BLASTP 2.2.24 [Aug-08-2010]
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eten_4640_orf3
(117 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
14,777,732 sequences; 5,058,227,080 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|237833767|ref|XP_002366181.1| 40S ribosomal protein S18, puta... 104 4e-21
gi|325118781|emb|CBZ54332.1| putative 40S ribosomal protein S18 ... 103 1e-20
gi|68069309|ref|XP_676565.1| ribosomal protein S18 [Plasmodium b... 95 4e-18
gi|70943818|ref|XP_741909.1| ribosomal protein S18 [Plasmodium c... 95 4e-18
gi|258569403|ref|XP_002543505.1| 40S ribosomal protein S18 [Unci... 94 5e-18
gi|119196879|ref|XP_001249043.1| 40S ribosomal protein S18 [Cocc... 94 5e-18
gi|156098723|ref|XP_001615377.1| 40S ribosomal protein S18 [Plas... 94 5e-18
gi|221056254|ref|XP_002259265.1| ribosomal protein s18 [Plasmodi... 94 6e-18
gi|124804238|ref|XP_001347943.1| 40S ribosomal protein S18, puta... 94 8e-18
gi|84999324|ref|XP_954383.1| ribosomal protein s18 [Theileria an... 93 1e-17
gi|71032473|ref|XP_765878.1| 40S ribosomal protein S18 [Theileri... 93 1e-17
gi|160550173|gb|ABX44791.1| putative 40S ribosomal protein RPS18... 93 1e-17
gi|169784886|ref|XP_001826904.1| 40S ribosomal protein S18 [Aspe... 92 2e-17
gi|302500473|ref|XP_003012230.1| hypothetical protein ARB_01490 ... 92 3e-17
gi|315048097|ref|XP_003173423.1| 40S ribosomal protein S18 [Arth... 92 3e-17
gi|159145774|gb|ABW90424.1| putative ribosomal protein S18 [Bare... 92 4e-17
gi|326485535|gb|EGE09545.1| 30S ribosomal protein S13p/S18e [Tri... 91 4e-17
gi|255946732|ref|XP_002564133.1| Pc22g00880 [Penicillium chrysog... 91 5e-17
gi|66359256|ref|XP_626806.1| ribosomal protein S18A, rps18ap, Hh... 91 5e-17
gi|145240679|ref|XP_001392986.1| 40S ribosomal protein S18 [Aspe... 91 5e-17
gi|291228799|ref|XP_002734364.1| PREDICTED: ribosomal protein S1... 91 5e-17
gi|320587800|gb|EFX00275.1| 40S ribosomal protein s18 [Grosmanni... 91 5e-17
gi|188572482|gb|ACD65147.1| putative 40S ribosomal protein RPS18... 91 7e-17
gi|296809581|ref|XP_002845129.1| 40S ribosomal protein S18 [Arth... 91 8e-17
gi|339474972|gb|EGP90064.1| hypothetical protein MYCGRDRAFT_5570... 90 9e-17
gi|295668839|ref|XP_002794968.1| 40S ribosomal protein S18 [Para... 90 9e-17
gi|154270985|ref|XP_001536346.1| 40S ribosomal protein S18 [Ajel... 90 1e-16
gi|261188787|ref|XP_002620807.1| ribosomal protein S13/S18 [Ajel... 90 1e-16
gi|67538542|ref|XP_663045.1| hypothetical protein AN5441.2 [Aspe... 90 1e-16
gi|119473095|ref|XP_001258494.1| ribosomal protein S13p/S18e [Ne... 90 1e-16
>gi|237833767|ref|XP_002366181.1| 40S ribosomal protein S18, putative [Toxoplasma gondii ME49]
