFCKDVSSVYALRLFLD 120
A IS+F + E EK+L+ Y +L LV KC++F DV Y L+LFL+
Sbjct: 217 DEGAG------ISQFVVRC-AEDEKFLLTYVIFKLQLVKGKCIIFVGDVDRCYRLKLFLE 269
Query: 121 RFGIASGVLSPTLPVAAREQQIQAFNQGLIDILITNDGQFMEGKNP 166
+FGI S VL+ LPV +R +Q FN+G+ DI+I D Q + G+ P
Sbjct: 270 QFGIRSCVLNSELPVNSRIHVVQEFNKGVYDIIIAADDQEVLGELP 315
>gi|225563337|gb|EEH11616.1| ATP-dependent RNA helicase DBP9 [Ajellomyces capsulatus G186AR]
Length = 624
Score = 111 bits (278), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 75/232 (32%), Positives = 112/232 (48%), Gaps = 30/232 (12%)
Query: 1 DLLFAFGFENDTKRLLQLLPSTAARHYQTILVSATQNHELSQLQHLMLHKPLIIKIVEEE 60
DL+ ++G+E D + L + +P R QT L+SAT E+ L+ L P+++K+ E+E
Sbjct: 184 DLVLSYGYEEDMQNLAKAVP----RGVQTFLMSATFTSEVDTLKGLFCRNPVVLKLEEKE 239
Query: 61 GSHADGSAASCISEFYFQVPTEAEKWLVAYAFLRLGLVPLKCLVFCKDVSSVYALRLFLD 120
A IS+F + E EK+L+ Y +L LV KC++F DV Y L+LFL+
Sbjct: 240 DEGA------GISQFVVRC-AEDEKFLLTYVIFKLQLVKGKCIIFVGDVDRCYRLKLFLE 292
Query: 121 RFGIASGVLSPTLPVAAREQQIQAFNQGLIDILITNDGQFMEG---KNPPADXXXXXXXX 177
+FGI S VL+ LPV +R +Q FN+G+ DI+I D Q + G KN
Sbjct: 293 QFGIRSCVLNSELPVNSRIHVVQEFNKGVYDIIIAADDQEVLGELRKNSKKQPRKSDQSS 352
Query: 178 XXXXXXXXXKRRREDQ----------------TKAKDSEFAGHRGLDMQGVA 213
+ DQ AK+ ++ RG+D Q VA
Sbjct: 353 RDSEYDGAQASKNNDQYSSEDDAETQPSKRPKKSAKEKDYGISRGIDFQNVA 404
>gi|320035635|gb|EFW17576.1| ATP-dependent RNA helicase [Coccidioides posadasii str. Silveira]
Length = 467
Score = 111 bits (277), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 97/166 (58%), Gaps = 11/166 (6%)
Query: 1 DLLFAFGFENDTKRLLQLLPSTAARHYQTILVSATQNHELSQLQHLMLHKPLIIKIVEEE 60
DL+ ++G+E D + L + +P R QT+L+SAT E+ L+ L P+I+K+ E E
Sbjct: 183 DLVLSYGYEQDMQNLAKAIP----RGVQTLLMSATLTSEVDALKGLFCRSPVILKLEEAE 238
Query: 61 GSHADGSAASCISEFYFQVPTEAEKWLVAYAFLRLGLVPLKCLVFCKDVSSVYALRLFLD 120
A I++F + E EK+L+ Y +L LV KC++F D+ Y L+LFL+
Sbjct: 239 DEGAG------IAQFAVKC-AEDEKFLLTYVIFKLQLVKGKCIIFVGDIDRSYRLKLFLE 291
Query: 121 RFGIASGVLSPTLPVAAREQQIQAFNQGLIDILITNDGQFMEGKNP 166
+FGI S VL+ LPV +R +Q FN+G+ DI+I D Q + G+ P
Sbjct: 292 QFGIKSCVLNSELPVNSRIHVVQEFNKGVYDIIIAADDQEVIGEIP 337
>gi|258565271|ref|XP_002583380.1| ATP-dependent helicase [Uncinocarpus reesii 1704]
gi|237907081|gb|EEP81482.1| ATP-dependent helicase [Uncinocarpus reesii 1704]
