BLASTP 2.2.24 [Aug-08-2010]
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eten_2297_orf7
(227 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
14,777,732 sequences; 5,058,227,080 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|325116764|emb|CBZ52317.1| putative SNARE domain-containing pr... 144 9e-33
gi|221483880|gb|EEE22184.1| conserved hypothetical protein [Toxo... 114 2e-23
gi|221505165|gb|EEE30819.1| conserved hypothetical protein [Toxo... 114 2e-23
gi|237836781|ref|XP_002367688.1| SNARE domain-containing protein... 113 2e-23
gi|221059924|ref|XP_002260607.1| syntaxin 5 [Plasmodium knowlesi... 77 2e-12
gi|156101762|ref|XP_001616574.1| syntaxin 5 [Plasmodium vivax Sa... 77 2e-12
gi|68525554|ref|XP_723636.1| hypothetical protein [Plasmodium yo... 77 2e-12
gi|70953656|ref|XP_745915.1| hypothetical protein [Plasmodium ch... 76 3e-12
gi|124805687|ref|XP_001350510.1| Qa-SNARE protein, putative [Pla... 76 4e-12
gi|156083899|ref|XP_001609433.1| hypothetical protein [Babesia b... 52 8e-05
gi|85000701|ref|XP_955069.1| syntaxin [Theileria annulata strain... 49 4e-04
gi|224110232|ref|XP_002333124.1| cc-nbs resistance protein [Popu... 39 0.53
gi|154175433|ref|YP_001407766.1| KWG [Campylobacter curvus 525.9... 37 2.1
gi|224114798|ref|XP_002332285.1| cc-nbs resistance protein [Popu... 37 2.1
gi|224122712|ref|XP_002318907.1| cc-nbs-lrr resistance protein [... 37 3.0
gi|224114836|ref|XP_002332294.1| cc-nbs resistance protein [Popu... 36 4.4
gi|168211337|ref|ZP_02636962.1| KID repeat family protein [Clost... 35 5.7
gi|224122696|ref|XP_002318903.1| cc-nbs-lrr resistance protein [... 35 5.8
gi|298530751|ref|ZP_07018153.1| ribonuclease R [Desulfonatronosp... 35 7.1
gi|71027517|ref|XP_763402.1| hypothetical protein [Theileria par... 35 7.2
gi|224114840|ref|XP_002332295.1| cc-nbs resistance protein [Popu... 35 7.2
gi|153829065|ref|ZP_01981732.1| hypothetical protein A59_A0440 [... 35 7.5
>gi|325116764|emb|CBZ52317.1| putative SNARE domain-containing protein [Neospora caninum
Liverpool]
Length = 507
Score = 144 bits (363), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 69/113 (61%), Positives = 90/113 (79%), Gaps = 3/113 (2%)
Query: 49 SYDAIVRANIQTIRSNLQSIETNLRNLNRNFISRRIVESLHDKLKQTFDVILQTETAFKS 108
S D +RANIQTIRSNL +IE NL NLNR F+SRRIVESLHD+L++T+D++L TE FK+
Sbjct: 60 SLDRTIRANIQTIRSNLLAIEENLGNLNRRFVSRRIVESLHDRLRETYDIVLSTERLFKA 119
Query: 109 WLQEQQQTAEAEIDSIEKQRDKFLFEKLFAHFQAEIRRVQDLSDQVRLAAERT 161
W EQQ + +D++E+QR +FL+EKL AHFQ EIR+VQ +S++VR AAER
Sbjct: 120 WQAEQQGQS---LDALERQRRRFLYEKLSAHFQEEIRKVQAISERVREAAERV 169
>gi|221483880|gb|EEE22184.1| conserved hypothetical protein [Toxoplasma gondii GT1]
Length = 427
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/93 (58%), Positives = 72/93 (77%), Gaps = 3/93 (3%)
