BLASTP 2.2.24 [Aug-08-2010]
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eten_7813_orf1
(114 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
14,777,732 sequences; 5,058,227,080 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|225423682|ref|XP_002277005.1| PREDICTED: hypothetical protein... 37 0.93
gi|225423684|ref|XP_002277047.1| PREDICTED: hypothetical protein... 37 1.0
gi|154287242|ref|XP_001544416.1| conserved hypothetical protein ... 35 2.5
gi|122114583|ref|NP_001073657.1| G protein-coupled receptor kina... 35 3.2
gi|331216574|ref|XP_003320966.1| hypothetical protein PGTG_02008... 35 5.1
gi|327271996|ref|XP_003220772.1| PREDICTED: histone H2A deubiqui... 34 5.6
>gi|225423682|ref|XP_002277005.1| PREDICTED: hypothetical protein isoform 1 [Vitis vinifera]
gi|297737977|emb|CBI27178.3| unnamed protein product [Vitis vinifera]
Length = 489
Score = 37.0 bits (84), Expect = 0.93, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 34/85 (40%), Gaps = 7/85 (8%)
Query: 3 VTFFSLQLFGGFECSNCGERGNWKLNCKLESELQIKSSNFPFLLRKAQNLLLKHQTVHAC 62
+ F L FEC +CGER N + ELQ + ++ +L Q V +
Sbjct: 50 IPHFRKILLSAFECPHCGERNN---EVQFAGELQPRGCSYSLHFSAGDQKMLNRQVVKSE 106
Query: 63 VALSPLPHR----PADRHCGVLAGV 83
A +P P + CG L+ V
Sbjct: 107 SATIKIPELDFEIPPEAQCGSLSTV 131
>gi|225423684|ref|XP_002277047.1| PREDICTED: hypothetical protein isoform 2 [Vitis vinifera]
Length = 494
Score = 37.0 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 34/85 (40%), Gaps = 7/85 (8%)
Query: 3 VTFFSLQLFGGFECSNCGERGNWKLNCKLESELQIKSSNFPFLLRKAQNLLLKHQTVHAC 62
+ F L FEC +CGER N + ELQ + ++ +L Q V +
Sbjct: 50 IPHFRKILLSAFECPHCGERNN---EVQFAGELQPRGCSYSLHFSAGDQKMLNRQVVKSE 106
Query: 63 VALSPLPHR----PADRHCGVLAGV 83
A +P P + CG L+ V
Sbjct: 107 SATIKIPELDFEIPPEAQCGSLSTV 131
>gi|154287242|ref|XP_001544416.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150408057|gb|EDN03598.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 527
Score = 35.4 bits (80), Expect = 2.5, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 7/72 (9%)
Query: 32 ESELQIKSSNFPFLLRKAQNLLLKHQTVHACVALSPLPHRPADRHCG-VLAGVPPGLVNH 90
E E Q++ +L K Q + ++ C+ PLPH+P V G+PP L++H
Sbjct: 365 EEEYQVEE-----ILEKRQRKNKPPEYLNICLLTPPLPHQPTHSPAHPVTKGIPPHLLSH 419
Query: 91 -SIFRGFEKSCS 101
S RG CS
Sbjct: 420 SSTVRGTRSPCS 431
>gi|122114583|ref|NP_001073657.1| G protein-coupled receptor kinase interacting ArfGAP 2 [Danio
rerio]
gi|120538643|gb|AAI29228.1| Zgc:158416 [Danio rerio]
Length = 736
Score = 35.4 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 26 KLNCKLESELQIKSSNFPFLLRKAQNLLLKHQTVHACVALSPLPHRPADRHCGVLA 81
K+NC L EL++ S L + NL K QT ++ V +PHR A R C ++
Sbjct: 450 KVNCHLSEELRLMQSKLNSLQNENSNL--KWQTPNSLVRPQDVPHRAAPRGCRAMS 503
>gi|331216574|ref|XP_003320966.1| hypothetical protein PGTG_02008 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309299956|gb|EFP76547.1| hypothetical protein PGTG_02008 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 437
Score = 34.7 bits (78), Expect = 5.1, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 28/67 (41%), Gaps = 21/67 (31%)
Query: 10 LFGGFECSNCGERGNWKLNCKLESELQIKSSNFPFLLRKAQNLLLKHQTVHACVALSPLP 69
+F G CS CG GNW+L+C LR+ NL H ++PLP
Sbjct: 376 IFTGKPCSYCGGLGNWRLSCP--------------RLRRDANLPPPH-------LVAPLP 414
Query: 70 HRPADRH 76
P RH
Sbjct: 415 VSPVKRH 421
>gi|327271996|ref|XP_003220772.1| PREDICTED: histone H2A deubiquitinase MYSM1-like [Anolis
carolinensis]
Length = 820
Score = 34.3 bits (77), Expect = 5.6, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 31/55 (56%)
Query: 23 GNWKLNCKLESELQIKSSNFPFLLRKAQNLLLKHQTVHACVALSPLPHRPADRHC 77
G+++L K E + ++ + +L K + ++ K++ H+CV + + HR +D C
Sbjct: 709 GSYRLPYKFEVQEMLEEPQWELVLEKTRWIIEKYRLSHSCVPMDKIFHRDSDLTC 763
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
Posted date: Jul 22, 2011 4:42 PM
Number of letters in database: 5,058,227,080
Number of sequences in database: 14,777,732
Lambda K H
0.325 0.140 0.457
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 14777732
Number of Hits to DB: 1,053,476,125
Number of extensions: 37296739
Number of successful extensions: 115632
Number of sequences better than 10.0: 8
Number of HSP's gapped: 116146
Number of HSP's successfully gapped: 8
Length of query: 114
Length of database: 5,058,227,080
Length adjustment: 81
Effective length of query: 33
Effective length of database: 3,861,230,788
Effective search space: 127420616004
Effective search space used: 127420616004
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 76 (33.9 bits)