gi|211963845|gb|EEA99040.1| 40S ribosomal protein S18, putative [Toxoplasma gondii ME49]
gi|221486391|gb|EEE24652.1| 40S ribosomal protein S18, putative [Toxoplasma gondii GT1]
gi|221508170|gb|EEE33757.1| 40S ribosomal protein S18, putative [Toxoplasma gondii VEG]
Length = 156
Score = 104 bits (259), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 45/64 (70%), Positives = 50/64 (78%)
Query: 30 QIVAIVGSPTQFSIPSWFLTRQKDVKDGKSPPVSANNLDSFWREDFERLKKMRLPRGLRP 89
++VAI +P QF IP+WFL RQKDVKDGK V AN LD+ WRED ERLKKMRL RGLR
Sbjct: 68 KVVAIASTPQQFKIPTWFLNRQKDVKDGKHKHVVANGLDTVWREDLERLKKMRLHRGLRH 127
Query: 90 YWGL 93
YWGL
Sbjct: 128 YWGL 131
>gi|325118781|emb|CBZ54332.1| putative 40S ribosomal protein S18 [Neospora caninum Liverpool]
Length = 156
Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 44/64 (68%), Positives = 50/64 (78%)
Query: 30 QIVAIVGSPTQFSIPSWFLTRQKDVKDGKSPPVSANNLDSFWREDFERLKKMRLPRGLRP 89
++VAI +P QF IP+WFL RQKDV+DGK V AN LD+ WRED ERLKKMRL RGLR
Sbjct: 68 KVVAIASTPQQFKIPTWFLNRQKDVRDGKHKHVVANGLDTVWREDLERLKKMRLHRGLRH 127
Query: 90 YWGL 93
YWGL
Sbjct: 128 YWGL 131
>gi|68069309|ref|XP_676565.1| ribosomal protein S18 [Plasmodium berghei strain ANKA]
gi|82794396|ref|XP_728420.1| ribosomal protein S13/S18 [Plasmodium yoelii yoelii str. 17XNL]
gi|23484766|gb|EAA19985.1| ribosomal protein S13/S18 [Plasmodium yoelii yoelii]
gi|56496322|emb|CAH96119.1| ribosomal protein S18, putative [Plasmodium berghei]
Length = 156
Score = 94.7 bits (234), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 40/64 (62%), Positives = 50/64 (78%)
Query: 30 QIVAIVGSPTQFSIPSWFLTRQKDVKDGKSPPVSANNLDSFWREDFERLKKMRLPRGLRP 89
IV I+ SP+QF IP WFL R++D+KDGK+ V AN LDS+ RED ER+KK+RL RGLR
Sbjct: 68 NIVHIMSSPSQFKIPDWFLNRRRDIKDGKNLHVIANQLDSYLREDLERMKKIRLHRGLRH 127
Query: 90 YWGL 93
+WGL
Sbjct: 128 HWGL 131
>gi|70943818|ref|XP_741909.1| ribosomal protein S18 [Plasmodium chabaudi chabaudi]
gi|56520588|emb|CAH81563.1| ribosomal protein S18, putative [Plasmodium chabaudi chabaudi]
Length = 156
Score = 94.7 bits (234), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 40/64 (62%), Positives = 50/64 (78%)
Query: 30 QIVAIVGSPTQFSIPSWFLTRQKDVKDGKSPPVSANNLDSFWREDFERLKKMRLPRGLRP 89
IV I+ SP+QF IP WFL R++D+KDGK+ V AN LDS+ RED ER+KK+RL RGLR
Sbjct: 68 NIVHIMSSPSQFKIPDWFLNRRRDIKDGKNLHVIANQLDSYLREDLERMKKIRLHRGLRH 127
Query: 90 YWGL 93
+WGL
Sbjct: 128 HWGL 131
>gi|258569403|ref|XP_002543505.1| 40S ribosomal protein S18 [Uncinocarpus reesii 1704]
gi|237903775|gb|EEP78176.1| 40S ribosomal protein S18 [Uncinocarpus reesii 1704]
Length = 157
Score = 94.4 bits (233), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 40/64 (62%), Positives = 49/64 (76%)