Length = 607
Score = 111 bits (277), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 96/166 (57%), Gaps = 11/166 (6%)
Query: 1 DLLFAFGFENDTKRLLQLLPSTAARHYQTILVSATQNHELSQLQHLMLHKPLIIKIVEEE 60
DL+ ++G+E D + L + +P R QT+L+SAT E+ L+ L P+ +K+ E E
Sbjct: 179 DLVLSYGYEQDMQHLAKSIP----RGVQTLLMSATLTSEVDTLKGLFCRSPVTLKLEEAE 234
Query: 61 GSHADGSAASCISEFYFQVPTEAEKWLVAYAFLRLGLVPLKCLVFCKDVSSVYALRLFLD 120
A IS+F + E EK+L+ Y +L LV KC++F DV Y L+LFL+
Sbjct: 235 DEGAG------ISQFAVKC-AEDEKFLLTYVIFKLQLVKGKCIIFVGDVDRSYRLKLFLE 287
Query: 121 RFGIASGVLSPTLPVAAREQQIQAFNQGLIDILITNDGQFMEGKNP 166
+FGI S VL+ LPV +R +Q FN+G+ DI+I D Q + G+ P
Sbjct: 288 QFGIKSCVLNSELPVNSRIHVVQEFNKGVYDIIIAADDQEVVGEVP 333
>gi|225684674|gb|EEH22958.1| ATP-dependent RNA helicase dbp9 [Paracoccidioides brasiliensis
Pb03]
Length = 885
Score = 111 bits (277), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 98/166 (59%), Gaps = 11/166 (6%)
Query: 1 DLLFAFGFENDTKRLLQLLPSTAARHYQTILVSATQNHELSQLQHLMLHKPLIIKIVEEE 60
DL+ ++G+E D + L + +P R QT L+SAT + E+ L+ L P+I+K+ E++
Sbjct: 439 DLVLSYGYEQDMQNLAKAVP----RGVQTFLMSATFSSEVDTLKGLFCRNPVILKLEEKD 494
Query: 61 GSHADGSAASCISEFYFQVPTEAEKWLVAYAFLRLGLVPLKCLVFCKDVSSVYALRLFLD 120
A IS+F + E EK+L+ Y +L LV KC++F DV Y L+LFL+
Sbjct: 495 DEGAG------ISQFVVRC-AEDEKFLLTYVIFKLQLVKGKCIIFVGDVDRCYRLKLFLE 547
Query: 121 RFGIASGVLSPTLPVAAREQQIQAFNQGLIDILITNDGQFMEGKNP 166
+FGI S VL+ LPV +R +Q FN+G+ DI+I D Q + G+ P
Sbjct: 548 QFGIRSCVLNSELPVNSRIHVVQEFNKGVYDIIIAADDQEVLGELP 593
>gi|303315147|ref|XP_003067581.1| ATP-dependent RNA helicase DBP9, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|240107251|gb|EER25436.1| ATP-dependent RNA helicase DBP9, putative [Coccidioides posadasii
C735 delta SOWgp]
Length = 612
Score = 111 bits (277), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 97/166 (58%), Gaps = 11/166 (6%)
Query: 1 DLLFAFGFENDTKRLLQLLPSTAARHYQTILVSATQNHELSQLQHLMLHKPLIIKIVEEE 60
DL+ ++G+E D + L + +P R QT+L+SAT E+ L+ L P+I+K+ E E
Sbjct: 183 DLVLSYGYEQDMQNLAKAIP----RGVQTLLMSATLTSEVDALKGLFCRSPVILKLEEAE 238
Query: 61 GSHADGSAASCISEFYFQVPTEAEKWLVAYAFLRLGLVPLKCLVFCKDVSSVYALRLFLD 120
A I++F + E EK+L+ Y +L LV KC++F D+ Y L+LFL+