Query: 71 NLRNLNRNFISRRIVESLHDKLKQTFDVILQTETAFKSWLQEQQQTAEAEIDSIEKQRDK 130
+L NLNR F+SRRIVESLHD+L++T+D++L TE FK W EQQ + ID +E+QR +
Sbjct: 8 SLGNLNRRFVSRRIVESLHDRLRETYDIVLSTERLFKDWQAEQQGQS---IDVLERQRRR 64
Query: 131 FLFEKLFAHFQAEIRRVQDLSDQVRLAAERTNN 163
FL+EKL AHFQ EIR+VQ +S++VR AAER +
Sbjct: 65 FLYEKLSAHFQEEIRKVQAISERVREAAERVAD 97
>gi|221505165|gb|EEE30819.1| conserved hypothetical protein [Toxoplasma gondii VEG]
Length = 427
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/93 (58%), Positives = 72/93 (77%), Gaps = 3/93 (3%)
Query: 71 NLRNLNRNFISRRIVESLHDKLKQTFDVILQTETAFKSWLQEQQQTAEAEIDSIEKQRDK 130
+L NLNR F+SRRIVESLHD+L++T+D++L TE FK W EQQ + ID +E+QR +
Sbjct: 8 SLGNLNRRFVSRRIVESLHDRLRETYDIVLSTERLFKDWQAEQQGQS---IDVLERQRRR 64
Query: 131 FLFEKLFAHFQAEIRRVQDLSDQVRLAAERTNN 163
FL+EKL AHFQ EIR+VQ +S++VR AAER +
Sbjct: 65 FLYEKLSAHFQEEIRKVQAISERVREAAERVAD 97
>gi|237836781|ref|XP_002367688.1| SNARE domain-containing protein [Toxoplasma gondii ME49]
gi|211965352|gb|EEB00548.1| SNARE domain-containing protein [Toxoplasma gondii ME49]
Length = 427
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/93 (58%), Positives = 72/93 (77%), Gaps = 3/93 (3%)
Query: 71 NLRNLNRNFISRRIVESLHDKLKQTFDVILQTETAFKSWLQEQQQTAEAEIDSIEKQRDK 130
+L NLNR F+SRRIVESLHD+L++T+D++L TE FK W EQQ + ID +E+QR +
Sbjct: 8 SLGNLNRRFVSRRIVESLHDRLRETYDIVLSTERLFKDWQAEQQGQS---IDVLERQRRR 64
Query: 131 FLFEKLFAHFQAEIRRVQDLSDQVRLAAERTNN 163
FL+EKL AHFQ EIR+VQ +S++VR AAER +
Sbjct: 65 FLYEKLSAHFQEEIRKVQAISERVREAAERVAD 97
>gi|221059924|ref|XP_002260607.1| syntaxin 5 [Plasmodium knowlesi strain H]
gi|193810681|emb|CAQ42579.1| syntaxin 5, putative [Plasmodium knowlesi strain H]
Length = 307
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 68/105 (64%), Gaps = 6/105 (5%)
Query: 54 VRANIQTIRSNLQSIETNLRNLNRNFISRRIVESLHDKLKQTFDVILQTETAFKSWLQEQ 113
++ NI I+ N+ E NL NL N IS+RI+E+LH++++Q + +++TE F+ W +
Sbjct: 26 IKDNILLIKKNMIYAEENLENLKNNLISKRIIEALHEEIQQIYVKVIETENLFRDW---E 82
Query: 114 QQTAEAEIDSIEKQRDKFLFEKLFAHFQAEIRRVQDLSDQVRLAA 158
+ AE + EKQ+ K++FEKL HF+ E+ +++ +S V+ AA
Sbjct: 83 IKFAE---NPFEKQKKKYIFEKLNIHFKNEVNKLESISVNVKKAA 124
>gi|156101762|ref|XP_001616574.1| syntaxin 5 [Plasmodium vivax SaI-1]
gi|148805448|gb|EDL46847.1| syntaxin 5, putative [Plasmodium vivax]
Length = 319
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 68/105 (64%), Gaps = 6/105 (5%)
Query: 54 VRANIQTIRSNLQSIETNLRNLNRNFISRRIVESLHDKLKQTFDVILQTETAFKSWLQEQ 113
++ NI I+ N+ E NL NL N IS+RI+E+LH++++Q + +++TE F+ W +
Sbjct: 26 IKDNILLIKKNMIYAEENLENLKNNLISKRIIEALHEEIQQIYVKVIETENLFRDW---E 82
Query: 114 QQTAEAEIDSIEKQRDKFLFEKLFAHFQAEIRRVQDLSDQVRLAA 158
+ AE + EKQ+ K++FEKL HF+ E+ +++ +S V+ AA
Sbjct: 83 IKFAE---NPFEKQKKKYIFEKLNIHFKNEVNKLESISVNVKKAA 124
>gi|68525554|ref|XP_723636.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL]