Query: 30 QIVAIVGSPTQFSIPSWFLTRQKDVKDGKSPPVSANNLDSFWREDFERLKKMRLPRGLRP 89
+IV I+ +PTQ+ IP+WFL RQ+D+ DGK V ANN+DS RED ERLKK+R RGLR
Sbjct: 70 RIVTIIQNPTQYKIPTWFLNRQRDITDGKDSQVLANNMDSKLREDLERLKKIRAHRGLRH 129
Query: 90 YWGL 93
YWGL
Sbjct: 130 YWGL 133
>gi|119196879|ref|XP_001249043.1| 40S ribosomal protein S18 [Coccidioides immitis RS]
gi|303322136|ref|XP_003071061.1| 40S ribosomal protein S18, putative [Coccidioides posadasii C735
delta SOWgp]
gi|240110760|gb|EER28916.1| 40S ribosomal protein S18, putative [Coccidioides posadasii C735
delta SOWgp]
gi|320032724|gb|EFW14675.1| 40S ribosomal protein S18 [Coccidioides posadasii str. Silveira]
Length = 155
Score = 94.4 bits (233), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 40/64 (62%), Positives = 49/64 (76%)
Query: 30 QIVAIVGSPTQFSIPSWFLTRQKDVKDGKSPPVSANNLDSFWREDFERLKKMRLPRGLRP 89
+IV I+ +PTQ+ IP+WFL RQ+D+ DGK V ANN+DS RED ERLKK+R RGLR
Sbjct: 68 RIVTIIQNPTQYKIPTWFLNRQRDITDGKDSQVLANNMDSKLREDLERLKKIRAHRGLRH 127
Query: 90 YWGL 93
YWGL
Sbjct: 128 YWGL 131
>gi|156098723|ref|XP_001615377.1| 40S ribosomal protein S18 [Plasmodium vivax SaI-1]
gi|148804251|gb|EDL45650.1| 40S ribosomal protein S18, putative [Plasmodium vivax]
Length = 156
Score = 94.4 bits (233), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 40/63 (63%), Positives = 50/63 (79%)
Query: 31 IVAIVGSPTQFSIPSWFLTRQKDVKDGKSPPVSANNLDSFWREDFERLKKMRLPRGLRPY 90
IV I+ +P+QF IP WFL R+KDVK+GK+ V AN LDS+ RED ER+KK+RL RGLR +
Sbjct: 69 IVHIMNAPSQFKIPDWFLNRRKDVKEGKNLHVIANQLDSYLREDLERMKKIRLHRGLRHH 128
Query: 91 WGL 93
WGL
Sbjct: 129 WGL 131
>gi|221056254|ref|XP_002259265.1| ribosomal protein s18 [Plasmodium knowlesi strain H]
gi|193809336|emb|CAQ40038.1| ribosomal protein s18, putative [Plasmodium knowlesi strain H]
Length = 156
Score = 94.0 bits (232), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 40/63 (63%), Positives = 50/63 (79%)
Query: 31 IVAIVGSPTQFSIPSWFLTRQKDVKDGKSPPVSANNLDSFWREDFERLKKMRLPRGLRPY 90
IV I+ +P+QF IP WFL R+KDVK+GK+ V AN LDS+ RED ER+KK+RL RGLR +
Sbjct: 69 IVHIMNAPSQFKIPDWFLNRRKDVKEGKNLHVIANQLDSYLREDLERMKKIRLHRGLRHH 128
Query: 91 WGL 93
WGL
Sbjct: 129 WGL 131
>gi|124804238|ref|XP_001347943.1| 40S ribosomal protein S18, putative [Plasmodium falciparum 3D7]
gi|23496197|gb|AAN35856.1| 40S ribosomal protein S18, putative [Plasmodium falciparum 3D7]
Length = 156
Score = 93.6 bits (231), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 40/64 (62%), Positives = 50/64 (78%)
Query: 30 QIVAIVGSPTQFSIPSWFLTRQKDVKDGKSPPVSANNLDSFWREDFERLKKMRLPRGLRP 89
IV I+ +PTQF IP WFL R+KD+K+GK+ V AN LDS+ RED ER+KK+RL RGLR