Sbjct: 239 DEGAG------IAQFAVKC-AEDEKFLLTYVIFKLQLVKGKCIIFVGDIDRSYRLKLFLE 291
Query: 121 RFGIASGVLSPTLPVAAREQQIQAFNQGLIDILITNDGQFMEGKNP 166
+FGI S VL+ LPV +R +Q FN+G+ DI+I D Q + G+ P
Sbjct: 292 QFGIKSCVLNSELPVNSRIHVVQEFNKGVYDIIIAADDQEVIGEIP 337
>gi|119190623|ref|XP_001245918.1| hypothetical protein CIMG_05359 [Coccidioides immitis RS]
gi|118578052|sp|Q1DWF4.1|DBP9_COCIM RecName: Full=ATP-dependent RNA helicase DBP9
Length = 607
Score = 110 bits (276), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 97/166 (58%), Gaps = 11/166 (6%)
Query: 1 DLLFAFGFENDTKRLLQLLPSTAARHYQTILVSATQNHELSQLQHLMLHKPLIIKIVEEE 60
DL+ ++G+E D + L + +P R QT+L+SAT E+ L+ L P+I+K+ E E
Sbjct: 178 DLVLSYGYEQDMQNLAKAIP----RGVQTLLMSATLTSEVDALKGLFCRSPVILKLEEAE 233
Query: 61 GSHADGSAASCISEFYFQVPTEAEKWLVAYAFLRLGLVPLKCLVFCKDVSSVYALRLFLD 120
A I++F + E EK+L+ Y +L LV KC++F D+ Y L+LFL+
Sbjct: 234 DEGAG------IAQFAVKC-AEDEKFLLTYVIFKLQLVKGKCIIFVGDIDRSYRLKLFLE 286
Query: 121 RFGIASGVLSPTLPVAAREQQIQAFNQGLIDILITNDGQFMEGKNP 166
+FGI S VL+ LPV +R +Q FN+G+ DI+I D Q + G+ P
Sbjct: 287 QFGIKSCVLNSELPVNSRIHVVQEFNKGVYDIIIAADDQEVIGEIP 332
>gi|321462909|gb|EFX73929.1| hypothetical protein DAPPUDRAFT_109408 [Daphnia pulex]
Length = 541
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/165 (37%), Positives = 98/165 (59%), Gaps = 10/165 (6%)
Query: 1 DLLFAFGFENDTKRLLQLLPSTAARHYQTILVSATQNHELSQLQHLMLHKPLIIKIVEEE 60
DL+F+FGFE D K +L LP+ YQ +L SAT ++ L+ L+LH+P+ +K+ E E
Sbjct: 156 DLVFSFGFEEDLKSVLGYLPT----DYQCVLTSATLGDDIQSLKQLVLHQPVTLKLEEPE 211
Query: 61 GSHADGSAASCISEFYFQVPTEAEKWLVAYAFLRLGLVPLKCLVFCKDVSSVYALRLFLD 120
AS ++++ E++K ++ YA +LGLV K ++F ++V Y L+L+L
Sbjct: 212 LP-----PASQLTQYQIYA-EESDKAVLIYALFKLGLVRGKTIIFVRNVDRCYKLKLYLQ 265
Query: 121 RFGIASGVLSPTLPVAAREQQIQAFNQGLIDILITNDGQFMEGKN 165
+FGI S L+ LPV +R +Q FN G+ DI+I +D +E N
Sbjct: 266 QFGIPSCALNGELPVNSRCHIVQQFNAGIYDIIIASDESTLEDPN 310
>gi|240275931|gb|EER39444.1| ATP-dependent RNA helicase DBP9 [Ajellomyces capsulatus H143]
Length = 621
Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 109/203 (53%), Gaps = 27/203 (13%)
Query: 1 DLLFAFGFENDTKRLLQLLPSTAARHYQTILVSATQNHELSQLQHLMLHKPLIIKIVEEE 60
DL+ ++G+E D + L + +P R QT L+SAT E+ L+ L P+++K+ E+E
Sbjct: 181 DLVLSYGYEEDMQSLAKAVP----RGVQTFLMSATFTSEVDTLKGLFCRNPVVLKLEEKE 236