gi|23477993|gb|EAA15201.1| hypothetical protein [Plasmodium yoelii yoelii]
Length = 333
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 68/105 (64%), Gaps = 6/105 (5%)
Query: 54 VRANIQTIRSNLQSIETNLRNLNRNFISRRIVESLHDKLKQTFDVILQTETAFKSWLQEQ 113
++ NI I+ N+ E NL NL N IS+RI+ESLH+++ Q + +++TE F+ W +
Sbjct: 26 IKDNILLIKKNMIYAEENLENLKNNLISKRIIESLHEEIHQIYVKVIETENLFRDW---E 82
Query: 114 QQTAEAEIDSIEKQRDKFLFEKLFAHFQAEIRRVQDLSDQVRLAA 158
+ +E + EKQ+ K++FEKL HF+ E+ +++++S V+ AA
Sbjct: 83 IKFSE---NPFEKQKKKYIFEKLNIHFKNEVNKLENISLNVKRAA 124
>gi|70953656|ref|XP_745915.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56526384|emb|CAH80302.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 309
Score = 76.3 bits (186), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 68/105 (64%), Gaps = 6/105 (5%)
Query: 54 VRANIQTIRSNLQSIETNLRNLNRNFISRRIVESLHDKLKQTFDVILQTETAFKSWLQEQ 113
++ NI I+ N+ E NL NL N IS+RI+ESLH+++ Q + +++TE F+ W +
Sbjct: 26 IKDNILLIKKNMIYAEENLENLKNNLISKRIIESLHEEIHQIYVKVIETENLFRDW---E 82
Query: 114 QQTAEAEIDSIEKQRDKFLFEKLFAHFQAEIRRVQDLSDQVRLAA 158
+ +E + EKQ+ K++FEKL HF+ E+ +++++S V+ AA
Sbjct: 83 IKFSE---NPFEKQQKKYIFEKLNIHFKNEVNKLENISLNVKRAA 124
>gi|124805687|ref|XP_001350510.1| Qa-SNARE protein, putative [Plasmodium falciparum 3D7]
gi|23496633|gb|AAN36190.1| Qa-SNARE protein, putative [Plasmodium falciparum 3D7]
gi|109692365|gb|ABG38019.1| SNARE protein [Plasmodium falciparum]
Length = 310
Score = 75.9 bits (185), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 69/105 (65%), Gaps = 6/105 (5%)
Query: 54 VRANIQTIRSNLQSIETNLRNLNRNFISRRIVESLHDKLKQTFDVILQTETAFKSWLQEQ 113
++ NI I+ N+ E NL NL N IS+RI+E+LH++++Q + +++TE F+ W +
Sbjct: 30 IKDNILLIKKNMIYAEENLENLKNNLISKRIIEALHEEIQQIYVKVVETEHLFREW---E 86
Query: 114 QQTAEAEIDSIEKQRDKFLFEKLFAHFQAEIRRVQDLSDQVRLAA 158
+ AE + EKQ+ K++FEKL HF+ E+ +++++S V+ AA
Sbjct: 87 IRFAE---NPFEKQKKKYIFEKLNIHFKNEVNKLENISINVKKAA 128
>gi|156083899|ref|XP_001609433.1| hypothetical protein [Babesia bovis T2Bo]
gi|154796684|gb|EDO05865.1| conserved hypothetical protein [Babesia bovis]
Length = 250
Score = 51.6 bits (122), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 65/128 (50%), Gaps = 15/128 (11%)
Query: 44 SLGPRS--YDAIVRANIQTIRSNLQSIETNLRNLNRNFISRRIVESLHDKLKQTFDVILQ 101
S GP + Y+ ++ N+Q IR+ + E N+ +L+ F+S+R++ ++ +K+ F +I
Sbjct: 10 SFGPSNLKYEKLIATNLQHIRAEILYTEHNIGDLSNRFVSQRLLVTIQNKIDNVFALISV 69
Query: 102 TETAFKSWLQEQQQTAEAEIDSIEKQRD-KFLFEKLFAHFQAEIRRVQDLSDQVR----L 156
TE W E++I D + +KL A F E+ R + L+D+V+ +
Sbjct: 70 TEGYLSEW--------ESDIARYPGLLDSRASLDKLKAQFNREVSRARQLADEVKSRSHM 121
Query: 157 AAERTNNP 164
A T NP
Sbjct: 122 ATSDTVNP 129
>gi|85000701|ref|XP_955069.1| syntaxin [Theileria annulata strain Ankara]
gi|65303215|emb|CAI75593.1| syntaxin, putative [Theileria annulata]