Sbjct: 68 NIVHIMSTPTQFKIPDWFLNRRKDLKEGKNIHVIANQLDSYLREDLERMKKIRLHRGLRH 127
Query: 90 YWGL 93
+WGL
Sbjct: 128 HWGL 131
>gi|84999324|ref|XP_954383.1| ribosomal protein s18 [Theileria annulata]
gi|65305381|emb|CAI73706.1| ribosomal protein s18, putative [Theileria annulata]
Length = 154
Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/64 (64%), Positives = 49/64 (76%)
Query: 30 QIVAIVGSPTQFSIPSWFLTRQKDVKDGKSPPVSANNLDSFWREDFERLKKMRLPRGLRP 89
++VAI+ SP +F +P WFL RQKDVK+GK ++N LDS RED ERLKKMRL RGLR
Sbjct: 68 KLVAIISSPAEFKVPHWFLNRQKDVKEGKHMHNASNLLDSCLREDLERLKKMRLHRGLRH 127
Query: 90 YWGL 93
YWGL
Sbjct: 128 YWGL 131
>gi|71032473|ref|XP_765878.1| 40S ribosomal protein S18 [Theileria parva strain Muguga]
gi|68352835|gb|EAN33595.1| 40S ribosomal protein S18, putative [Theileria parva]
Length = 154
Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/64 (64%), Positives = 49/64 (76%)
Query: 30 QIVAIVGSPTQFSIPSWFLTRQKDVKDGKSPPVSANNLDSFWREDFERLKKMRLPRGLRP 89
++VAI+ SP +F +P WFL RQKDVK+GK ++N LDS RED ERLKKMRL RGLR
Sbjct: 68 KLVAIISSPAEFKVPHWFLNRQKDVKEGKHMHNASNLLDSCLREDLERLKKMRLHRGLRH 127
Query: 90 YWGL 93
YWGL
Sbjct: 128 YWGL 131
>gi|160550173|gb|ABX44791.1| putative 40S ribosomal protein RPS18 [Flustra foliacea]
Length = 152
Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 38/64 (59%), Positives = 49/64 (76%)
Query: 30 QIVAIVGSPTQFSIPSWFLTRQKDVKDGKSPPVSANNLDSFWREDFERLKKMRLPRGLRP 89
Q+V I+ +P Q+ IP W+L RQ+D+KDGK+ V AN LD+ RED ER+KK+RL RGLR
Sbjct: 66 QVVTIMSNPRQYKIPDWYLNRQRDIKDGKTSQVIANGLDNKMREDMERMKKIRLHRGLRH 125
Query: 90 YWGL 93
YWGL
Sbjct: 126 YWGL 129
>gi|169784886|ref|XP_001826904.1| 40S ribosomal protein S18 [Aspergillus oryzae RIB40]
gi|238507888|ref|XP_002385145.1| ribosomal protein S13p/S18e [Aspergillus flavus NRRL3357]
gi|83775651|dbj|BAE65771.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220688664|gb|EED45016.1| ribosomal protein S13p/S18e [Aspergillus flavus NRRL3357]
Length = 155
Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 39/64 (60%), Positives = 49/64 (76%)
Query: 30 QIVAIVGSPTQFSIPSWFLTRQKDVKDGKSPPVSANNLDSFWREDFERLKKMRLPRGLRP 89
++V I+ +PTQ+ IP+WFL RQ+D+ DGK V +NNLDS RED ERLKK+R RGLR
Sbjct: 68 RVVTILQNPTQYKIPTWFLNRQRDITDGKDSQVVSNNLDSKMREDLERLKKIRSHRGLRH 127
Query: 90 YWGL 93
YWGL
Sbjct: 128 YWGL 131
>gi|302500473|ref|XP_003012230.1| hypothetical protein ARB_01490 [Arthroderma benhamiae CBS 112371]
gi|302652150|ref|XP_003017934.1| hypothetical protein TRV_08054 [Trichophyton verrucosum HKI 0517]
gi|327292934|ref|XP_003231164.1| 40S ribosomal protein S18 [Trichophyton rubrum CBS 118892]
gi|291175787|gb|EFE31590.1| hypothetical protein ARB_01490 [Arthroderma benhamiae CBS 112371]