Query: 61 GSHADGSAASCISEFYFQVPTEAEKWLVAYAFLRLGLVPLKCLVFCKDVSSVYALRLFLD 120
A IS+F + E EK+L+ Y +L LV KC++F DV Y L+LFL+
Sbjct: 237 DEGA------GISQFVVRC-AEDEKFLLTYVIFKLQLVKGKCIIFVGDVDRCYRLKLFLE 289
Query: 121 RFGIASGVLSPTLPVAAREQQIQAFNQGLIDILITNDGQFMEGKNPPADXXXXXXXXXXX 180
+FGI S VL+ LPV +R +Q FN+G+ DI+I D Q + G+
Sbjct: 290 QFGIRSCVLNSELPVNSRIHVVQEFNKGVYDIIIAADDQEVLGE---------------L 334
Query: 181 XXXXXXKRRREDQTKAKDSEFAG 203
+ R+ DQ+ ++DSE+ G
Sbjct: 335 RKNSKKQPRKSDQS-SRDSEYDG 356
>gi|325093293|gb|EGC46603.1| ATP-dependent RNA helicase DBP9 [Ajellomyces capsulatus H88]
Length = 621
Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 109/203 (53%), Gaps = 27/203 (13%)
Query: 1 DLLFAFGFENDTKRLLQLLPSTAARHYQTILVSATQNHELSQLQHLMLHKPLIIKIVEEE 60
DL+ ++G+E D + L + +P R QT L+SAT E+ L+ L P+++K+ E+E
Sbjct: 181 DLVLSYGYEEDMQSLAKAVP----RGVQTFLMSATFTSEVDTLKGLFCRNPVVLKLEEKE 236
Query: 61 GSHADGSAASCISEFYFQVPTEAEKWLVAYAFLRLGLVPLKCLVFCKDVSSVYALRLFLD 120
A IS+F + E EK+L+ Y +L LV KC++F DV Y L+LFL+
Sbjct: 237 DEGA------GISQFVVRC-AEDEKFLLTYVIFKLQLVKGKCIIFVGDVDRCYRLKLFLE 289
Query: 121 RFGIASGVLSPTLPVAAREQQIQAFNQGLIDILITNDGQFMEGKNPPADXXXXXXXXXXX 180
+FGI S VL+ LPV +R +Q FN+G+ DI+I D Q + G+
Sbjct: 290 QFGIRSCVLNSELPVNSRIHVVQEFNKGVYDIIIAADDQEVLGE---------------L 334
Query: 181 XXXXXXKRRREDQTKAKDSEFAG 203
+ R+ DQ+ ++DSE+ G
Sbjct: 335 RKNSKKQPRKSDQS-SRDSEYDG 356
>gi|195173765|ref|XP_002027657.1| GL15985 [Drosophila persimilis]
gi|198470361|ref|XP_001355297.2| GA14086 [Drosophila pseudoobscura pseudoobscura]
gi|194114592|gb|EDW36635.1| GL15985 [Drosophila persimilis]
gi|198145414|gb|EAL32354.2| GA14086 [Drosophila pseudoobscura pseudoobscura]
Length = 558
Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/162 (37%), Positives = 96/162 (59%), Gaps = 10/162 (6%)
Query: 1 DLLFAFGFENDTKRLLQLLPSTAARHYQTILVSATQNHELSQLQHLMLHKPLIIKIVEEE 60
DL+FAFG+E D K LL+ LPS YQ++LVSAT + ++ +++ L LH P+ +K+ E +
Sbjct: 169 DLIFAFGYEMDFKALLKHLPSI----YQSVLVSATLSDDVVRMKGLCLHNPVTLKLEEPD 224
Query: 61 GSHADGSAASCISEFYFQVPTEAEKWLVAYAFLRLGLVPLKCLVFCKDVSSVYALRLFLD 120
D I + E +K ++ YA L+L L+ K ++F + Y +RLFL+
Sbjct: 225 VVSQDQLTHQRI------LAEENDKPVILYALLKLQLIRGKTIIFVNTIDRSYKIRLFLE 278