Length = 305
Score = 49.3 bits (116), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 58/105 (55%), Gaps = 7/105 (6%)
Query: 50 YDAIVRANIQTIRSNLQSIETNLRNLNRNFISRRIVESLHDKLKQTFDVILQTETAFKSW 109
Y+ +V NI+ I++++ I+ N+ +L+ F S +++E+L +KL+ +I T+ W
Sbjct: 52 YEKLVSNNIKHIKADILYIQHNVGDLSNKFYSNKLLETLRNKLENVNSLISVTKGYLVEW 111
Query: 110 LQEQQQTAEAEIDSIEKQRDKFLFEKLFAHFQAEIRRVQDLSDQV 154
+ QQ+ Q ++ ++KL+ FQ EI + +LSD +
Sbjct: 112 ELQIQQSPNL-------QYNENNYQKLYNQFQREITHINNLSDMI 149
>gi|224110232|ref|XP_002333124.1| cc-nbs resistance protein [Populus trichocarpa]
gi|222834935|gb|EEE73384.1| cc-nbs resistance protein [Populus trichocarpa]
Length = 486
Score = 38.9 bits (89), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 56/114 (49%), Gaps = 9/114 (7%)
Query: 54 VRANIQTIRSNLQSIETNLRNLNRNFISRRIVESLHDKLKQTF----DVILQTETAFKSW 109
V+ + ++SNL +I++ L + +R + + V DKLK DV+ + +A +W
Sbjct: 31 VKKQVDKLKSNLIAIQSVLEDADRKQVKDKAVRDWVDKLKDVCYDMDDVLDEWSSAILTW 90
Query: 110 LQEQQQTAEAEIDSIEKQRDKFLFEKLFAHFQAEIRRVQDLSDQVRLAAERTNN 163
E+ AE S++K R FL F Q RR D++ +++ E+ ++
Sbjct: 91 KMEE---AEENTRSLQKMRCSFLGSPCFCLNQVGRRR--DIALKIKEVCEKVDD 139
>gi|154175433|ref|YP_001407766.1| KWG [Campylobacter curvus 525.92]
gi|112802493|gb|EAT99837.1| KWG [Campylobacter curvus 525.92]
Length = 749
Score = 37.0 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 28/96 (29%), Positives = 49/96 (51%), Gaps = 18/96 (18%)
Query: 64 NLQSIETNLRNLNRNFISRRIVESLHDKLKQTFDVILQT-ETAFKSWLQEQQQTAEAEID 122
NL++ +L N +N R I++S D+L + F V++ + ETA+K
Sbjct: 27 NLETDIFSLFNFEKNQNERYILKSAQDELAKEFVVLVNSKETAYK--------------- 71
Query: 123 SIEKQRDKF-LFEKLFAHFQAEIRRVQDLSDQVRLA 157
I+ DK LFEK F F+ +++ QD ++++A
Sbjct: 72 -IKDIADKSGLFEKFFVSFETDVKEYQDELKRLKIA 106
>gi|224114798|ref|XP_002332285.1| cc-nbs resistance protein [Populus trichocarpa]
gi|222832447|gb|EEE70924.1| cc-nbs resistance protein [Populus trichocarpa]
Length = 614
Score = 37.0 bits (84), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 54/114 (47%), Gaps = 9/114 (7%)
Query: 54 VRANIQTIRSNLQSIETNLRNLNRNFISRRIVESLHDKLKQTF----DVILQTETAFKSW 109
V+ + ++SNL I++ L + R + + V DKLK DV+ + +A +W
Sbjct: 31 VKKQVDKLKSNLIVIQSVLEDAERKQVKDKAVRDWVDKLKDVCYDMDDVLDEWSSAILTW 90
Query: 110 LQEQQQTAEAEIDSIEKQRDKFLFEKLFAHFQAEIRRVQDLSDQVRLAAERTNN 163
E+ AE S++K R FL F Q RR D++ +++ E+ ++
Sbjct: 91 KMEE---AEENTRSLQKMRCSFLGSPCFCLNQVVRRR--DIALKIKEVCEKVDD 139
>gi|224122712|ref|XP_002318907.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
gi|222859580|gb|EEE97127.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
Length = 945
Score = 36.6 bits (83), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 56/114 (49%), Gaps = 9/114 (7%)
Query: 54 VRANIQTIRSNLQSIETNLRNLNRNFISRRIVESLHDKLKQTF----DVILQTETAFKSW 109