gi|291181521|gb|EFE37289.1| hypothetical protein TRV_08054 [Trichophyton verrucosum HKI 0517]
gi|326466583|gb|EGD92036.1| 40S ribosomal protein S18 [Trichophyton rubrum CBS 118892]
gi|326473764|gb|EGD97773.1| 40S ribosomal protein S18 [Trichophyton tonsurans CBS 112818]
Length = 155
Score = 91.7 bits (226), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 39/64 (60%), Positives = 48/64 (75%)
Query: 30 QIVAIVGSPTQFSIPSWFLTRQKDVKDGKSPPVSANNLDSFWREDFERLKKMRLPRGLRP 89
+IV I+ +PTQ+ IP+WFL RQ+D+ DGK V AN +DS RED ERLKK+R RGLR
Sbjct: 68 RIVTIIQNPTQYKIPTWFLNRQRDITDGKDTQVLANQMDSKLREDLERLKKIRAHRGLRH 127
Query: 90 YWGL 93
YWGL
Sbjct: 128 YWGL 131
>gi|315048097|ref|XP_003173423.1| 40S ribosomal protein S18 [Arthroderma gypseum CBS 118893]
gi|311341390|gb|EFR00593.1| 40S ribosomal protein S18 [Arthroderma gypseum CBS 118893]
Length = 155
Score = 91.7 bits (226), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 39/64 (60%), Positives = 48/64 (75%)
Query: 30 QIVAIVGSPTQFSIPSWFLTRQKDVKDGKSPPVSANNLDSFWREDFERLKKMRLPRGLRP 89
+IV I+ +PTQ+ IP+WFL RQ+D+ DGK V AN +DS RED ERLKK+R RGLR
Sbjct: 68 RIVTIIQNPTQYKIPTWFLNRQRDITDGKDSQVLANQMDSKLREDLERLKKIRAHRGLRH 127
Query: 90 YWGL 93
YWGL
Sbjct: 128 YWGL 131
>gi|159145774|gb|ABW90424.1| putative ribosomal protein S18 [Barentsia elongata]
Length = 154
Score = 91.7 bits (226), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 38/63 (60%), Positives = 48/63 (76%)
Query: 31 IVAIVGSPTQFSIPSWFLTRQKDVKDGKSPPVSANNLDSFWREDFERLKKMRLPRGLRPY 90
+V I+ +P Q+ IP+WFL RQKD+KDGK V++N LD+ RED ERLKK+R RGLR Y
Sbjct: 67 VVTIINNPKQYKIPNWFLNRQKDIKDGKYMQVTSNGLDNKLREDLERLKKIRAHRGLRHY 126
Query: 91 WGL 93
WGL
Sbjct: 127 WGL 129
>gi|326485535|gb|EGE09545.1| 30S ribosomal protein S13p/S18e [Trichophyton equinum CBS 127.97]
Length = 103
Score = 91.3 bits (225), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 42/80 (52%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 14 CCSPXXXXXXXXXXXXQIVAIVGSPTQFSIPSWFLTRQKDVKDGKSPPVSANNLDSFWRE 73
CCS +IV I+ +PTQ+ IP+WFL RQ+D+ DGK V AN +DS RE
Sbjct: 3 CCSAGEISSEELE---RIVTIIQNPTQYKIPTWFLNRQRDITDGKDTQVLANQMDSKLRE 59
Query: 74 DFERLKKMRLPRGLRPYWGL 93
D ERLKK+R RGLR YWGL
Sbjct: 60 DLERLKKIRAHRGLRHYWGL 79
>gi|255946732|ref|XP_002564133.1| Pc22g00880 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211591150|emb|CAP97376.1| Pc22g00880 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 155
Score = 91.3 bits (225), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 40/64 (62%), Positives = 48/64 (75%)
Query: 30 QIVAIVGSPTQFSIPSWFLTRQKDVKDGKSPPVSANNLDSFWREDFERLKKMRLPRGLRP 89
+IV I+ +PTQ+ IPSWFL RQ+D+ DGK V +N LDS RED ERLKK+R RGLR