Query: 121 RFGIASGVLSPTLPVAAREQQIQAFNQGLIDILITNDGQFME 162
+FGI + VL+P LP + R I FN+G DI+I +D ++E
Sbjct: 279 QFGIRACVLNPQLPASIRINMISQFNKGTYDIIIASDQHYLE 320
>gi|315051032|ref|XP_003174890.1| ATP-dependent RNA helicase DBP9 [Arthroderma gypseum CBS 118893]
gi|311340205|gb|EFQ99407.1| ATP-dependent RNA helicase DBP9 [Arthroderma gypseum CBS 118893]
Length = 616
Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 93/164 (56%), Gaps = 11/164 (6%)
Query: 1 DLLFAFGFENDTKRLLQLLPSTAARHYQTILVSATQNHELSQLQHLMLHKPLIIKIVEEE 60
DL+ ++G+E D + L + +P R QT L+SAT E+ L+ L P I+K+ E E
Sbjct: 184 DLVLSYGYEQDMQSLAKAIP----RGVQTFLMSATLTSEVDTLKGLFCRSPAILKLEEAE 239
Query: 61 GSHADGSAASCISEFYFQVPTEAEKWLVAYAFLRLGLVPLKCLVFCKDVSSVYALRLFLD 120
A IS+F + E EK+L+ Y +L LV KC++F DV Y L+LFL+
Sbjct: 240 DEGAG------ISQFAVKC-AEDEKFLLTYVIFKLQLVKGKCIIFVGDVDRCYRLKLFLE 292
Query: 121 RFGIASGVLSPTLPVAAREQQIQAFNQGLIDILITNDGQFMEGK 164
+FGI S +L+ LP +R +Q FN+G+ DI+I D Q + GK
Sbjct: 293 QFGIKSCILNSELPANSRIHAVQEFNKGVYDIIIAADDQEVIGK 336
>gi|51467996|ref|NP_001003876.1| probable ATP-dependent RNA helicase DDX56 [Danio rerio]
gi|49619091|gb|AAT68130.1| DEAD/H box 56 RNA helicase/noh61 [Danio rerio]
Length = 557
Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/163 (41%), Positives = 96/163 (58%), Gaps = 10/163 (6%)
Query: 1 DLLFAFGFENDTKRLLQLLPSTAARHYQTILVSATQNHELSQLQHLMLHKPLIIKIVEEE 60
DLLF+FGFE D K LL LP YQ L+SAT N ++ L+ L+LH P+ +K+ +
Sbjct: 166 DLLFSFGFEADLKNLLCHLPKI----YQAFLMSATLNDDVQALKELVLHNPVTLKL---Q 218
Query: 61 GSHADGSAASCISEFYFQVPTEAEKWLVAYAFLRLGLVPLKCLVFCKDVSSVYALRLFLD 120
GS S S + +F + E +K+L+ Y L+LGL+ K L+F DV Y L+LFL+
Sbjct: 219 GSQLPDS--SQLQQFSIKC-EEEDKFLLIYTMLKLGLIQGKTLLFVSDVDRSYRLKLFLE 275
Query: 121 RFGIASGVLSPTLPVAAREQQIQAFNQGLIDILITNDGQFMEG 163
+F I + VL+ LPV +R I FNQG + +I +D Q +E
Sbjct: 276 QFSIPACVLNSELPVHSRCHIISQFNQGFYNYIIASDEQGLES 318
>gi|95132450|gb|AAI16543.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 56 [Danio rerio]
gi|182891866|gb|AAI65407.1| Ddx56 protein [Danio rerio]
Length = 557
Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/163 (41%), Positives = 96/163 (58%), Gaps = 10/163 (6%)
Query: 1 DLLFAFGFENDTKRLLQLLPSTAARHYQTILVSATQNHELSQLQHLMLHKPLIIKIVEEE 60