V+ + ++SNL I++ L + +R + + V DKLK DV+ + TA W
Sbjct: 31 VKKQVDKLKSNLLDIQSVLEDADRKQVKDKAVRDWVDKLKDACYDMDDVLDEWSTAILRW 90
Query: 110 LQEQQQTAEAEIDSIEKQRDKFLFEKLFAHFQAEIRRVQDLSDQVRLAAERTNN 163
E+ AE S +K R FL F F +RR +D++ +++ +E+ ++
Sbjct: 91 KMEE---AEENTHSRQKIRCSFLGSPCFC-FNQVVRR-RDIALKIKEVSEKVDD 139
>gi|224114836|ref|XP_002332294.1| cc-nbs resistance protein [Populus trichocarpa]
gi|222832456|gb|EEE70933.1| cc-nbs resistance protein [Populus trichocarpa]
Length = 477
Score = 35.8 bits (81), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 52/113 (46%), Gaps = 9/113 (7%)
Query: 54 VRANIQTIRSNLQSIETNLRNLNRNFISRRIVESLHDKLKQTF----DVILQTETAFKSW 109
V+ + ++SNL +I++ L + +R + + V DKLK DV+ + TA W
Sbjct: 31 VKKQVDKLKSNLLAIQSVLEDADRKQVKDKAVRDWADKLKDVCYDMDDVLDEWSTAILRW 90
Query: 110 LQEQQQTAEAEIDSIEKQRDKFLFEKLFAHFQAEIRRVQDLSDQVRLAAERTN 162
+ AE S +K R FL F Q RR D++ +++ E+ +
Sbjct: 91 ---KMGEAEENTHSQQKMRCSFLGSPCFCFNQVARRR--DIALKIKEVCEKVD 138
>gi|168211337|ref|ZP_02636962.1| KID repeat family protein [Clostridium perfringens B str. ATCC 3626]
gi|170710632|gb|EDT22814.1| KID repeat family protein [Clostridium perfringens B str. ATCC 3626]
Length = 1778
Score = 35.4 bits (80), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 46/96 (47%), Gaps = 4/96 (4%)
Query: 54 VRANIQTIRSNLQSIETNLRNLNRNFISRRIVESLHDKLKQTFDVILQTETAFKSWLQEQ 113
++A++Q + S QSI TN+ N+NR+ IS+ + S D K F + T A + QE
Sbjct: 1007 IKASVQDLNSTTQSITTNVSNINRDLISK--INSNLDAAKN-FATDIATNKA-NTAKQEA 1062
Query: 114 QQTAEAEIDSIEKQRDKFLFEKLFAHFQAEIRRVQD 149
+A + DSI + A AEI V +
Sbjct: 1063 ISSANSHADSIAASKATEALNNAKAFVNAEITTVNN 1098
>gi|224122696|ref|XP_002318903.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
gi|222859576|gb|EEE97123.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
Length = 906
Score = 35.4 bits (80), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 54/114 (47%), Gaps = 9/114 (7%)
Query: 54 VRANIQTIRSNLQSIETNLRNLNRNFISRRIVESLHDKLKQTF----DVILQTETAFKSW 109
V+ ++SNL I++ L + +R + + V DKLK DV+ + TA W
Sbjct: 31 VKKQCDKLKSNLLDIQSVLEDADRKQVKDKAVRDWLDKLKDACYDMDDVLDEWSTAILRW 90
Query: 110 LQEQQQTAEAEIDSIEKQRDKFLFEKLFAHFQAEIRRVQDLSDQVRLAAERTNN 163
E+ AE S +K R FL F F +RR +D++ +++ E+ ++
Sbjct: 91 KMEE---AEENTRSRQKMRCSFLRSPCFC-FNQVVRR-RDIALKIKEVCEKVDD 139
>gi|298530751|ref|ZP_07018153.1| ribonuclease R [Desulfonatronospira thiodismutans ASO3-1]
gi|298510125|gb|EFI34029.1| ribonuclease R [Desulfonatronospira thiodismutans ASO3-1]
Length = 702
Score = 35.4 bits (80), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 46/102 (45%), Gaps = 6/102 (5%)
Query: 35 LVDEREALRSLGPRSYDAIVRANIQTIRS---NLQSIETNLRNLNRNFISRRIVESLHDK 91
LV R R LG D +A +++++ +L S+E + R + R + SL DK
Sbjct: 561 LVVHRALKRELG---MDVQFKARMKSLKKTGESLSSLERKAVDAEREILKRATIISLKDK 617
Query: 92 LKQTFDVILQTETAFKSWLQEQQQTAEAEIDSIEKQRDKFLF 133