Sbjct: 68 RIVTILQTPTQYKIPSWFLNRQRDITDGKDTQVVSNGLDSKLREDLERLKKIRSHRGLRH 127
Query: 90 YWGL 93
YWGL
Sbjct: 128 YWGL 131
>gi|66359256|ref|XP_626806.1| ribosomal protein S18A, rps18ap, HhH domain [Cryptosporidium parvum
Iowa II]
gi|67616771|ref|XP_667506.1| ribosomal protein S18 [Cryptosporidium hominis TU502]
gi|46228176|gb|EAK89075.1| ribosomal protein S18A, rps18ap, HhH domain [Cryptosporidium parvum
Iowa II]
gi|54658642|gb|EAL37270.1| ribosomal protein S18 [Cryptosporidium hominis]
Length = 153
Score = 91.3 bits (225), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 39/64 (60%), Positives = 51/64 (79%)
Query: 30 QIVAIVGSPTQFSIPSWFLTRQKDVKDGKSPPVSANNLDSFWREDFERLKKMRLPRGLRP 89
+IVAIV +P QF+IPS+ L RQKDVKDGK +++NNL++ RED ERLKK+R RGLR
Sbjct: 67 RIVAIVANPLQFNIPSYMLNRQKDVKDGKYKHITSNNLEASLREDLERLKKIRSHRGLRH 126
Query: 90 YWGL 93
+WG+
Sbjct: 127 HWGV 130
>gi|145240679|ref|XP_001392986.1| 40S ribosomal protein S18 [Aspergillus niger CBS 513.88]
gi|134077510|emb|CAK96654.1| unnamed protein product [Aspergillus niger]
Length = 155
Score = 91.3 bits (225), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 40/64 (62%), Positives = 49/64 (76%)
Query: 30 QIVAIVGSPTQFSIPSWFLTRQKDVKDGKSPPVSANNLDSFWREDFERLKKMRLPRGLRP 89
+IV I+ SPTQ+ IP+WFL RQ+D+ DGK V +N+LDS RED ERLKK+R RGLR
Sbjct: 68 RIVTILQSPTQYKIPTWFLNRQRDITDGKDSQVVSNSLDSKIREDLERLKKIRSHRGLRH 127
Query: 90 YWGL 93
YWGL
Sbjct: 128 YWGL 131
>gi|291228799|ref|XP_002734364.1| PREDICTED: ribosomal protein S18-like [Saccoglossus kowalevskii]
Length = 184
Score = 90.9 bits (224), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 39/64 (60%), Positives = 48/64 (75%)
Query: 30 QIVAIVGSPTQFSIPSWFLTRQKDVKDGKSPPVSANNLDSFWREDFERLKKMRLPRGLRP 89
+++ I+ +P Q+ IP WFL RQKDVKDGK V ANNLD+ RED ER+KK+R RGLR
Sbjct: 98 KLITIMSNPRQYKIPDWFLNRQKDVKDGKYSQVLANNLDNKLREDLERMKKIRAHRGLRH 157
Query: 90 YWGL 93
YWGL
Sbjct: 158 YWGL 161
>gi|320587800|gb|EFX00275.1| 40S ribosomal protein s18 [Grosmannia clavigera kw1407]
Length = 156
Score = 90.9 bits (224), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 40/64 (62%), Positives = 49/64 (76%)
Query: 30 QIVAIVGSPTQFSIPSWFLTRQKDVKDGKSPPVSANNLDSFWREDFERLKKMRLPRGLRP 89
+IV+I+ SPTQ+ IPSWFL RQ+D+ DGK + AN +DS RED ERLKK+R RGLR
Sbjct: 68 RIVSILQSPTQYKIPSWFLNRQRDIVDGKDSQILANGVDSKLREDLERLKKIRSHRGLRH 127
Query: 90 YWGL 93
YWGL
Sbjct: 128 YWGL 131
>gi|188572482|gb|ACD65147.1| putative 40S ribosomal protein RPS18 [Phoronis muelleri]
Length = 152
Score = 90.5 bits (223), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 38/64 (59%), Positives = 48/64 (75%)
Query: 30 QIVAIVGSPTQFSIPSWFLTRQKDVKDGKSPPVSANNLDSFWREDFERLKKMRLPRGLRP 89