DLLF+FGFE D K LL LP YQ L+SAT N ++ L+ L+LH P+ +K+ +
Sbjct: 166 DLLFSFGFEADLKNLLCHLPKI----YQAFLMSATLNDDVQALKELVLHNPVTLKL---Q 218
Query: 61 GSHADGSAASCISEFYFQVPTEAEKWLVAYAFLRLGLVPLKCLVFCKDVSSVYALRLFLD 120
GS S S + +F + E +K+L+ Y L+LGL+ K L+F DV Y L+LFL+
Sbjct: 219 GSQLPDS--SQLQQFSIKC-EEEDKFLLIYTMLKLGLIQGKTLLFVSDVDRSYRLKLFLE 275
Query: 121 RFGIASGVLSPTLPVAAREQQIQAFNQGLIDILITNDGQFMEG 163
+F I + VL+ LPV +R I FNQG + +I +D Q +E
Sbjct: 276 QFSIPACVLNSELPVHSRCHIISQFNQGFYNYIIASDEQGLES 318
>gi|239610502|gb|EEQ87489.1| ATP-dependent RNA helicase DBP9 [Ajellomyces dermatitidis ER-3]
Length = 628
Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 96/166 (57%), Gaps = 11/166 (6%)
Query: 1 DLLFAFGFENDTKRLLQLLPSTAARHYQTILVSATQNHELSQLQHLMLHKPLIIKIVEEE 60
DL+ ++G+E D + L + +P R Q L+SAT E+ L+ L P+++K+ E+E
Sbjct: 184 DLVLSYGYEEDMQSLAKAVP----RGVQAFLMSATFTSEVDALKGLFCRNPVVLKLEEKE 239
Query: 61 GSHADGSAASCISEFYFQVPTEAEKWLVAYAFLRLGLVPLKCLVFCKDVSSVYALRLFLD 120
A IS+F + E EK+L+ Y +L LV KC++F DV Y L+LFL+
Sbjct: 240 DEGA------GISQFVVRC-AEDEKFLLTYVIFKLQLVKGKCIIFVGDVDRCYRLKLFLE 292
Query: 121 RFGIASGVLSPTLPVAAREQQIQAFNQGLIDILITNDGQFMEGKNP 166
+FGI S VL+ LPV +R +Q FN+G+ DI+I D Q + G+ P
Sbjct: 293 QFGIRSCVLNSELPVNSRIHVVQEFNKGVYDIIIAADDQEVLGELP 338
>gi|326476368|gb|EGE00378.1| ATP-dependent RNA helicase DBP9 [Trichophyton tonsurans CBS 112818]
gi|326484727|gb|EGE08737.1| ATP-dependent RNA helicase DBP9 [Trichophyton equinum CBS 127.97]
Length = 618
Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 112/229 (48%), Gaps = 27/229 (11%)
Query: 1 DLLFAFGFENDTKRLLQLLPSTAARHYQTILVSATQNHELSQLQHLMLHKPLIIKIVEEE 60
DLL ++G+E D + L + +P R QT L+SAT E+ L+ L P I+K+ E E
Sbjct: 184 DLLLSYGYEQDMQNLAKAIP----RGVQTFLMSATLTSEVDTLKGLFCRSPAILKLEEAE 239
Query: 61 GSHADGSAASCISEFYFQVPTEAEKWLVAYAFLRLGLVPLKCLVFCKDVSSVYALRLFLD 120
A IS+F + E +K+L+ Y +L LV KC++F DV Y L+LFL+
Sbjct: 240 DEGAG------ISQFAVKC-AEDDKFLLTYVIFKLQLVKGKCIIFVGDVDRCYRLKLFLE 292
Query: 121 RFGIASGVLSPTLPVAAREQQIQAFNQGLIDILITNDGQFMEGK-----------NPPAD 169
+FGI S +L+ LP +R ++ FN+G+ DI+I D Q + GK P AD
Sbjct: 293 QFGIKSCILNSELPANSRIHAVEEFNKGVYDIIIAADDQEVIGKIESKKEPSESEVPIAD 352
Query: 170 XXXXXXXXXXXXXXXXXK-----RRREDQTKAKDSEFAGHRGLDMQGVA 213
K + ++ + K+ ++ RG+D Q VA