Q+F I+ + T F W++ AE + D ++F
Sbjct: 618 TGQSFSGIVASITDFGFWVELTDIMAEGMVRLSSLSDDYYVF 659
>gi|71027517|ref|XP_763402.1| hypothetical protein [Theileria parva strain Muguga]
gi|68350355|gb|EAN31119.1| hypothetical protein TP03_0383 [Theileria parva]
Length = 258
Score = 35.0 bits (79), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 7/81 (8%)
Query: 75 LNRNFISRRIVESLHDKLKQTFDVILQTETAFKSWLQEQQQTAEAEIDSIEKQRDKFLFE 134
L+ F S +++E+L +KL+ +I T+ W + QQ+ Q ++ +
Sbjct: 26 LSNKFYSNKLLETLRNKLENVNSLISVTKGYLMEWELQIQQSPNL-------QYNENNYH 78
Query: 135 KLFAHFQAEIRRVQDLSDQVR 155
KL+ FQ EI + LSD +
Sbjct: 79 KLYNQFQREITHINSLSDMIN 99
>gi|224114840|ref|XP_002332295.1| cc-nbs resistance protein [Populus trichocarpa]
gi|222832457|gb|EEE70934.1| cc-nbs resistance protein [Populus trichocarpa]
Length = 566
Score = 35.0 bits (79), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 43/97 (44%), Gaps = 7/97 (7%)
Query: 54 VRANIQTIRSNLQSIETNLRNLNRNFISRRIVESLHDKLKQTFDVILQTETAFKSW---- 109
V+ ++ ++SNL +I++ L + +R + + V DKLK DV + W
Sbjct: 31 VKKHVDKLKSNLLAIQSVLEDADRKQVKDKAVRDWLDKLK---DVCYDIDDVLDEWSTEI 87
Query: 110 LQEQQQTAEAEIDSIEKQRDKFLFEKLFAHFQAEIRR 146
L + AE DS++K R F F Q RR
Sbjct: 88 LTWKMGDAEQYTDSLQKMRCSFQRSPCFCFNQVVRRR 124
>gi|153829065|ref|ZP_01981732.1| hypothetical protein A59_A0440 [Vibrio cholerae 623-39]
gi|148875494|gb|EDL73629.1| hypothetical protein A59_A0440 [Vibrio cholerae 623-39]
Length = 333
Score = 35.0 bits (79), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 60/129 (46%), Gaps = 28/129 (21%)
Query: 43 RSLGPRSYDAIVRANIQTIRSNLQSIETNLRNL----NRNFISRRIVESLHD---KLKQT 95
RSL P+S +A+ RA+I +SN+ TNL + +R F I ES D K+K +
Sbjct: 81 RSLSPQSPEAVWRAHIDNKQSNIDLGITNLMEVSQLSSRKFSGLPIDESFADINEKVKSS 140
Query: 96 FDVILQTETAFKSWLQEQQQTAEAEIDSIEKQRDKFLFEKLFAHFQAEIRRVQDLSDQVR 155
D +L + Q A +I+S+++ F+ F++ Q ++ DQ+R
Sbjct: 141 LDALLSN---------CENQLASIDIESLDEP-----FKSYFSNMQGQM-------DQLR 179
Query: 156 LAAERTNNP 164
+ A P
Sbjct: 180 VKAATLQAP 188
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
Posted date: Jul 22, 2011 4:42 PM
Number of letters in database: 5,058,227,080
Number of sequences in database: 14,777,732
Lambda K H
0.315 0.130 0.357
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 14777732
Number of Hits to DB: 1,868,838,363
Number of extensions: 64043624
Number of successful extensions: 219681
Number of sequences better than 10.0: 117
Number of HSP's gapped: 223477
Number of HSP's successfully gapped: 117
Length of query: 227
Length of database: 5,058,227,080
Length adjustment: 134
Effective length of query: 93
Effective length of database: 3,078,010,992
Effective search space: 286255022256
Effective search space used: 286255022256
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 79 (35.0 bits)