+++ I+ +P Q+ IP WFL RQKDVKDGK+ V +N LD+ RED ERLKK+R RGLR
Sbjct: 66 RVITIMSNPRQYKIPDWFLNRQKDVKDGKTSQVMSNGLDNKLREDLERLKKIRAHRGLRH 125
Query: 90 YWGL 93
YWGL
Sbjct: 126 YWGL 129
>gi|296809581|ref|XP_002845129.1| 40S ribosomal protein S18 [Arthroderma otae CBS 113480]
gi|238844612|gb|EEQ34274.1| 40S ribosomal protein S18 [Arthroderma otae CBS 113480]
Length = 155
Score = 90.5 bits (223), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 38/64 (59%), Positives = 48/64 (75%)
Query: 30 QIVAIVGSPTQFSIPSWFLTRQKDVKDGKSPPVSANNLDSFWREDFERLKKMRLPRGLRP 89
+IV I+ +PTQ+ IP+WFL RQ+D+ DGK V AN ++S RED ERLKK+R RGLR
Sbjct: 68 RIVTIIQNPTQYKIPTWFLNRQRDINDGKDSQVLANQMESKLREDLERLKKIRAHRGLRH 127
Query: 90 YWGL 93
YWGL
Sbjct: 128 YWGL 131
>gi|339474972|gb|EGP90064.1| hypothetical protein MYCGRDRAFT_55708 [Mycosphaerella graminicola
IPO323]
Length = 155
Score = 90.1 bits (222), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 40/64 (62%), Positives = 48/64 (75%)
Query: 30 QIVAIVGSPTQFSIPSWFLTRQKDVKDGKSPPVSANNLDSFWREDFERLKKMRLPRGLRP 89
+IV IV +PTQ+ IP+WFL RQ+D+ DGK V AN +DS RED ERLKK+R RGLR
Sbjct: 68 RIVTIVQNPTQYKIPTWFLNRQRDIVDGKDYQVLANGVDSKLREDLERLKKIRAHRGLRH 127
Query: 90 YWGL 93
YWGL
Sbjct: 128 YWGL 131
>gi|295668839|ref|XP_002794968.1| 40S ribosomal protein S18 [Paracoccidioides brasiliensis Pb01]
gi|226285661|gb|EEH41227.1| 40S ribosomal protein S18 [Paracoccidioides brasiliensis Pb01]
gi|226294814|gb|EEH50234.1| 40S ribosomal protein S18 [Paracoccidioides brasiliensis Pb18]
Length = 155
Score = 90.1 bits (222), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 38/64 (59%), Positives = 48/64 (75%)
Query: 30 QIVAIVGSPTQFSIPSWFLTRQKDVKDGKSPPVSANNLDSFWREDFERLKKMRLPRGLRP 89
+IV I+ +PTQ+ IP+WFL RQ+D+ DGK V AN ++S RED ERLKK+R RGLR
Sbjct: 68 RIVTIIQNPTQYKIPTWFLNRQRDITDGKDTQVLANQMESKLREDLERLKKIRAHRGLRH 127
Query: 90 YWGL 93
YWGL
Sbjct: 128 YWGL 131
>gi|154270985|ref|XP_001536346.1| 40S ribosomal protein S18 [Ajellomyces capsulatus NAm1]
gi|150409569|gb|EDN05013.1| 40S ribosomal protein S18 [Ajellomyces capsulatus NAm1]
gi|225555622|gb|EEH03913.1| 40S ribosomal protein S18 [Ajellomyces capsulatus G186AR]
gi|325091939|gb|EGC45249.1| 40S ribosomal protein S18 [Ajellomyces capsulatus H88]
Length = 155
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 38/64 (59%), Positives = 48/64 (75%)
Query: 30 QIVAIVGSPTQFSIPSWFLTRQKDVKDGKSPPVSANNLDSFWREDFERLKKMRLPRGLRP 89
+IV I+ +PTQ+ IP+WFL RQ+D+ DGK V AN ++S RED ERLKK+R RGLR
Sbjct: 68 RIVTIIQNPTQYKIPTWFLNRQRDITDGKDSQVLANQMESKLREDLERLKKIRAHRGLRH 127
Query: 90 YWGL 93
YWGL
Sbjct: 128 YWGL 131
>gi|261188787|ref|XP_002620807.1| ribosomal protein S13/S18 [Ajellomyces dermatitidis SLH14081]