Sbjct: 353 GATEENKDLSEPEEVEEKAAPSNKNKKRKRSGKEKDYGISRGIDFQDVA 401
>gi|261195464|ref|XP_002624136.1| ATP-dependent RNA helicase DBP9 [Ajellomyces dermatitidis SLH14081]
gi|239588008|gb|EEQ70651.1| ATP-dependent RNA helicase DBP9 [Ajellomyces dermatitidis SLH14081]
Length = 628
Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 95/166 (57%), Gaps = 11/166 (6%)
Query: 1 DLLFAFGFENDTKRLLQLLPSTAARHYQTILVSATQNHELSQLQHLMLHKPLIIKIVEEE 60
DL+ ++G+E D + L +P R Q L+SAT E+ L+ L P+++K+ E+E
Sbjct: 184 DLVLSYGYEEDMQSLANAVP----RGVQAFLMSATFTSEVDALKGLFCRNPVVLKLEEKE 239
Query: 61 GSHADGSAASCISEFYFQVPTEAEKWLVAYAFLRLGLVPLKCLVFCKDVSSVYALRLFLD 120
A IS+F + E EK+L+ Y +L LV KC++F DV Y L+LFL+
Sbjct: 240 DEGA------GISQFVVRC-AEDEKFLLTYVIFKLQLVKGKCIIFVGDVDRCYRLKLFLE 292
Query: 121 RFGIASGVLSPTLPVAAREQQIQAFNQGLIDILITNDGQFMEGKNP 166
+FGI S VL+ LPV +R +Q FN+G+ DI+I D Q + G+ P
Sbjct: 293 QFGIRSCVLNSELPVNSRIHVVQEFNKGVYDIIIAADDQEVLGELP 338
>gi|242780444|ref|XP_002479596.1| ATP dependent RNA helicase (Dbp9), putative [Talaromyces stipitatus
ATCC 10500]
gi|218719743|gb|EED19162.1| ATP dependent RNA helicase (Dbp9), putative [Talaromyces stipitatus
ATCC 10500]
Length = 620
Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 92/163 (56%), Gaps = 11/163 (6%)
Query: 1 DLLFAFGFENDTKRLLQLLPSTAARHYQTILVSATQNHELSQLQHLMLHKPLIIKIVEEE 60
DL+ ++G+E+D L + +P R QT L+SAT E+ L+ L P+I+K+ E E
Sbjct: 184 DLVLSYGYEDDINALAKAVP----RGVQTFLMSATLTSEVDTLKGLFCRNPVILKLTEAE 239
Query: 61 GSHADGSAASCISEFYFQVPTEAEKWLVAYAFLRLGLVPLKCLVFCKDVSSVYALRLFLD 120
IS+F + E EK+L+ Y +L LV KC++F D+ Y L+LFL+
Sbjct: 240 ------DEGGGISQFAVRC-AEDEKFLLTYVIFKLQLVKGKCIIFVGDIDRCYRLKLFLE 292
Query: 121 RFGIASGVLSPTLPVAAREQQIQAFNQGLIDILITNDGQFMEG 163
+FGI S VL+ LP +R +Q FN+G+ DI+I D Q + G
Sbjct: 293 QFGIKSCVLNSELPANSRIHVVQEFNKGVYDIIIAADDQEVLG 335
>gi|212526270|ref|XP_002143292.1| ATP dependent RNA helicase (Dbp9), putative [Penicillium marneffei
ATCC 18224]
gi|210072690|gb|EEA26777.1| ATP dependent RNA helicase (Dbp9), putative [Penicillium marneffei
ATCC 18224]
Length = 621
Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 92/163 (56%), Gaps = 11/163 (6%)
Query: 1 DLLFAFGFENDTKRLLQLLPSTAARHYQTILVSATQNHELSQLQHLMLHKPLIIKIVEEE 60
DL+ ++G+E+D L + +P R QT L+SAT E+ L+ L P+I+K+ E E