gi|239592039|gb|EEQ74620.1| ribosomal protein S13/S18 [Ajellomyces dermatitidis SLH14081]
gi|239610306|gb|EEQ87293.1| 40S ribosomal protein S18 [Ajellomyces dermatitidis ER-3]
gi|327349270|gb|EGE78127.1| ribosomal protein S13p/S18e [Ajellomyces dermatitidis ATCC 18188]
Length = 155
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 38/64 (59%), Positives = 48/64 (75%)
Query: 30 QIVAIVGSPTQFSIPSWFLTRQKDVKDGKSPPVSANNLDSFWREDFERLKKMRLPRGLRP 89
+IV I+ +PTQ+ IP+WFL RQ+D+ DGK V AN ++S RED ERLKK+R RGLR
Sbjct: 68 RIVTIIQNPTQYKIPTWFLNRQRDITDGKDSQVLANQMESKLREDLERLKKIRAHRGLRH 127
Query: 90 YWGL 93
YWGL
Sbjct: 128 YWGL 131
>gi|67538542|ref|XP_663045.1| hypothetical protein AN5441.2 [Aspergillus nidulans FGSC A4]
gi|40743411|gb|EAA62601.1| conserved hypothetical protein [Aspergillus nidulans FGSC A4]
gi|259485111|tpe|CBF81904.1| TPA: ribosomal protein S13p/S18e (AFU_orthologue; AFUA_6G13550)
[Aspergillus nidulans FGSC A4]
Length = 155
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 39/64 (60%), Positives = 49/64 (76%)
Query: 30 QIVAIVGSPTQFSIPSWFLTRQKDVKDGKSPPVSANNLDSFWREDFERLKKMRLPRGLRP 89
+IV I+ +PTQ+ IP+WFL RQ+D+ DGK V +N LDS +RED ERLKK+R RGLR
Sbjct: 68 RIVTILQNPTQYKIPTWFLNRQRDIVDGKDYQVLSNGLDSKYREDLERLKKIRSHRGLRH 127
Query: 90 YWGL 93
YWGL
Sbjct: 128 YWGL 131
>gi|119473095|ref|XP_001258494.1| ribosomal protein S13p/S18e [Neosartorya fischeri NRRL 181]
gi|119406646|gb|EAW16597.1| ribosomal protein S13p/S18e [Neosartorya fischeri NRRL 181]
Length = 155
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/64 (62%), Positives = 48/64 (75%)
Query: 30 QIVAIVGSPTQFSIPSWFLTRQKDVKDGKSPPVSANNLDSFWREDFERLKKMRLPRGLRP 89
+IV I+ +PTQ+ IPSWFL RQ+D+ DGK V +N LDS RED ERLKK+R RGLR
Sbjct: 68 RIVTILQNPTQYKIPSWFLNRQRDIVDGKDSQVLSNGLDSKLREDLERLKKIRSHRGLRH 127
Query: 90 YWGL 93
YWGL
Sbjct: 128 YWGL 131
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
Posted date: Jul 22, 2011 4:42 PM
Number of letters in database: 5,058,227,080
Number of sequences in database: 14,777,732
Lambda K H
0.322 0.136 0.454
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 14777732
Number of Hits to DB: 830,257,342
Number of extensions: 26103333
Number of successful extensions: 50394
Number of sequences better than 10.0: 445
Number of HSP's gapped: 50543
Number of HSP's successfully gapped: 446
Length of query: 117
Length of database: 5,058,227,080
Length adjustment: 84
Effective length of query: 33
Effective length of database: 3,816,897,592
Effective search space: 125957620536
Effective search space used: 125957620536
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 76 (33.9 bits)