Sbjct: 184 DLVLSYGYEDDINALAKAVP----RGVQTFLMSATLTSEVDTLKGLFCRNPVILKLTETE 239
Query: 61 GSHADGSAASCISEFYFQVPTEAEKWLVAYAFLRLGLVPLKCLVFCKDVSSVYALRLFLD 120
IS+F + E EK+L+ Y +L LV KC++F D+ Y L+LFL+
Sbjct: 240 ------DEGGGISQFAVRC-AEDEKFLLTYVIFKLQLVKGKCIIFVGDIDRCYRLKLFLE 292
Query: 121 RFGIASGVLSPTLPVAAREQQIQAFNQGLIDILITNDGQFMEG 163
+FGI S VL+ LP +R +Q FN+G+ DI+I D Q + G
Sbjct: 293 QFGIKSCVLNSELPANSRIHVVQEFNKGVYDIIIAADDQEVLG 335
>gi|156552886|ref|XP_001600943.1| PREDICTED: similar to DEAD box ATP-dependent RNA helicase [Nasonia
vitripennis]
Length = 555
Score = 108 bits (270), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/213 (34%), Positives = 112/213 (52%), Gaps = 31/213 (14%)
Query: 1 DLLFAFGFENDTKRLLQLLPSTAARHYQTILVSATQNHELSQLQHLMLHKPLIIKIVEEE 60
DL+F+FG+E + K LL LP+ YQ IL SAT + ++ L+ L+LH P I+K+ EE
Sbjct: 180 DLIFSFGYEEEIKTLLAYLPTV----YQAILASATLSEDVLSLKKLVLHNPAILKL--EE 233
Query: 61 GSHADGSAASCISEFYFQVPTEAEKWLVAYAFLRLGLVPLKCLVFCKDVSSVYALRLFLD 120
A S + Y E +K + YA L+L L+ KC++F V Y L+LFL+
Sbjct: 234 PPLAPPSQLA----HYTLAAEENDKAAILYALLKLHLIRGKCIIFVNTVDRCYKLKLFLE 289
Query: 121 RFGIASGVLSPTLPVAAREQQIQAFNQGLIDILITNDGQFMEGKNPPADXXXXXXXXXXX 180
+FGI + VL+ LP ++R + + FN G DI+I +D + +E +
Sbjct: 290 QFGIPTCVLNSELPASSRCRAVTQFNSGTYDIIIASDEKALEEPH--------------- 334
Query: 181 XXXXXXKRRREDQTKAKDSEFAGHRGLDMQGVA 213
K++R + K K+S A RG+D Q V+
Sbjct: 335 ----VMKQKRGKRRKDKESGVA--RGIDFQFVS 361
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
Posted date: Jul 22, 2011 4:42 PM
Number of letters in database: 5,058,227,080
Number of sequences in database: 14,777,732
Lambda K H
0.322 0.137 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 14777732
Number of Hits to DB: 1,906,643,498
Number of extensions: 69728719
Number of successful extensions: 158658
Number of sequences better than 10.0: 4762
Number of HSP's gapped: 159660
Number of HSP's successfully gapped: 4763
Length of query: 213
Length of database: 5,058,227,080
Length adjustment: 133
Effective length of query: 80
Effective length of database: 3,092,788,724
Effective search space: 247423097920
Effective search space used: 247423097920
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 78 (34.7 bits)